Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 MIR4509-1-201ENST00000618224 94 ntBASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 AC015660.5-201ENST00000623238 564 ntBASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.77□□□□□ -1.48
PTCHD4Q6ZW05 Z83820.1-201ENST00000456978 1499 ntBASIC5.77□□□□□ -1.49
PTCHD4Q6ZW05 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PTCHD4Q6ZW05 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.77□□□□□ -1.49
PTCHD4Q6ZW05 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
PTCHD4Q6ZW05 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PTCHD4Q6ZW05 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
PTCHD4Q6ZW05 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
PTCHD4Q6ZW05 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PTCHD4Q6ZW05 AC020656.2-201ENST00000613291 5309 ntBASIC5.77□□□□□ -1.49
PTCHD4Q6ZW05 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC5.77□□□□□ -1.49
PTCHD4Q6ZW05 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
PTCHD4Q6ZW05 OR56A4-201ENST00000330728 1209 ntBASIC5.77□□□□□ -1.49
PTCHD4Q6ZW05 RNA5SP140-201ENST00000364524 92 ntBASIC5.77□□□□□ -1.49
PTCHD4Q6ZW05 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
PTCHD4Q6ZW05 MIR433-201ENST00000384837 93 ntBASIC5.77□□□□□ -1.49
PTCHD4Q6ZW05 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.77□□□□□ -1.49
PTCHD4Q6ZW05 ANAPC10P1-201ENST00000395991 556 ntBASIC5.77□□□□□ -1.49
PTCHD4Q6ZW05 FDPSP5-201ENST00000399474 1057 ntBASIC5.77□□□□□ -1.49
PTCHD4Q6ZW05 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC5.77□□□□□ -1.49
PTCHD4Q6ZW05 LSM5-206ENST00000409987 504 ntTSL 5 BASIC5.77□□□□□ -1.49
PTCHD4Q6ZW05 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PTCHD4Q6ZW05 AL132671.1-201ENST00000415736 308 ntTSL 3 BASIC5.77□□□□□ -1.49
PTCHD4Q6ZW05 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC5.77□□□□□ -1.49
PTCHD4Q6ZW05 MTCO1P51-201ENST00000427672 1060 ntBASIC5.77□□□□□ -1.49
PTCHD4Q6ZW05 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC5.77□□□□□ -1.49
PTCHD4Q6ZW05 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
PTCHD4Q6ZW05 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC5.77□□□□□ -1.49
PTCHD4Q6ZW05 AC083855.1-201ENST00000440041 258 ntBASIC5.77□□□□□ -1.49
PTCHD4Q6ZW05 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC5.77□□□□□ -1.49
PTCHD4Q6ZW05 CYCSP51-201ENST00000443545 318 ntBASIC5.77□□□□□ -1.49
PTCHD4Q6ZW05 RPL7P33-201ENST00000444159 742 ntBASIC5.77□□□□□ -1.49
PTCHD4Q6ZW05 AL158214.1-201ENST00000444423 404 ntBASIC5.77□□□□□ -1.49
PTCHD4Q6ZW05 AL009048.1-201ENST00000450437 298 ntBASIC5.77□□□□□ -1.49
PTCHD4Q6ZW05 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC5.77□□□□□ -1.49
PTCHD4Q6ZW05 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.77□□□□□ -1.49
PTCHD4Q6ZW05 VPS25P1-201ENST00000455691 508 ntBASIC5.77□□□□□ -1.49
PTCHD4Q6ZW05 AL133480.2-201ENST00000456723 487 ntBASIC5.77□□□□□ -1.49
PTCHD4Q6ZW05 snoU13.29-201ENST00000459370 104 ntBASIC5.77□□□□□ -1.49
PTCHD4Q6ZW05 AC090568.1-201ENST00000509499 856 ntBASIC5.77□□□□□ -1.49
PTCHD4Q6ZW05 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC5.77□□□□□ -1.49
PTCHD4Q6ZW05 RN7SKP265-201ENST00000516448 223 ntBASIC5.77□□□□□ -1.49
PTCHD4Q6ZW05 RNA5SP400-201ENST00000517155 111 ntBASIC5.77□□□□□ -1.49
PTCHD4Q6ZW05 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC5.77□□□□□ -1.49
PTCHD4Q6ZW05 MTND2P38-201ENST00000522536 667 ntBASIC5.77□□□□□ -1.49
PTCHD4Q6ZW05 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.77□□□□□ -1.49
PTCHD4Q6ZW05 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC5.77□□□□□ -1.49
PTCHD4Q6ZW05 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PTCHD4Q6ZW05 ACYP1-204ENST00000555135 639 ntTSL 3 BASIC5.77□□□□□ -1.49
PTCHD4Q6ZW05 AC026956.1-201ENST00000558741 396 ntBASIC5.77□□□□□ -1.49
PTCHD4Q6ZW05 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC5.77□□□□□ -1.49
PTCHD4Q6ZW05 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC5.77□□□□□ -1.49
PTCHD4Q6ZW05 AC005726.4-201ENST00000582858 458 ntBASIC5.77□□□□□ -1.49
PTCHD4Q6ZW05 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC5.77□□□□□ -1.49
PTCHD4Q6ZW05 AL008723.3-201ENST00000608926 449 ntBASIC5.77□□□□□ -1.49
PTCHD4Q6ZW05 AC124016.2-201ENST00000610058 665 ntBASIC5.77□□□□□ -1.49
PTCHD4Q6ZW05 RNU6-1192P-201ENST00000612197 107 ntBASIC5.77□□□□□ -1.49
PTCHD4Q6ZW05 AC078880.5-201ENST00000617845 421 ntBASIC5.77□□□□□ -1.49
PTCHD4Q6ZW05 RNU6-489P-201ENST00000618289 107 ntBASIC5.77□□□□□ -1.49
PTCHD4Q6ZW05 AL133370.2-201ENST00000619934 439 ntBASIC5.77□□□□□ -1.49
PTCHD4Q6ZW05 AC069234.4-201ENST00000621276 412 ntBASIC5.77□□□□□ -1.49
PTCHD4Q6ZW05 AC005514.1-201ENST00000623521 208 ntBASIC5.77□□□□□ -1.49
PTCHD4Q6ZW05 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
PTCHD4Q6ZW05 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
PTCHD4Q6ZW05 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PTCHD4Q6ZW05 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PTCHD4Q6ZW05 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PTCHD4Q6ZW05 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.77□□□□□ -1.49
PTCHD4Q6ZW05 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PTCHD4Q6ZW05 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PTCHD4Q6ZW05 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.77□□□□□ -1.49
PTCHD4Q6ZW05 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.77□□□□□ -1.49
PTCHD4Q6ZW05 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PTCHD4Q6ZW05 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.77□□□□□ -1.49
PTCHD4Q6ZW05 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PTCHD4Q6ZW05 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
PTCHD4Q6ZW05 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.77□□□□□ -1.49
PTCHD4Q6ZW05 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PTCHD4Q6ZW05 GUCY1B2-204ENST00000531898 1979 ntBASIC5.76□□□□□ -1.49
PTCHD4Q6ZW05 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PTCHD4Q6ZW05 AP005432.1-201ENST00000580891 3485 ntBASIC5.76□□□□□ -1.49
PTCHD4Q6ZW05 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.76□□□□□ -1.49
PTCHD4Q6ZW05 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
PTCHD4Q6ZW05 AC096921.2-201ENST00000561507 1916 ntBASIC5.76□□□□□ -1.49
PTCHD4Q6ZW05 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
PTCHD4Q6ZW05 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms