Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
VRK3Q8IV63 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
VRK3Q8IV63 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
VRK3Q8IV63 FUNDC2P3-201ENST00000334716 533 ntBASIC6.11□□□□□ -1.43
VRK3Q8IV63 RNA5SP279-201ENST00000365513 117 ntBASIC6.11□□□□□ -1.43
VRK3Q8IV63 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
VRK3Q8IV63 MIR188-201ENST00000385034 86 ntBASIC6.11□□□□□ -1.43
VRK3Q8IV63 ATP5F1P2-201ENST00000398143 760 ntBASIC6.11□□□□□ -1.43
VRK3Q8IV63 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.11□□□□□ -1.43
VRK3Q8IV63 AL035422.1-201ENST00000414193 397 ntBASIC6.11□□□□□ -1.43
VRK3Q8IV63 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC6.11□□□□□ -1.43
VRK3Q8IV63 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
VRK3Q8IV63 USP9YP11-201ENST00000427537 717 ntBASIC6.11□□□□□ -1.43
VRK3Q8IV63 NPM1P48-201ENST00000436002 853 ntBASIC6.11□□□□□ -1.43
VRK3Q8IV63 AC016908.1-201ENST00000442571 1219 ntBASIC6.11□□□□□ -1.43
VRK3Q8IV63 Z73417.1-201ENST00000447373 778 ntBASIC6.11□□□□□ -1.43
VRK3Q8IV63 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC6.11□□□□□ -1.43
VRK3Q8IV63 AC073594.1-201ENST00000462065 364 ntBASIC6.11□□□□□ -1.43
VRK3Q8IV63 AC005017.1-201ENST00000482002 490 ntBASIC6.11□□□□□ -1.43
VRK3Q8IV63 AC116562.1-201ENST00000485355 781 ntBASIC6.11□□□□□ -1.43
VRK3Q8IV63 RPL34P33-201ENST00000486062 334 ntBASIC6.11□□□□□ -1.43
VRK3Q8IV63 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC6.11□□□□□ -1.43
VRK3Q8IV63 PANCR-201ENST00000503456 493 ntTSL 5 BASIC6.11□□□□□ -1.43
VRK3Q8IV63 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC6.11□□□□□ -1.43
VRK3Q8IV63 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC6.11□□□□□ -1.43
VRK3Q8IV63 RNA5SP441-201ENST00000516809 88 ntBASIC6.11□□□□□ -1.43
VRK3Q8IV63 AP003066.2-201ENST00000529375 555 ntBASIC6.11□□□□□ -1.43
VRK3Q8IV63 OR4A41P-201ENST00000533053 928 ntBASIC6.11□□□□□ -1.43
VRK3Q8IV63 OR4A40P-201ENST00000533878 948 ntBASIC6.11□□□□□ -1.43
VRK3Q8IV63 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC6.11□□□□□ -1.43
VRK3Q8IV63 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.11□□□□□ -1.43
VRK3Q8IV63 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC6.11□□□□□ -1.43
VRK3Q8IV63 OR4H6P-201ENST00000563771 921 ntBASIC6.11□□□□□ -1.43
VRK3Q8IV63 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC6.11□□□□□ -1.43
VRK3Q8IV63 AC090666.1-201ENST00000578241 445 ntBASIC6.11□□□□□ -1.43
VRK3Q8IV63 NPIPB1P-202ENST00000588786 828 ntBASIC6.11□□□□□ -1.43
VRK3Q8IV63 PCNAP1-202ENST00000595299 752 ntBASIC6.11□□□□□ -1.43
VRK3Q8IV63 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC6.11□□□□□ -1.43
VRK3Q8IV63 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
VRK3Q8IV63 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC6.11□□□□□ -1.43
VRK3Q8IV63 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.11□□□□□ -1.43
VRK3Q8IV63 SNORA74.4-201ENST00000607595 199 ntBASIC6.11□□□□□ -1.43
VRK3Q8IV63 AC112503.1-201ENST00000608436 391 ntBASIC6.11□□□□□ -1.43
VRK3Q8IV63 AC084036.1-201ENST00000609190 508 ntBASIC6.11□□□□□ -1.43
VRK3Q8IV63 AC008759.3-201ENST00000613300 508 ntBASIC6.11□□□□□ -1.43
VRK3Q8IV63 AC008115.4-201ENST00000619780 775 ntBASIC6.11□□□□□ -1.43
VRK3Q8IV63 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC6.11□□□□□ -1.43
VRK3Q8IV63 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC6.11□□□□□ -1.43
VRK3Q8IV63 CASC19-222ENST00000641321 1173 ntBASIC6.11□□□□□ -1.43
VRK3Q8IV63 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC6.11□□□□□ -1.43
VRK3Q8IV63 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.11□□□□□ -1.43
VRK3Q8IV63 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
VRK3Q8IV63 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
VRK3Q8IV63 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC6.11□□□□□ -1.43
VRK3Q8IV63 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.11□□□□□ -1.43
VRK3Q8IV63 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.11□□□□□ -1.43
VRK3Q8IV63 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
VRK3Q8IV63 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.11□□□□□ -1.43
VRK3Q8IV63 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
VRK3Q8IV63 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.11□□□□□ -1.43
VRK3Q8IV63 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
VRK3Q8IV63 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
VRK3Q8IV63 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
VRK3Q8IV63 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.1□□□□□ -1.43
VRK3Q8IV63 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
VRK3Q8IV63 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.1□□□□□ -1.43
VRK3Q8IV63 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
VRK3Q8IV63 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
VRK3Q8IV63 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.1□□□□□ -1.43
VRK3Q8IV63 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
VRK3Q8IV63 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
VRK3Q8IV63 PPBPP2-201ENST00000513150 1362 ntBASIC6.1□□□□□ -1.43
VRK3Q8IV63 EEF1A1P9-201ENST00000514975 1383 ntBASIC6.1□□□□□ -1.43
VRK3Q8IV63 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.1□□□□□ -1.43
VRK3Q8IV63 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
VRK3Q8IV63 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
VRK3Q8IV63 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
VRK3Q8IV63 AC096921.2-201ENST00000561507 1916 ntBASIC6.1□□□□□ -1.43
VRK3Q8IV63 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
VRK3Q8IV63 SNORD8-201ENST00000363915 110 ntBASIC6.1□□□□□ -1.43
VRK3Q8IV63 SNORA43.1-201ENST00000364863 140 ntBASIC6.1□□□□□ -1.43
VRK3Q8IV63 AP003170.5-201ENST00000397185 335 ntBASIC6.1□□□□□ -1.43
VRK3Q8IV63 MTND4LP17-201ENST00000414607 293 ntBASIC6.1□□□□□ -1.43
VRK3Q8IV63 AL031779.1-201ENST00000415663 330 ntBASIC6.1□□□□□ -1.43
VRK3Q8IV63 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC6.1□□□□□ -1.43
VRK3Q8IV63 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC6.1□□□□□ -1.43
VRK3Q8IV63 AC016907.1-201ENST00000419483 435 ntBASIC6.1□□□□□ -1.43
VRK3Q8IV63 AJ239321.1-201ENST00000424255 564 ntBASIC6.1□□□□□ -1.43
VRK3Q8IV63 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC6.1□□□□□ -1.43
VRK3Q8IV63 AL139158.1-201ENST00000424719 340 ntBASIC6.1□□□□□ -1.43
VRK3Q8IV63 PPIAP10-201ENST00000438675 458 ntBASIC6.1□□□□□ -1.43
VRK3Q8IV63 AC245047.2-201ENST00000441060 530 ntBASIC6.1□□□□□ -1.43
VRK3Q8IV63 AC069540.1-201ENST00000446320 988 ntBASIC6.1□□□□□ -1.43
VRK3Q8IV63 EXOSC3P1-201ENST00000448649 500 ntBASIC6.1□□□□□ -1.43
VRK3Q8IV63 HIGD1AP16-201ENST00000450986 258 ntBASIC6.1□□□□□ -1.43
VRK3Q8IV63 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC6.1□□□□□ -1.43
VRK3Q8IV63 RPL7P61-201ENST00000451721 751 ntBASIC6.1□□□□□ -1.43
VRK3Q8IV63 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC6.1□□□□□ -1.43
VRK3Q8IV63 NPM1P17-201ENST00000479221 602 ntBASIC6.1□□□□□ -1.43
VRK3Q8IV63 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 122.1 ms