Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AC079148.1-201ENST00000565944 819 ntBASIC4.96□□□□□ -1.62
CX3CL1P78423 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC4.96□□□□□ -1.62
CX3CL1P78423 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC4.96□□□□□ -1.62
CX3CL1P78423 MIR3189-201ENST00000578735 73 ntBASIC4.96□□□□□ -1.62
CX3CL1P78423 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC4.96□□□□□ -1.62
CX3CL1P78423 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
CX3CL1P78423 AC005776.1-201ENST00000603164 290 ntBASIC4.96□□□□□ -1.62
CX3CL1P78423 AC135178.6-201ENST00000605314 398 ntBASIC4.96□□□□□ -1.62
CX3CL1P78423 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC4.96□□□□□ -1.62
CX3CL1P78423 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC4.96□□□□□ -1.62
CX3CL1P78423 AL391262.2-201ENST00000622466 494 ntBASIC4.96□□□□□ -1.62
CX3CL1P78423 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
CX3CL1P78423 AC018628.1-201ENST00000624147 3819 ntBASIC4.96□□□□□ -1.62
CX3CL1P78423 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC4.96□□□□□ -1.62
CX3CL1P78423 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC4.96□□□□□ -1.62
CX3CL1P78423 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC4.96□□□□□ -1.62
CX3CL1P78423 AC116667.2-201ENST00000641075 823 ntBASIC4.96□□□□□ -1.62
CX3CL1P78423 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CX3CL1P78423 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CX3CL1P78423 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CX3CL1P78423 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CX3CL1P78423 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
CX3CL1P78423 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC4.96□□□□□ -1.62
CX3CL1P78423 AC020656.2-201ENST00000613291 5309 ntBASIC4.96□□□□□ -1.62
CX3CL1P78423 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC4.96□□□□□ -1.62
CX3CL1P78423 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CX3CL1P78423 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CX3CL1P78423 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
CX3CL1P78423 AP001541.1-201ENST00000623322 1904 ntBASIC4.95□□□□□ -1.62
CX3CL1P78423 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CX3CL1P78423 AC087516.1-201ENST00000561236 2428 ntBASIC4.95□□□□□ -1.62
CX3CL1P78423 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
CX3CL1P78423 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC4.95□□□□□ -1.62
CX3CL1P78423 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CX3CL1P78423 AC004656.1-201ENST00000568479 4951 ntBASIC4.95□□□□□ -1.62
CX3CL1P78423 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CX3CL1P78423 RNA5SP346-201ENST00000363541 121 ntBASIC4.95□□□□□ -1.62
CX3CL1P78423 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CX3CL1P78423 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CX3CL1P78423 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC4.95□□□□□ -1.62
CX3CL1P78423 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC4.95□□□□□ -1.62
CX3CL1P78423 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC4.95□□□□□ -1.62
CX3CL1P78423 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC4.95□□□□□ -1.62
CX3CL1P78423 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC4.95□□□□□ -1.62
CX3CL1P78423 PRUNEP1-201ENST00000425846 705 ntBASIC4.95□□□□□ -1.62
CX3CL1P78423 MORF4L1P7-201ENST00000426038 703 ntBASIC4.95□□□□□ -1.62
CX3CL1P78423 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC4.95□□□□□ -1.62
CX3CL1P78423 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC4.95□□□□□ -1.62
CX3CL1P78423 PPIAP10-201ENST00000438675 458 ntBASIC4.95□□□□□ -1.62
CX3CL1P78423 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CX3CL1P78423 AC016908.1-201ENST00000442571 1219 ntBASIC4.95□□□□□ -1.62
CX3CL1P78423 AC079922.1-201ENST00000443291 359 ntBASIC4.95□□□□□ -1.62
CX3CL1P78423 SUMO2P1-206ENST00000445436 284 ntBASIC4.95□□□□□ -1.62
CX3CL1P78423 AC097359.1-201ENST00000447946 463 ntBASIC4.95□□□□□ -1.62
CX3CL1P78423 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC4.95□□□□□ -1.62
CX3CL1P78423 AL133351.3-201ENST00000454998 193 ntBASIC4.95□□□□□ -1.62
CX3CL1P78423 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC4.95□□□□□ -1.62
CX3CL1P78423 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC4.95□□□□□ -1.62
CX3CL1P78423 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC4.95□□□□□ -1.62
CX3CL1P78423 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC4.95□□□□□ -1.62
CX3CL1P78423 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CX3CL1P78423 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CX3CL1P78423 AOX3P-204ENST00000491025 2107 ntBASIC4.95□□□□□ -1.62
CX3CL1P78423 RPS27P20-201ENST00000492051 246 ntBASIC4.95□□□□□ -1.62
CX3CL1P78423 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC4.95□□□□□ -1.62
CX3CL1P78423 AC010468.3-201ENST00000508225 458 ntBASIC4.95□□□□□ -1.62
CX3CL1P78423 GUSBP9-201ENST00000510138 584 ntBASIC4.95□□□□□ -1.62
CX3CL1P78423 AC034244.2-201ENST00000514668 858 ntBASIC4.95□□□□□ -1.62
CX3CL1P78423 AC103833.1-201ENST00000517442 172 ntBASIC4.95□□□□□ -1.62
CX3CL1P78423 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CX3CL1P78423 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC4.95□□□□□ -1.62
CX3CL1P78423 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC4.95□□□□□ -1.62
CX3CL1P78423 RPA2P3-201ENST00000533268 770 ntBASIC4.95□□□□□ -1.62
CX3CL1P78423 OR4A40P-201ENST00000533878 948 ntBASIC4.95□□□□□ -1.62
CX3CL1P78423 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC4.95□□□□□ -1.62
CX3CL1P78423 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC4.95□□□□□ -1.62
CX3CL1P78423 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC4.95□□□□□ -1.62
CX3CL1P78423 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC4.95□□□□□ -1.62
CX3CL1P78423 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC4.95□□□□□ -1.62
CX3CL1P78423 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.95□□□□□ -1.62
CX3CL1P78423 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC4.95□□□□□ -1.62
CX3CL1P78423 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC4.95□□□□□ -1.62
CX3CL1P78423 OR4H6P-201ENST00000563771 921 ntBASIC4.95□□□□□ -1.62
CX3CL1P78423 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC4.95□□□□□ -1.62
CX3CL1P78423 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC4.95□□□□□ -1.62
CX3CL1P78423 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CX3CL1P78423 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC4.95□□□□□ -1.62
CX3CL1P78423 AC027229.1-201ENST00000583887 253 ntBASIC4.95□□□□□ -1.62
CX3CL1P78423 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
CX3CL1P78423 AC005242.1-201ENST00000585658 438 ntBASIC4.95□□□□□ -1.62
CX3CL1P78423 NPIPB1P-202ENST00000588786 828 ntBASIC4.95□□□□□ -1.62
CX3CL1P78423 DYNLL1P1-201ENST00000595442 269 ntBASIC4.95□□□□□ -1.62
CX3CL1P78423 MTCO3P22-201ENST00000603219 784 ntBASIC4.95□□□□□ -1.62
CX3CL1P78423 AL583832.1-201ENST00000603227 784 ntBASIC4.95□□□□□ -1.62
CX3CL1P78423 BNIP3P19-201ENST00000605397 577 ntBASIC4.95□□□□□ -1.62
CX3CL1P78423 AL021368.3-201ENST00000607119 578 ntBASIC4.95□□□□□ -1.62
CX3CL1P78423 AC105105.5-201ENST00000622635 1294 ntBASIC4.95□□□□□ -1.62
CX3CL1P78423 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
CX3CL1P78423 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CX3CL1P78423 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms