Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AC106872.5-201ENST00000508856 1416 ntBASIC5.58□□□□□ -1.52
VSX2P58304 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
VSX2P58304 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
VSX2P58304 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
VSX2P58304 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
VSX2P58304 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.58□□□□□ -1.52
VSX2P58304 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
VSX2P58304 RN7SKP186-201ENST00000365371 303 ntBASIC5.58□□□□□ -1.52
VSX2P58304 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.58□□□□□ -1.52
VSX2P58304 RNA5SP284-201ENST00000384547 118 ntBASIC5.58□□□□□ -1.52
VSX2P58304 EEF1B2P8-201ENST00000414101 671 ntBASIC5.58□□□□□ -1.52
VSX2P58304 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.58□□□□□ -1.52
VSX2P58304 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC5.58□□□□□ -1.52
VSX2P58304 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.58□□□□□ -1.52
VSX2P58304 AL365220.1-201ENST00000432923 399 ntBASIC5.58□□□□□ -1.52
VSX2P58304 RPL23AP19-201ENST00000436229 369 ntBASIC5.58□□□□□ -1.52
VSX2P58304 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.58□□□□□ -1.52
VSX2P58304 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.58□□□□□ -1.52
VSX2P58304 AL445665.1-202ENST00000452436 324 ntBASIC5.58□□□□□ -1.52
VSX2P58304 AL157777.1-201ENST00000468100 304 ntBASIC5.58□□□□□ -1.52
VSX2P58304 AC007998.1-201ENST00000474156 672 ntBASIC5.58□□□□□ -1.52
VSX2P58304 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.58□□□□□ -1.52
VSX2P58304 CR383656.1-201ENST00000484916 377 ntBASIC5.58□□□□□ -1.52
VSX2P58304 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
VSX2P58304 AC090058.1-201ENST00000498788 435 ntBASIC5.58□□□□□ -1.52
VSX2P58304 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.58□□□□□ -1.52
VSX2P58304 SNORA70.20-201ENST00000516848 126 ntBASIC5.58□□□□□ -1.52
VSX2P58304 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.58□□□□□ -1.52
VSX2P58304 HMGN2P36-201ENST00000529541 409 ntBASIC5.58□□□□□ -1.52
VSX2P58304 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
VSX2P58304 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.58□□□□□ -1.52
VSX2P58304 AL049779.3-201ENST00000557141 606 ntBASIC5.58□□□□□ -1.52
VSX2P58304 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.58□□□□□ -1.52
VSX2P58304 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
VSX2P58304 AC007346.2-201ENST00000564816 892 ntBASIC5.58□□□□□ -1.52
VSX2P58304 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.58□□□□□ -1.52
VSX2P58304 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.58□□□□□ -1.52
VSX2P58304 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.58□□□□□ -1.52
VSX2P58304 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.58□□□□□ -1.52
VSX2P58304 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.58□□□□□ -1.52
VSX2P58304 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.58□□□□□ -1.52
VSX2P58304 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.58□□□□□ -1.52
VSX2P58304 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.58□□□□□ -1.52
VSX2P58304 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
VSX2P58304 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.58□□□□□ -1.52
VSX2P58304 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
VSX2P58304 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.58□□□□□ -1.52
VSX2P58304 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
VSX2P58304 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
VSX2P58304 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
VSX2P58304 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
VSX2P58304 AL359955.1-201ENST00000455242 3275 ntBASIC5.57□□□□□ -1.52
VSX2P58304 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
VSX2P58304 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
VSX2P58304 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
VSX2P58304 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
VSX2P58304 GTF2IP4-201ENST00000453092 2054 ntBASIC5.57□□□□□ -1.52
VSX2P58304 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
VSX2P58304 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
VSX2P58304 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.57□□□□□ -1.52
VSX2P58304 AP004607.3-201ENST00000530354 3915 ntBASIC5.57□□□□□ -1.52
VSX2P58304 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
VSX2P58304 GNG5P2-201ENST00000372054 207 ntBASIC5.57□□□□□ -1.52
VSX2P58304 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
VSX2P58304 OR7E101P-201ENST00000400428 513 ntBASIC5.57□□□□□ -1.52
VSX2P58304 RPS3AP2-201ENST00000407190 754 ntBASIC5.57□□□□□ -1.52
VSX2P58304 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.57□□□□□ -1.52
VSX2P58304 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.57□□□□□ -1.52
VSX2P58304 AK4P4-201ENST00000419465 646 ntBASIC5.57□□□□□ -1.52
VSX2P58304 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
VSX2P58304 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.57□□□□□ -1.52
VSX2P58304 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC5.57□□□□□ -1.52
VSX2P58304 RNU1-88P-201ENST00000459274 128 ntBASIC5.57□□□□□ -1.52
VSX2P58304 SNRPCP3-201ENST00000474888 476 ntBASIC5.57□□□□□ -1.52
VSX2P58304 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC5.57□□□□□ -1.52
VSX2P58304 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.57□□□□□ -1.52
VSX2P58304 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.57□□□□□ -1.52
VSX2P58304 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
VSX2P58304 AC244502.2-201ENST00000543361 851 ntBASIC5.57□□□□□ -1.52
VSX2P58304 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC5.57□□□□□ -1.52
VSX2P58304 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.57□□□□□ -1.52
VSX2P58304 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.57□□□□□ -1.52
VSX2P58304 AC026124.2-201ENST00000621847 656 ntBASIC5.57□□□□□ -1.52
VSX2P58304 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.57□□□□□ -1.52
VSX2P58304 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.57□□□□□ -1.52
VSX2P58304 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
VSX2P58304 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
VSX2P58304 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
VSX2P58304 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.57□□□□□ -1.52
VSX2P58304 AC232271.1-201ENST00000602455 2715 ntBASIC5.57□□□□□ -1.52
VSX2P58304 AC239868.2-201ENST00000564237 4527 ntBASIC5.57□□□□□ -1.52
VSX2P58304 NLRP3P1-201ENST00000622303 1785 ntBASIC5.57□□□□□ -1.52
VSX2P58304 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
VSX2P58304 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
VSX2P58304 AL355834.1-201ENST00000556602 3965 ntBASIC5.57□□□□□ -1.52
VSX2P58304 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VSX2P58304 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.56□□□□□ -1.52
VSX2P58304 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
VSX2P58304 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VSX2P58304 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms