| MUC4 | Q99102 | PYDC2-201 | ENST00000518817 | 294 nt | APPRIS P1 BASIC | 4.31 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | AC130365.2-201 | ENST00000525882 | 1201 nt | BASIC | 4.31 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | AC068305.2-201 | ENST00000550567 | 1205 nt | BASIC | 4.31 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | ULK4P1-201 | ENST00000564495 | 875 nt | TSL 1 (best) BASIC | 4.31 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | AC103808.4-201 | ENST00000577258 | 391 nt | TSL 3 BASIC | 4.31 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | AC008507.3-201 | ENST00000585753 | 472 nt | BASIC | 4.31 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | AC008280.3-201 | ENST00000606436 | 732 nt | TSL 5 BASIC | 4.31 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | AC116651.1-201 | ENST00000609724 | 556 nt | BASIC | 4.31 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | CASC19-222 | ENST00000641321 | 1173 nt | BASIC | 4.31 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | C11orf65-208 | ENST00000615746 | 2711 nt | APPRIS P1 TSL 1 (best) BASIC | 4.31 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | MAPRE2-202 | ENST00000413393 | 4173 nt | APPRIS ALT1 TSL 5 BASIC | 4.31 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | LINC00891-201 | ENST00000627173 | 4113 nt | TSL 2 BASIC | 4.31 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | BBIP1-207 | ENST00000448814 | 2119 nt | TSL 1 (best) BASIC | 4.31 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | MAPRE2-211 | ENST00000589699 | 4080 nt | APPRIS ALT1 TSL 2 BASIC | 4.31 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | OR2AG1-202 | ENST00000641258 | 6993 nt | APPRIS P1 BASIC | 4.31 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | PCDH11X-206 | ENST00000373097 | 9146 nt | APPRIS ALT2 TSL 1 (best) BASIC | 4.31 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | AC018628.1-201 | ENST00000624147 | 3819 nt | BASIC | 4.31 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | LINC02421-201 | ENST00000542219 | 3135 nt | TSL 1 (best) BASIC | 4.31 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | AC015971.1-203 | ENST00000426549 | 1948 nt | TSL 1 (best) BASIC | 4.31 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | ARHGAP5-210 | ENST00000556611 | 4824 nt | APPRIS ALT1 TSL 5 BASIC | 4.31 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | EYA3-204 | ENST00000436342 | 5943 nt | TSL 2 BASIC | 4.31 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | SREK1-203 | ENST00000380918 | 2433 nt | TSL 1 (best) BASIC | 4.31 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | RNA5SP375-201 | ENST00000362975 | 119 nt | BASIC | 4.31 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | RN7SKP115-201 | ENST00000363177 | 317 nt | BASIC | 4.31 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | AC117402.1-202 | ENST00000383686 | 820 nt | TSL 2 BASIC | 4.31 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | RPL7P58-201 | ENST00000402913 | 758 nt | BASIC | 4.31 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | AL162727.2-201 | ENST00000428429 | 395 nt | TSL 3 BASIC | 4.31 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | GAPDHP75-201 | ENST00000433910 | 943 nt | BASIC | 4.31 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | AC009487.1-201 | ENST00000444164 | 403 nt | TSL 3 BASIC | 4.31 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | AC013549.1-201 | ENST00000454086 | 566 nt | TSL 3 BASIC | 4.31 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | RPSAP39-201 | ENST00000467439 | 883 nt | BASIC | 4.31 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | MGC32805-204 | ENST00000509993 | 783 nt | TSL 2 BASIC | 4.31 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | AC097173.2-201 | ENST00000518701 | 474 nt | TSL 3 BASIC | 4.31 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | AC136777.2-201 | ENST00000522979 | 358 nt | BASIC | 4.31 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | AC110056.1-201 | ENST00000525759 | 911 nt | BASIC | 4.31 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | AP003037.1-201 | ENST00000537594 | 267 nt | TSL 5 BASIC | 4.31 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | RNU4ATAC-201 | ENST00000580972 | 127 nt | BASIC | 4.31 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | MIR1273E-201 | ENST00000581165 | 102 nt | BASIC | 4.31 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | ZNF230-204 | ENST00000585632 | 579 nt | TSL 2 BASIC | 4.31 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | AC100767.2-201 | ENST00000604840 | 693 nt | BASIC | 4.31 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | AL161457.2-204 | ENST00000609241 | 869 nt | TSL 5 BASIC | 4.31 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | MIR6826-201 | ENST00000617808 | 98 nt | BASIC | 4.31 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | AC018445.2-201 | ENST00000622987 | 260 nt | BASIC | 4.31 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | LRRC37A3-202 | ENST00000334962 | 2654 nt | TSL 1 (best) BASIC | 4.31 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | MTRNR2L3-201 | ENST00000543500 | 1539 nt | APPRIS P1 BASIC | 4.31 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | LARP7-210 | ENST00000509061 | 2332 nt | TSL 1 (best) BASIC | 4.31 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | AC006288.1-201 | ENST00000565320 | 1463 nt | TSL 3 BASIC | 4.31 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | FABP2-201 | ENST00000274024 | 2478 nt | APPRIS P1 TSL 1 (best) BASIC | 4.31 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | MIR4500HG-201 | ENST00000436290 | 1675 nt | TSL 1 (best) BASIC | 4.31 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | ANKRD31-201 | ENST00000274361 | 6036 nt | APPRIS P2 TSL 5 BASIC | 4.31 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | NOL8-214 | ENST00000535387 | 3390 nt | APPRIS ALT2 TSL 5 BASIC | 4.31 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | NDRG3-201 | ENST00000349004 | 2964 nt | APPRIS P4 TSL 1 (best) BASIC | 4.3 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | NRCAM-210 | ENST00000425651 | 3915 nt | APPRIS ALT2 TSL 1 (best) BASIC | 4.3 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | OR11H1-201 | ENST00000252835 | 982 nt | APPRIS P1 BASIC | 4.3 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | SSX3-201 | ENST00000298396 | 1232 nt | APPRIS P1 TSL 1 (best) BASIC | 4.3 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | MIR143-201 | ENST00000385300 | 106 nt | BASIC | 4.3 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | AL096829.1-201 | ENST00000413677 | 457 nt | BASIC | 4.3 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | RPS3AP38-201 | ENST00000435889 | 763 nt | BASIC | 4.3 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | AC104164.1-201 | ENST00000460282 | 590 nt | BASIC | 4.3 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | SYPL1-205 | ENST00000470347 | 1193 nt | TSL 3 BASIC | 4.3 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | AC083795.1-201 | ENST00000491760 | 320 nt | BASIC | 4.3 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | AC011396.3-201 | ENST00000508845 | 512 nt | TSL 3 BASIC | 4.3 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | AC114781.3-201 | ENST00000512083 | 142 nt | BASIC | 4.3 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | AC104212.3-201 | ENST00000522044 | 444 nt | TSL 3 BASIC | 4.3 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | ASB8-202 | ENST00000535055 | 657 nt | TSL 2 BASIC | 4.3 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | AP000763.3-201 | ENST00000542598 | 334 nt | TSL 5 BASIC | 4.3 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | C8orf59-206 | ENST00000545322 | 491 nt | TSL 3 BASIC | 4.3 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | AL157871.6-201 | ENST00000553954 | 206 nt | TSL 2 BASIC | 4.3 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | AL355075.2-201 | ENST00000555435 | 478 nt | TSL 2 BASIC | 4.3 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | OR11H2-201 | ENST00000556246 | 948 nt | APPRIS P1 BASIC | 4.3 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | LINC01895-201 | ENST00000558690 | 404 nt | TSL 5 BASIC | 4.3 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | AL163952.1-202 | ENST00000569625 | 600 nt | BASIC | 4.3 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | LINC00907-202 | ENST00000585639 | 915 nt | TSL 1 (best) BASIC | 4.3 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | LINC01533-201 | ENST00000585739 | 616 nt | TSL 5 BASIC | 4.3 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | SUMO2P15-201 | ENST00000604285 | 278 nt | BASIC | 4.3 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | PCBP1-AS1-282 | ENST00000625783 | 826 nt | TSL 5 BASIC | 4.3 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | ZNF224-201 | ENST00000336976 | 3980 nt | APPRIS P1 TSL 1 (best) BASIC | 4.3 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | AC012254.3-201 | ENST00000591183 | 2117 nt | BASIC | 4.3 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | MEF2C-249 | ENST00000637481 | 6088 nt | TSL 5 BASIC | 4.3 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | TRIP12-204 | ENST00000389045 | 5355 nt | APPRIS ALT2 TSL 1 (best) BASIC | 4.3 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | ZNF559-201 | ENST00000317221 | 2732 nt | TSL 2 BASIC | 4.3 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | LAMTOR3-202 | ENST00000499666 | 4226 nt | APPRIS P1 TSL 1 (best) BASIC | 4.3 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | APBB2-230 | ENST00000543538 | 6992 nt | TSL 5 BASIC | 4.3 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | DYRK1A-202 | ENST00000339659 | 8654 nt | TSL 1 (best) BASIC | 4.3 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | ATF2-202 | ENST00000345739 | 4079 nt | TSL 1 (best) BASIC | 4.3 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | CCAT2-201 | ENST00000630920 | 1752 nt | BASIC | 4.3 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | KDM4C-214 | ENST00000536108 | 3406 nt | TSL 1 (best) BASIC | 4.3 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | AL449283.1-201 | ENST00000602631 | 3403 nt | BASIC | 4.3 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | ASB14-201 | ENST00000389601 | 3175 nt | APPRIS ALT2 TSL 5 BASIC | 4.3 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | MAK-204 | ENST00000536370 | 3767 nt | TSL 1 (best) BASIC | 4.3 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | AC004076.2-201 | ENST00000620532 | 3323 nt | BASIC | 4.3 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | AF127577.4-201 | ENST00000432230 | 5929 nt | TSL 5 BASIC | 4.3 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | AL160286.3-201 | ENST00000569644 | 3294 nt | TSL 2 BASIC | 4.3 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | IPCEF1-202 | ENST00000367220 | 1658 nt | APPRIS ALT2 TSL 2 BASIC | 4.3 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | AL096711.1-201 | ENST00000404780 | 554 nt | BASIC | 4.3 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | LINC01829-201 | ENST00000414404 | 571 nt | TSL 2 BASIC | 4.3 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | LINC01501-201 | ENST00000427523 | 409 nt | TSL 3 BASIC | 4.3 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | AL606534.1-201 | ENST00000439562 | 694 nt | TSL 3 BASIC | 4.3 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | NDUFAF4P2-201 | ENST00000445374 | 520 nt | BASIC | 4.3 | □□□□□ -1.72 | | |
| MUC4 | Q99102 | AC034228.3-201 | ENST00000446275 | 562 nt | TSL 3 BASIC | 4.3 | □□□□□ -1.72 | | |