Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC6.28□□□□□ -1.4
HDAC4P56524 SDC4P-201ENST00000453285 601 ntBASIC6.28□□□□□ -1.4
HDAC4P56524 AC124945.1-201ENST00000485133 188 ntBASIC6.28□□□□□ -1.4
HDAC4P56524 CCDC11P1-201ENST00000503137 1162 ntBASIC6.28□□□□□ -1.4
HDAC4P56524 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC6.28□□□□□ -1.4
HDAC4P56524 AC021146.10-201ENST00000515628 706 ntBASIC6.28□□□□□ -1.4
HDAC4P56524 Vault.2-201ENST00000516519 98 ntBASIC6.28□□□□□ -1.4
HDAC4P56524 AP002981.1-201ENST00000517692 975 ntBASIC6.28□□□□□ -1.4
HDAC4P56524 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
HDAC4P56524 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC6.28□□□□□ -1.4
HDAC4P56524 OR56A7P-201ENST00000524865 941 ntBASIC6.28□□□□□ -1.4
HDAC4P56524 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC6.28□□□□□ -1.4
HDAC4P56524 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
HDAC4P56524 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC6.28□□□□□ -1.4
HDAC4P56524 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC6.28□□□□□ -1.4
HDAC4P56524 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC6.28□□□□□ -1.4
HDAC4P56524 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC6.28□□□□□ -1.4
HDAC4P56524 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.28□□□□□ -1.4
HDAC4P56524 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC6.28□□□□□ -1.4
HDAC4P56524 AC010487.1-201ENST00000594408 1172 ntBASIC6.28□□□□□ -1.4
HDAC4P56524 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
HDAC4P56524 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC6.28□□□□□ -1.4
HDAC4P56524 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6.28□□□□□ -1.4
HDAC4P56524 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.28□□□□□ -1.4
HDAC4P56524 AC092681.3-201ENST00000609463 678 ntBASIC6.28□□□□□ -1.4
HDAC4P56524 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC6.28□□□□□ -1.4
HDAC4P56524 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.28□□□□□ -1.4
HDAC4P56524 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HDAC4P56524 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HDAC4P56524 USP40-202ENST00000409945 1946 ntTSL 2 BASIC6.28□□□□□ -1.4
HDAC4P56524 PSG10P-201ENST00000501199 1500 ntBASIC6.28□□□□□ -1.4
HDAC4P56524 MTCO1P28-201ENST00000574177 1528 ntBASIC6.28□□□□□ -1.4
HDAC4P56524 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
HDAC4P56524 AC022164.1-201ENST00000568767 2673 ntBASIC6.28□□□□□ -1.4
HDAC4P56524 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.28□□□□□ -1.4
HDAC4P56524 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
HDAC4P56524 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.27□□□□□ -1.4
HDAC4P56524 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.4
HDAC4P56524 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
HDAC4P56524 AC027279.4-201ENST00000624371 2072 ntBASIC6.27□□□□□ -1.41
HDAC4P56524 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.27□□□□□ -1.41
HDAC4P56524 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
HDAC4P56524 ING3-204ENST00000431467 1447 ntTSL 2 BASIC6.27□□□□□ -1.41
HDAC4P56524 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC6.27□□□□□ -1.41
HDAC4P56524 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HDAC4P56524 AL589826.1-201ENST00000340697 249 ntBASIC6.27□□□□□ -1.41
HDAC4P56524 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HDAC4P56524 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
HDAC4P56524 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.27□□□□□ -1.41
HDAC4P56524 RNU6-891P-201ENST00000384280 111 ntBASIC6.27□□□□□ -1.41
HDAC4P56524 AL136116.2-201ENST00000404020 785 ntBASIC6.27□□□□□ -1.41
HDAC4P56524 AL096711.1-201ENST00000404780 554 ntBASIC6.27□□□□□ -1.41
HDAC4P56524 RNA5SP431-201ENST00000410312 120 ntBASIC6.27□□□□□ -1.41
HDAC4P56524 CBX1P3-201ENST00000413296 527 ntBASIC6.27□□□□□ -1.41
HDAC4P56524 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC6.27□□□□□ -1.41
HDAC4P56524 TAAR4P-201ENST00000454843 1039 ntBASIC6.27□□□□□ -1.41
HDAC4P56524 OR2AF1P-201ENST00000454899 889 ntBASIC6.27□□□□□ -1.41
HDAC4P56524 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC6.27□□□□□ -1.41
HDAC4P56524 AP003168.1-201ENST00000530091 307 ntBASIC6.27□□□□□ -1.41
HDAC4P56524 AC084121.1-201ENST00000533882 835 ntBASIC6.27□□□□□ -1.41
HDAC4P56524 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
HDAC4P56524 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC6.27□□□□□ -1.41
HDAC4P56524 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC6.27□□□□□ -1.41
HDAC4P56524 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC6.27□□□□□ -1.41
HDAC4P56524 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC6.27□□□□□ -1.41
HDAC4P56524 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC6.27□□□□□ -1.41
HDAC4P56524 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC6.27□□□□□ -1.41
HDAC4P56524 uc_338.26-201ENST00000612659 160 ntBASIC6.27□□□□□ -1.41
HDAC4P56524 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC6.27□□□□□ -1.41
HDAC4P56524 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC6.27□□□□□ -1.41
HDAC4P56524 HSPD1P9-201ENST00000420325 1636 ntBASIC6.27□□□□□ -1.41
HDAC4P56524 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
HDAC4P56524 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.27□□□□□ -1.41
HDAC4P56524 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.27□□□□□ -1.41
HDAC4P56524 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
HDAC4P56524 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.27□□□□□ -1.41
HDAC4P56524 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HDAC4P56524 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
HDAC4P56524 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.27□□□□□ -1.41
HDAC4P56524 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
HDAC4P56524 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
HDAC4P56524 AC022417.1-201ENST00000624768 1303 ntBASIC6.26□□□□□ -1.41
HDAC4P56524 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC6.26□□□□□ -1.41
HDAC4P56524 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
HDAC4P56524 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HDAC4P56524 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
HDAC4P56524 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
HDAC4P56524 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC6.26□□□□□ -1.41
HDAC4P56524 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.26□□□□□ -1.41
HDAC4P56524 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
HDAC4P56524 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
HDAC4P56524 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HDAC4P56524 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
HDAC4P56524 RNU1-65P-201ENST00000363919 148 ntBASIC6.26□□□□□ -1.41
HDAC4P56524 PKIB-203ENST00000368446 556 ntTSL 2 BASIC6.26□□□□□ -1.41
HDAC4P56524 RPL23AP17-201ENST00000401064 499 ntBASIC6.26□□□□□ -1.41
HDAC4P56524 RPL35AP3-201ENST00000414680 288 ntBASIC6.26□□□□□ -1.41
HDAC4P56524 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC6.26□□□□□ -1.41
HDAC4P56524 NMD3P2-201ENST00000421815 761 ntBASIC6.26□□□□□ -1.41
HDAC4P56524 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms