Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.48□□□□□ -1.69
HIST1H1AQ02539 AC104164.1-201ENST00000460282 590 ntBASIC4.48□□□□□ -1.69
HIST1H1AQ02539 RN7SL197P-201ENST00000466981 299 ntBASIC4.48□□□□□ -1.69
HIST1H1AQ02539 RPL29P23-201ENST00000486188 442 ntBASIC4.48□□□□□ -1.69
HIST1H1AQ02539 HMGN1P16-201ENST00000508308 283 ntBASIC4.48□□□□□ -1.69
HIST1H1AQ02539 MAST4-IT1-201ENST00000514241 658 ntBASIC4.48□□□□□ -1.69
HIST1H1AQ02539 RNA5SP441-201ENST00000516809 88 ntBASIC4.48□□□□□ -1.69
HIST1H1AQ02539 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.48□□□□□ -1.69
HIST1H1AQ02539 AC130365.2-201ENST00000525882 1201 ntBASIC4.48□□□□□ -1.69
HIST1H1AQ02539 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC4.48□□□□□ -1.69
HIST1H1AQ02539 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC4.48□□□□□ -1.69
HIST1H1AQ02539 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
HIST1H1AQ02539 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC4.48□□□□□ -1.69
HIST1H1AQ02539 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC4.48□□□□□ -1.69
HIST1H1AQ02539 ZNF322P1-201ENST00000568013 1209 ntBASIC4.48□□□□□ -1.69
HIST1H1AQ02539 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HIST1H1AQ02539 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC4.48□□□□□ -1.69
HIST1H1AQ02539 AC073333.2-201ENST00000603589 769 ntBASIC4.48□□□□□ -1.69
HIST1H1AQ02539 AC005899.6-201ENST00000620729 297 ntBASIC4.48□□□□□ -1.69
HIST1H1AQ02539 MIR6823-201ENST00000622118 61 ntBASIC4.48□□□□□ -1.69
HIST1H1AQ02539 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC4.48□□□□□ -1.69
HIST1H1AQ02539 UGP2-232ENST00000640075 567 ntTSL 5 BASIC4.48□□□□□ -1.69
HIST1H1AQ02539 AC104260.2-201ENST00000623551 3497 ntBASIC4.48□□□□□ -1.69
HIST1H1AQ02539 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HIST1H1AQ02539 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
HIST1H1AQ02539 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HIST1H1AQ02539 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
HIST1H1AQ02539 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC4.48□□□□□ -1.69
HIST1H1AQ02539 USP40-202ENST00000409945 1946 ntTSL 2 BASIC4.48□□□□□ -1.69
HIST1H1AQ02539 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC4.48□□□□□ -1.69
HIST1H1AQ02539 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HIST1H1AQ02539 AC018809.2-201ENST00000602436 3823 ntBASIC4.48□□□□□ -1.69
HIST1H1AQ02539 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HIST1H1AQ02539 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC4.48□□□□□ -1.69
HIST1H1AQ02539 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
HIST1H1AQ02539 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
HIST1H1AQ02539 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC4.47□□□□□ -1.69
HIST1H1AQ02539 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HIST1H1AQ02539 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HIST1H1AQ02539 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
HIST1H1AQ02539 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HIST1H1AQ02539 SNORA21-201ENST00000362423 132 ntBASIC4.47□□□□□ -1.69
HIST1H1AQ02539 U3.7-201ENST00000363668 216 ntBASIC4.47□□□□□ -1.69
HIST1H1AQ02539 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC4.47□□□□□ -1.69
HIST1H1AQ02539 MIR191-201ENST00000384873 92 ntBASIC4.47□□□□□ -1.69
HIST1H1AQ02539 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HIST1H1AQ02539 AC092865.3-201ENST00000425390 1026 ntBASIC4.47□□□□□ -1.69
HIST1H1AQ02539 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC4.47□□□□□ -1.69
HIST1H1AQ02539 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.47□□□□□ -1.69
HIST1H1AQ02539 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC4.47□□□□□ -1.69
HIST1H1AQ02539 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC4.47□□□□□ -1.69
HIST1H1AQ02539 AC064862.5-201ENST00000440618 334 ntBASIC4.47□□□□□ -1.69
HIST1H1AQ02539 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC4.47□□□□□ -1.69
HIST1H1AQ02539 AL590004.3-202ENST00000445883 451 ntBASIC4.47□□□□□ -1.69
HIST1H1AQ02539 FTLP8-201ENST00000446770 267 ntBASIC4.47□□□□□ -1.69
HIST1H1AQ02539 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC4.47□□□□□ -1.69
HIST1H1AQ02539 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HIST1H1AQ02539 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC4.47□□□□□ -1.69
HIST1H1AQ02539 CEACAMP11-201ENST00000455211 583 ntBASIC4.47□□□□□ -1.69
HIST1H1AQ02539 PFN1P6-201ENST00000476786 399 ntBASIC4.47□□□□□ -1.69
HIST1H1AQ02539 OR7E22P-201ENST00000478335 1035 ntBASIC4.47□□□□□ -1.69
HIST1H1AQ02539 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC4.47□□□□□ -1.69
HIST1H1AQ02539 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.47□□□□□ -1.69
HIST1H1AQ02539 COX6B1P2-201ENST00000489624 230 ntBASIC4.47□□□□□ -1.69
HIST1H1AQ02539 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HIST1H1AQ02539 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.47□□□□□ -1.69
HIST1H1AQ02539 CR383658.1-201ENST00000514609 734 ntBASIC4.47□□□□□ -1.69
HIST1H1AQ02539 RNU6-1334P-201ENST00000516032 105 ntBASIC4.47□□□□□ -1.69
HIST1H1AQ02539 RNA5SP434-201ENST00000516647 121 ntBASIC4.47□□□□□ -1.69
HIST1H1AQ02539 CASP5-209ENST00000531367 879 ntTSL 5 BASIC4.47□□□□□ -1.69
HIST1H1AQ02539 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.47□□□□□ -1.69
HIST1H1AQ02539 AL121594.2-201ENST00000541658 472 ntBASIC4.47□□□□□ -1.69
HIST1H1AQ02539 AC084824.2-201ENST00000548906 345 ntBASIC4.47□□□□□ -1.69
HIST1H1AQ02539 MT1CP-201ENST00000567054 174 ntBASIC4.47□□□□□ -1.69
HIST1H1AQ02539 MRPS21P8-201ENST00000569196 235 ntBASIC4.47□□□□□ -1.69
HIST1H1AQ02539 AC007346.1-201ENST00000569208 867 ntBASIC4.47□□□□□ -1.69
HIST1H1AQ02539 AC090826.1-203ENST00000569235 490 ntBASIC4.47□□□□□ -1.69
HIST1H1AQ02539 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC4.47□□□□□ -1.69
HIST1H1AQ02539 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC4.47□□□□□ -1.69
HIST1H1AQ02539 RN7SL230P-201ENST00000580835 303 ntBASIC4.47□□□□□ -1.69
HIST1H1AQ02539 AC012254.3-201ENST00000591183 2117 ntBASIC4.47□□□□□ -1.69
HIST1H1AQ02539 WBP1LP12-201ENST00000604449 331 ntBASIC4.47□□□□□ -1.69
HIST1H1AQ02539 NQO2-209ENST00000606474 470 ntTSL 3 BASIC4.47□□□□□ -1.69
HIST1H1AQ02539 AL133481.2-203ENST00000607558 139 ntBASIC4.47□□□□□ -1.69
HIST1H1AQ02539 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HIST1H1AQ02539 AL135999.3-201ENST00000610501 812 ntBASIC4.47□□□□□ -1.69
HIST1H1AQ02539 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HIST1H1AQ02539 AL512652.1-201ENST00000619006 500 ntBASIC4.47□□□□□ -1.69
HIST1H1AQ02539 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC4.47□□□□□ -1.69
HIST1H1AQ02539 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC4.47□□□□□ -1.69
HIST1H1AQ02539 AC092376.2-201ENST00000622621 4116 ntBASIC4.47□□□□□ -1.69
HIST1H1AQ02539 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HIST1H1AQ02539 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
HIST1H1AQ02539 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HIST1H1AQ02539 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC4.47□□□□□ -1.69
HIST1H1AQ02539 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC4.47□□□□□ -1.69
HIST1H1AQ02539 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.47□□□□□ -1.69
HIST1H1AQ02539 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
HIST1H1AQ02539 AC130304.1-201ENST00000622942 2385 ntBASIC4.47□□□□□ -1.69
HIST1H1AQ02539 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms