Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.79□□□□□ -1.48
RAE1P78406 AC093524.1-201ENST00000564266 1094 ntBASIC5.79□□□□□ -1.48
RAE1P78406 AC106730.2-201ENST00000566641 540 ntBASIC5.79□□□□□ -1.48
RAE1P78406 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.79□□□□□ -1.48
RAE1P78406 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC5.79□□□□□ -1.48
RAE1P78406 AC119403.2-201ENST00000590960 598 ntBASIC5.79□□□□□ -1.48
RAE1P78406 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.79□□□□□ -1.48
RAE1P78406 AC068313.1-201ENST00000604028 1008 ntBASIC5.79□□□□□ -1.48
RAE1P78406 AC013244.3-201ENST00000605614 388 ntBASIC5.79□□□□□ -1.48
RAE1P78406 AC015922.4-201ENST00000612568 690 ntBASIC5.79□□□□□ -1.48
RAE1P78406 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RAE1P78406 AC007275.1-201ENST00000621243 671 ntBASIC5.79□□□□□ -1.48
RAE1P78406 AC019080.5-201ENST00000624891 757 ntBASIC5.79□□□□□ -1.48
RAE1P78406 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC5.79□□□□□ -1.48
RAE1P78406 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RAE1P78406 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RAE1P78406 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
RAE1P78406 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RAE1P78406 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC5.79□□□□□ -1.48
RAE1P78406 AC106754.1-201ENST00000562632 1513 ntBASIC5.79□□□□□ -1.48
RAE1P78406 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RAE1P78406 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.79□□□□□ -1.48
RAE1P78406 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RAE1P78406 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RAE1P78406 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.78□□□□□ -1.48
RAE1P78406 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
RAE1P78406 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RAE1P78406 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RAE1P78406 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RAE1P78406 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RAE1P78406 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
RAE1P78406 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RAE1P78406 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RAE1P78406 RNU6-1251P-201ENST00000364502 107 ntBASIC5.78□□□□□ -1.48
RAE1P78406 MIR188-201ENST00000385034 86 ntBASIC5.78□□□□□ -1.48
RAE1P78406 RN7SKP199-201ENST00000410325 305 ntBASIC5.78□□□□□ -1.48
RAE1P78406 AL035422.1-201ENST00000414193 397 ntBASIC5.78□□□□□ -1.48
RAE1P78406 FAM183DP-201ENST00000421987 399 ntBASIC5.78□□□□□ -1.48
RAE1P78406 AC092651.1-201ENST00000426110 312 ntBASIC5.78□□□□□ -1.48
RAE1P78406 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.78□□□□□ -1.48
RAE1P78406 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RAE1P78406 PSMD10P2-201ENST00000432890 672 ntBASIC5.78□□□□□ -1.48
RAE1P78406 AC004854.1-201ENST00000440356 349 ntBASIC5.78□□□□□ -1.48
RAE1P78406 AL356121.1-201ENST00000442911 156 ntBASIC5.78□□□□□ -1.48
RAE1P78406 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC5.78□□□□□ -1.48
RAE1P78406 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC5.78□□□□□ -1.48
RAE1P78406 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC5.78□□□□□ -1.48
RAE1P78406 ZNF619P1-201ENST00000446539 752 ntBASIC5.78□□□□□ -1.48
RAE1P78406 AL157884.3-201ENST00000448273 1184 ntBASIC5.78□□□□□ -1.48
RAE1P78406 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RAE1P78406 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
RAE1P78406 CEACAMP11-201ENST00000455211 583 ntBASIC5.78□□□□□ -1.48
RAE1P78406 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC5.78□□□□□ -1.48
RAE1P78406 RPL12P24-201ENST00000474907 486 ntBASIC5.78□□□□□ -1.48
RAE1P78406 AC124945.1-201ENST00000485133 188 ntBASIC5.78□□□□□ -1.48
RAE1P78406 RPL23AP40-201ENST00000487630 390 ntBASIC5.78□□□□□ -1.48
RAE1P78406 AC106822.1-201ENST00000502647 526 ntBASIC5.78□□□□□ -1.48
RAE1P78406 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.78□□□□□ -1.48
RAE1P78406 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RAE1P78406 RNU5A-7P-201ENST00000515979 116 ntBASIC5.78□□□□□ -1.48
RAE1P78406 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.78□□□□□ -1.48
RAE1P78406 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC5.78□□□□□ -1.48
RAE1P78406 OR4A17P-201ENST00000526032 904 ntBASIC5.78□□□□□ -1.48
RAE1P78406 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RAE1P78406 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.78□□□□□ -1.48
RAE1P78406 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC5.78□□□□□ -1.48
RAE1P78406 AL049779.3-201ENST00000557141 606 ntBASIC5.78□□□□□ -1.48
RAE1P78406 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.78□□□□□ -1.48
RAE1P78406 MT1CP-201ENST00000567054 174 ntBASIC5.78□□□□□ -1.48
RAE1P78406 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC5.78□□□□□ -1.48
RAE1P78406 MIR5010-201ENST00000582846 120 ntBASIC5.78□□□□□ -1.48
RAE1P78406 MIR4701-201ENST00000583094 63 ntBASIC5.78□□□□□ -1.48
RAE1P78406 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.78□□□□□ -1.48
RAE1P78406 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.78□□□□□ -1.48
RAE1P78406 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.78□□□□□ -1.48
RAE1P78406 MTCO3P22-201ENST00000603219 784 ntBASIC5.78□□□□□ -1.48
RAE1P78406 AC023762.1-201ENST00000603280 584 ntBASIC5.78□□□□□ -1.48
RAE1P78406 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC5.78□□□□□ -1.48
RAE1P78406 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC5.78□□□□□ -1.48
RAE1P78406 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC5.78□□□□□ -1.48
RAE1P78406 AC063952.1-203ENST00000634410 658 ntBASIC5.78□□□□□ -1.48
RAE1P78406 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.78□□□□□ -1.48
RAE1P78406 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
RAE1P78406 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RAE1P78406 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.78□□□□□ -1.48
RAE1P78406 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RAE1P78406 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
RAE1P78406 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
RAE1P78406 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
RAE1P78406 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.77□□□□□ -1.49
RAE1P78406 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
RAE1P78406 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.77□□□□□ -1.49
RAE1P78406 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RAE1P78406 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RAE1P78406 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
RAE1P78406 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RAE1P78406 AL132656.3-201ENST00000606384 1595 ntBASIC5.77□□□□□ -1.49
RAE1P78406 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
RAE1P78406 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RAE1P78406 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms