Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 AL353684.1-201ENST00000622677 1120 ntBASIC5.2□□□□□ -1.58
H3F3AP84243 AP000550.3-201ENST00000637734 379 ntBASIC5.2□□□□□ -1.58
H3F3AP84243 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.2□□□□□ -1.58
H3F3AP84243 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.2□□□□□ -1.58
H3F3AP84243 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
H3F3AP84243 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
H3F3AP84243 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
H3F3AP84243 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
H3F3AP84243 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
H3F3AP84243 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
H3F3AP84243 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.2□□□□□ -1.58
H3F3AP84243 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.2□□□□□ -1.58
H3F3AP84243 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.2□□□□□ -1.58
H3F3AP84243 AL355834.1-201ENST00000556602 3965 ntBASIC5.2□□□□□ -1.58
H3F3AP84243 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
H3F3AP84243 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
H3F3AP84243 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.2□□□□□ -1.58
H3F3AP84243 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
H3F3AP84243 CASC19-260ENST00000641828 2001 ntBASIC5.19□□□□□ -1.58
H3F3AP84243 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
H3F3AP84243 MFSD8-219ENST00000641228 2559 ntBASIC5.19□□□□□ -1.58
H3F3AP84243 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.19□□□□□ -1.58
H3F3AP84243 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.19□□□□□ -1.58
H3F3AP84243 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
H3F3AP84243 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
H3F3AP84243 GTF2IP4-201ENST00000453092 2054 ntBASIC5.19□□□□□ -1.58
H3F3AP84243 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
H3F3AP84243 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
H3F3AP84243 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
H3F3AP84243 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.19□□□□□ -1.58
H3F3AP84243 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
H3F3AP84243 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.19□□□□□ -1.58
H3F3AP84243 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.19□□□□□ -1.58
H3F3AP84243 HMGN1P20-201ENST00000411849 300 ntBASIC5.19□□□□□ -1.58
H3F3AP84243 SLC20A1P1-201ENST00000413906 956 ntBASIC5.19□□□□□ -1.58
H3F3AP84243 AK4P4-201ENST00000419465 646 ntBASIC5.19□□□□□ -1.58
H3F3AP84243 CRIP1P1-201ENST00000427567 185 ntBASIC5.19□□□□□ -1.58
H3F3AP84243 BX323845.3-201ENST00000428215 527 ntBASIC5.19□□□□□ -1.58
H3F3AP84243 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.19□□□□□ -1.58
H3F3AP84243 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.19□□□□□ -1.58
H3F3AP84243 KRT8P51-201ENST00000438938 274 ntBASIC5.19□□□□□ -1.58
H3F3AP84243 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.19□□□□□ -1.58
H3F3AP84243 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.19□□□□□ -1.58
H3F3AP84243 HLA-DPA3-207ENST00000454398 229 ntBASIC5.19□□□□□ -1.58
H3F3AP84243 ACA64.1-201ENST00000459171 127 ntBASIC5.19□□□□□ -1.58
H3F3AP84243 AC011476.1-201ENST00000466725 307 ntBASIC5.19□□□□□ -1.58
H3F3AP84243 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.19□□□□□ -1.58
H3F3AP84243 PDCL3P4-201ENST00000489621 720 ntBASIC5.19□□□□□ -1.58
H3F3AP84243 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.19□□□□□ -1.58
H3F3AP84243 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.19□□□□□ -1.58
H3F3AP84243 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.19□□□□□ -1.58
H3F3AP84243 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.19□□□□□ -1.58
H3F3AP84243 AC114781.3-201ENST00000512083 142 ntBASIC5.19□□□□□ -1.58
H3F3AP84243 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.19□□□□□ -1.58
H3F3AP84243 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.19□□□□□ -1.58
H3F3AP84243 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
H3F3AP84243 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.19□□□□□ -1.58
H3F3AP84243 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.19□□□□□ -1.58
H3F3AP84243 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.19□□□□□ -1.58
H3F3AP84243 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
H3F3AP84243 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.19□□□□□ -1.58
H3F3AP84243 NANOGP3-201ENST00000605855 286 ntBASIC5.19□□□□□ -1.58
H3F3AP84243 AL096712.1-201ENST00000614561 159 ntBASIC5.19□□□□□ -1.58
H3F3AP84243 AL359742.1-201ENST00000622497 540 ntBASIC5.19□□□□□ -1.58
H3F3AP84243 OR8G3P-202ENST00000641572 1255 ntBASIC5.19□□□□□ -1.58
H3F3AP84243 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
H3F3AP84243 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
H3F3AP84243 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
H3F3AP84243 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
H3F3AP84243 BCORP1-203ENST00000513194 5093 ntBASIC5.19□□□□□ -1.58
H3F3AP84243 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.19□□□□□ -1.58
H3F3AP84243 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.19□□□□□ -1.58
H3F3AP84243 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
H3F3AP84243 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.19□□□□□ -1.58
H3F3AP84243 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.19□□□□□ -1.58
H3F3AP84243 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.19□□□□□ -1.58
H3F3AP84243 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
H3F3AP84243 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.18□□□□□ -1.58
H3F3AP84243 AL355488.2-201ENST00000609909 2850 ntBASIC5.18□□□□□ -1.58
H3F3AP84243 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
H3F3AP84243 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
H3F3AP84243 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.18□□□□□ -1.58
H3F3AP84243 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
H3F3AP84243 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
H3F3AP84243 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.18□□□□□ -1.58
H3F3AP84243 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
H3F3AP84243 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.18□□□□□ -1.58
H3F3AP84243 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.18□□□□□ -1.58
H3F3AP84243 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.18□□□□□ -1.58
H3F3AP84243 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
H3F3AP84243 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
H3F3AP84243 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
H3F3AP84243 OOSP1-201ENST00000398992 1270 ntBASIC5.18□□□□□ -1.58
H3F3AP84243 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.18□□□□□ -1.58
H3F3AP84243 RPS3AP2-201ENST00000407190 754 ntBASIC5.18□□□□□ -1.58
H3F3AP84243 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.18□□□□□ -1.58
H3F3AP84243 AC126120.1-201ENST00000431082 470 ntBASIC5.18□□□□□ -1.58
H3F3AP84243 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.18□□□□□ -1.58
H3F3AP84243 SUMO2P8-201ENST00000434672 286 ntBASIC5.18□□□□□ -1.58
H3F3AP84243 GAPDHP48-201ENST00000436626 961 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms