Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC4.13□□□□□ -1.75
CKS1BP61024 AC005618.4-201ENST00000625053 554 ntBASIC4.13□□□□□ -1.75
CKS1BP61024 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC4.13□□□□□ -1.75
CKS1BP61024 AL596275.2-207ENST00000641188 675 ntBASIC4.13□□□□□ -1.75
CKS1BP61024 AL596275.2-204ENST00000641628 552 ntBASIC4.13□□□□□ -1.75
CKS1BP61024 AL596275.2-206ENST00000641957 626 ntBASIC4.13□□□□□ -1.75
CKS1BP61024 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CKS1BP61024 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CKS1BP61024 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CKS1BP61024 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC4.13□□□□□ -1.75
CKS1BP61024 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.13□□□□□ -1.75
CKS1BP61024 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
CKS1BP61024 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC4.13□□□□□ -1.75
CKS1BP61024 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CKS1BP61024 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CKS1BP61024 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
CKS1BP61024 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.12□□□□□ -1.75
CKS1BP61024 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CKS1BP61024 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CKS1BP61024 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC4.12□□□□□ -1.75
CKS1BP61024 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC4.12□□□□□ -1.75
CKS1BP61024 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CKS1BP61024 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CKS1BP61024 AL034549.2-201ENST00000618285 3373 ntBASIC4.12□□□□□ -1.75
CKS1BP61024 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CKS1BP61024 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CKS1BP61024 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CKS1BP61024 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC4.12□□□□□ -1.75
CKS1BP61024 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CKS1BP61024 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC4.12□□□□□ -1.75
CKS1BP61024 RN7SKP221-201ENST00000410420 301 ntBASIC4.12□□□□□ -1.75
CKS1BP61024 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC4.12□□□□□ -1.75
CKS1BP61024 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC4.12□□□□□ -1.75
CKS1BP61024 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC4.12□□□□□ -1.75
CKS1BP61024 RPS7P8-201ENST00000418311 581 ntBASIC4.12□□□□□ -1.75
CKS1BP61024 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC4.12□□□□□ -1.75
CKS1BP61024 AC012519.1-201ENST00000424588 610 ntBASIC4.12□□□□□ -1.75
CKS1BP61024 USP24P1-201ENST00000433802 779 ntBASIC4.12□□□□□ -1.75
CKS1BP61024 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC4.12□□□□□ -1.75
CKS1BP61024 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC4.12□□□□□ -1.75
CKS1BP61024 AL592114.2-201ENST00000440142 532 ntBASIC4.12□□□□□ -1.75
CKS1BP61024 BMS1P11-201ENST00000442351 885 ntBASIC4.12□□□□□ -1.75
CKS1BP61024 AC073909.1-201ENST00000447112 999 ntBASIC4.12□□□□□ -1.75
CKS1BP61024 AL121578.2-201ENST00000448797 447 ntBASIC4.12□□□□□ -1.75
CKS1BP61024 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC4.12□□□□□ -1.75
CKS1BP61024 BMS1P9-201ENST00000457640 885 ntBASIC4.12□□□□□ -1.75
CKS1BP61024 AC022795.1-201ENST00000473808 480 ntBASIC4.12□□□□□ -1.75
CKS1BP61024 RN7SL70P-201ENST00000478322 302 ntBASIC4.12□□□□□ -1.75
CKS1BP61024 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
CKS1BP61024 AC093766.1-201ENST00000502606 866 ntTSL 3 BASIC4.12□□□□□ -1.75
CKS1BP61024 XAGE1B-205ENST00000518075 472 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
CKS1BP61024 AZIN1-AS1-211ENST00000520455 480 ntTSL 3 BASIC4.12□□□□□ -1.75
CKS1BP61024 IGHV4-55-201ENST00000520889 368 ntBASIC4.12□□□□□ -1.75
CKS1BP61024 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC4.12□□□□□ -1.75
CKS1BP61024 OR6M2P-201ENST00000529831 871 ntBASIC4.12□□□□□ -1.75
CKS1BP61024 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC4.12□□□□□ -1.75
CKS1BP61024 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC4.12□□□□□ -1.75
CKS1BP61024 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC4.12□□□□□ -1.75
CKS1BP61024 AC106730.2-201ENST00000566641 540 ntBASIC4.12□□□□□ -1.75
CKS1BP61024 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.12□□□□□ -1.75
CKS1BP61024 AC027229.1-201ENST00000583887 253 ntBASIC4.12□□□□□ -1.75
CKS1BP61024 AC020916.2-201ENST00000591242 360 ntBASIC4.12□□□□□ -1.75
CKS1BP61024 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC4.12□□□□□ -1.75
CKS1BP61024 AC005332.4-201ENST00000592752 579 ntBASIC4.12□□□□□ -1.75
CKS1BP61024 RPL7AP69-201ENST00000595306 806 ntBASIC4.12□□□□□ -1.75
CKS1BP61024 AC087468.1-201ENST00000604365 630 ntBASIC4.12□□□□□ -1.75
CKS1BP61024 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC4.12□□□□□ -1.75
CKS1BP61024 AC004839.1-201ENST00000610269 501 ntBASIC4.12□□□□□ -1.75
CKS1BP61024 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC4.12□□□□□ -1.75
CKS1BP61024 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CKS1BP61024 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC4.12□□□□□ -1.75
CKS1BP61024 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC4.12□□□□□ -1.75
CKS1BP61024 MBD5-221ENST00000637159 902 ntTSL 5 BASIC4.12□□□□□ -1.75
CKS1BP61024 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CKS1BP61024 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
CKS1BP61024 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.12□□□□□ -1.75
CKS1BP61024 AC063976.2-201ENST00000425667 3556 ntBASIC4.12□□□□□ -1.75
CKS1BP61024 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CKS1BP61024 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
CKS1BP61024 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CKS1BP61024 AC000374.1-201ENST00000434698 1745 ntBASIC4.12□□□□□ -1.75
CKS1BP61024 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.12□□□□□ -1.75
CKS1BP61024 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.12□□□□□ -1.75
CKS1BP61024 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CKS1BP61024 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.12□□□□□ -1.75
CKS1BP61024 AC009220.2-201ENST00000489759 1751 ntBASIC4.12□□□□□ -1.75
CKS1BP61024 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CKS1BP61024 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.11□□□□□ -1.75
CKS1BP61024 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CKS1BP61024 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
CKS1BP61024 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
CKS1BP61024 AC079248.1-201ENST00000427568 1546 ntBASIC4.11□□□□□ -1.75
CKS1BP61024 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CKS1BP61024 AL731532.2-201ENST00000623542 1953 ntBASIC4.11□□□□□ -1.75
CKS1BP61024 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CKS1BP61024 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CKS1BP61024 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CKS1BP61024 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CKS1BP61024 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CKS1BP61024 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms