Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC5.53□□□□□ -1.52
CLDN20P56880 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.53□□□□□ -1.52
CLDN20P56880 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC5.53□□□□□ -1.52
CLDN20P56880 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
CLDN20P56880 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC5.53□□□□□ -1.52
CLDN20P56880 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.53□□□□□ -1.52
CLDN20P56880 SNORA26.10-201ENST00000516427 141 ntBASIC5.53□□□□□ -1.52
CLDN20P56880 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC5.53□□□□□ -1.52
CLDN20P56880 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CLDN20P56880 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.53□□□□□ -1.52
CLDN20P56880 MTND1P36-201ENST00000522384 936 ntBASIC5.53□□□□□ -1.52
CLDN20P56880 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC5.53□□□□□ -1.52
CLDN20P56880 TOMM20P1-201ENST00000534518 427 ntBASIC5.53□□□□□ -1.52
CLDN20P56880 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.53□□□□□ -1.52
CLDN20P56880 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.53□□□□□ -1.52
CLDN20P56880 AC092332.1-201ENST00000563684 829 ntBASIC5.53□□□□□ -1.52
CLDN20P56880 MTND4LP25-201ENST00000570218 163 ntBASIC5.53□□□□□ -1.52
CLDN20P56880 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC5.53□□□□□ -1.52
CLDN20P56880 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.53□□□□□ -1.52
CLDN20P56880 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.53□□□□□ -1.52
CLDN20P56880 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC5.53□□□□□ -1.52
CLDN20P56880 AC073111.2-201ENST00000605657 1075 ntBASIC5.53□□□□□ -1.52
CLDN20P56880 AC092266.1-201ENST00000610958 165 ntBASIC5.53□□□□□ -1.52
CLDN20P56880 RN7SL261P-201ENST00000613441 282 ntBASIC5.53□□□□□ -1.52
CLDN20P56880 AC025262.3-201ENST00000623666 360 ntBASIC5.53□□□□□ -1.52
CLDN20P56880 AC020978.9-201ENST00000624380 1141 ntBASIC5.53□□□□□ -1.52
CLDN20P56880 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC5.53□□□□□ -1.52
CLDN20P56880 AC093225.1-201ENST00000506867 1408 ntBASIC5.53□□□□□ -1.52
CLDN20P56880 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.53□□□□□ -1.52
CLDN20P56880 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.53□□□□□ -1.52
CLDN20P56880 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CLDN20P56880 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CLDN20P56880 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.53□□□□□ -1.52
CLDN20P56880 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.53□□□□□ -1.52
CLDN20P56880 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CLDN20P56880 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC5.53□□□□□ -1.52
CLDN20P56880 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CLDN20P56880 LYARP1-201ENST00000436977 1501 ntBASIC5.53□□□□□ -1.52
CLDN20P56880 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.53□□□□□ -1.52
CLDN20P56880 AC090220.1-201ENST00000593078 1699 ntBASIC5.53□□□□□ -1.52
CLDN20P56880 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.53□□□□□ -1.52
CLDN20P56880 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.53□□□□□ -1.52
CLDN20P56880 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CLDN20P56880 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.52□□□□□ -1.53
CLDN20P56880 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
CLDN20P56880 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CLDN20P56880 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
CLDN20P56880 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.52□□□□□ -1.53
CLDN20P56880 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CLDN20P56880 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC5.52□□□□□ -1.53
CLDN20P56880 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
CLDN20P56880 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
CLDN20P56880 AC119674.1-202ENST00000641333 1860 ntBASIC5.52□□□□□ -1.53
CLDN20P56880 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC5.52□□□□□ -1.53
CLDN20P56880 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CLDN20P56880 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CLDN20P56880 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
CLDN20P56880 OR56A4-201ENST00000330728 1209 ntBASIC5.52□□□□□ -1.53
CLDN20P56880 RNA5SP375-201ENST00000362975 119 ntBASIC5.52□□□□□ -1.53
CLDN20P56880 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC5.52□□□□□ -1.53
CLDN20P56880 RNU6-152P-201ENST00000384037 107 ntBASIC5.52□□□□□ -1.53
CLDN20P56880 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.52□□□□□ -1.53
CLDN20P56880 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC5.52□□□□□ -1.53
CLDN20P56880 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.52□□□□□ -1.53
CLDN20P56880 RPS7P8-201ENST00000418311 581 ntBASIC5.52□□□□□ -1.53
CLDN20P56880 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC5.52□□□□□ -1.53
CLDN20P56880 AC013470.3-201ENST00000420252 1194 ntBASIC5.52□□□□□ -1.53
CLDN20P56880 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC5.52□□□□□ -1.53
CLDN20P56880 BX276092.6-201ENST00000430476 250 ntBASIC5.52□□□□□ -1.53
CLDN20P56880 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.52□□□□□ -1.53
CLDN20P56880 AP000949.1-201ENST00000438328 629 ntBASIC5.52□□□□□ -1.53
CLDN20P56880 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.52□□□□□ -1.53
CLDN20P56880 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CLDN20P56880 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC5.52□□□□□ -1.53
CLDN20P56880 BX276092.8-201ENST00000455722 250 ntBASIC5.52□□□□□ -1.53
CLDN20P56880 AC090602.1-201ENST00000469695 252 ntBASIC5.52□□□□□ -1.53
CLDN20P56880 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC5.52□□□□□ -1.53
CLDN20P56880 AC098847.1-201ENST00000473094 348 ntBASIC5.52□□□□□ -1.53
CLDN20P56880 AC117394.1-201ENST00000477323 567 ntBASIC5.52□□□□□ -1.53
CLDN20P56880 PFN1P8-201ENST00000497012 543 ntBASIC5.52□□□□□ -1.53
CLDN20P56880 RBBP4P1-201ENST00000502424 1276 ntBASIC5.52□□□□□ -1.53
CLDN20P56880 AC008945.1-201ENST00000505144 499 ntBASIC5.52□□□□□ -1.53
CLDN20P56880 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.52□□□□□ -1.53
CLDN20P56880 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.52□□□□□ -1.53
CLDN20P56880 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.52□□□□□ -1.53
CLDN20P56880 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.52□□□□□ -1.53
CLDN20P56880 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.52□□□□□ -1.53
CLDN20P56880 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC5.52□□□□□ -1.53
CLDN20P56880 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.52□□□□□ -1.53
CLDN20P56880 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.52□□□□□ -1.53
CLDN20P56880 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.52□□□□□ -1.53
CLDN20P56880 CYCSP38-201ENST00000559840 322 ntBASIC5.52□□□□□ -1.53
CLDN20P56880 LINC00557-201ENST00000563184 1279 ntBASIC5.52□□□□□ -1.53
CLDN20P56880 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.52□□□□□ -1.53
CLDN20P56880 AC027281.1-201ENST00000574178 758 ntBASIC5.52□□□□□ -1.53
CLDN20P56880 AC020978.7-201ENST00000575953 1187 ntBASIC5.52□□□□□ -1.53
CLDN20P56880 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.52□□□□□ -1.53
CLDN20P56880 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.52□□□□□ -1.53
CLDN20P56880 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC5.52□□□□□ -1.53
CLDN20P56880 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms