Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 RNU6-538P-201ENST00000622329 107 ntBASIC5.87□□□□□ -1.47
SUMO3P55854 LINC02495-203ENST00000636704 242 ntBASIC5.87□□□□□ -1.47
SUMO3P55854 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC5.87□□□□□ -1.47
SUMO3P55854 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
SUMO3P55854 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SUMO3P55854 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
SUMO3P55854 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC5.87□□□□□ -1.47
SUMO3P55854 MR1-209ENST00000617803 7584 ntTSL 5 BASIC5.87□□□□□ -1.47
SUMO3P55854 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC5.87□□□□□ -1.47
SUMO3P55854 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.87□□□□□ -1.47
SUMO3P55854 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.87□□□□□ -1.47
SUMO3P55854 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
SUMO3P55854 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SUMO3P55854 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SUMO3P55854 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SUMO3P55854 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SUMO3P55854 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
SUMO3P55854 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
SUMO3P55854 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC5.86□□□□□ -1.47
SUMO3P55854 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SUMO3P55854 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC5.86□□□□□ -1.47
SUMO3P55854 AC005618.1-201ENST00000606901 3148 ntBASIC5.86□□□□□ -1.47
SUMO3P55854 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC5.86□□□□□ -1.47
SUMO3P55854 AL022323.4-201ENST00000623980 13120 ntBASIC5.86□□□□□ -1.47
SUMO3P55854 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SUMO3P55854 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC5.86□□□□□ -1.47
SUMO3P55854 AL391262.1-201ENST00000556558 1992 ntBASIC5.86□□□□□ -1.47
SUMO3P55854 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC5.86□□□□□ -1.47
SUMO3P55854 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SUMO3P55854 AC010329.1-201ENST00000593903 8328 ntBASIC5.86□□□□□ -1.47
SUMO3P55854 AC009779.8-201ENST00000641684 4384 ntBASIC5.86□□□□□ -1.47
SUMO3P55854 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC5.86□□□□□ -1.47
SUMO3P55854 AC119674.1-213ENST00000641177 1386 ntBASIC5.86□□□□□ -1.47
SUMO3P55854 ZNF29P-201ENST00000225587 168 ntBASIC5.86□□□□□ -1.47
SUMO3P55854 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
SUMO3P55854 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.86□□□□□ -1.47
SUMO3P55854 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SUMO3P55854 AC104297.1-201ENST00000393779 870 ntBASIC5.86□□□□□ -1.47
SUMO3P55854 RPL5P19-201ENST00000404228 893 ntBASIC5.86□□□□□ -1.47
SUMO3P55854 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC5.86□□□□□ -1.47
SUMO3P55854 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC5.86□□□□□ -1.47
SUMO3P55854 MTCO3P4-201ENST00000419236 787 ntBASIC5.86□□□□□ -1.47
SUMO3P55854 AC097721.1-201ENST00000427150 1253 ntBASIC5.86□□□□□ -1.47
SUMO3P55854 MTND2P5-201ENST00000432656 1006 ntBASIC5.86□□□□□ -1.47
SUMO3P55854 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.86□□□□□ -1.47
SUMO3P55854 PA2G4P1-201ENST00000442248 1197 ntBASIC5.86□□□□□ -1.47
SUMO3P55854 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC5.86□□□□□ -1.47
SUMO3P55854 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC5.86□□□□□ -1.47
SUMO3P55854 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC5.86□□□□□ -1.47
SUMO3P55854 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC5.86□□□□□ -1.47
SUMO3P55854 GTF2IP12-201ENST00000456547 356 ntBASIC5.86□□□□□ -1.47
SUMO3P55854 AC023245.1-201ENST00000468501 517 ntBASIC5.86□□□□□ -1.47
SUMO3P55854 H3F3AP5-201ENST00000475267 429 ntBASIC5.86□□□□□ -1.47
SUMO3P55854 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC5.86□□□□□ -1.47
SUMO3P55854 AC093720.1-201ENST00000505681 714 ntBASIC5.86□□□□□ -1.47
SUMO3P55854 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC5.86□□□□□ -1.47
SUMO3P55854 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC5.86□□□□□ -1.47
SUMO3P55854 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC5.86□□□□□ -1.47
SUMO3P55854 AC027369.2-201ENST00000528030 440 ntBASIC5.86□□□□□ -1.47
SUMO3P55854 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC5.86□□□□□ -1.47
SUMO3P55854 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC5.86□□□□□ -1.47
SUMO3P55854 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC5.86□□□□□ -1.47
SUMO3P55854 AC011611.5-201ENST00000552477 578 ntBASIC5.86□□□□□ -1.47
SUMO3P55854 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC5.86□□□□□ -1.47
SUMO3P55854 HMGN2P47-201ENST00000559378 272 ntBASIC5.86□□□□□ -1.47
SUMO3P55854 RBM22P12-201ENST00000567098 1255 ntBASIC5.86□□□□□ -1.47
SUMO3P55854 MIR4789-201ENST00000577469 82 ntBASIC5.86□□□□□ -1.47
SUMO3P55854 AC090616.1-201ENST00000583895 447 ntBASIC5.86□□□□□ -1.47
SUMO3P55854 AC026898.1-201ENST00000586404 571 ntBASIC5.86□□□□□ -1.47
SUMO3P55854 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.86□□□□□ -1.47
SUMO3P55854 VN1R87P-201ENST00000596706 487 ntBASIC5.86□□□□□ -1.47
SUMO3P55854 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC5.86□□□□□ -1.47
SUMO3P55854 AP002906.1-201ENST00000603405 233 ntBASIC5.86□□□□□ -1.47
SUMO3P55854 AL160237.3-201ENST00000604114 1013 ntBASIC5.86□□□□□ -1.47
SUMO3P55854 Z82195.1-201ENST00000604558 398 ntBASIC5.86□□□□□ -1.47
SUMO3P55854 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC5.86□□□□□ -1.47
SUMO3P55854 AL157392.4-201ENST00000609756 345 ntBASIC5.86□□□□□ -1.47
SUMO3P55854 AC006946.3-201ENST00000609791 756 ntBASIC5.86□□□□□ -1.47
SUMO3P55854 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.86□□□□□ -1.47
SUMO3P55854 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC5.86□□□□□ -1.47
SUMO3P55854 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
SUMO3P55854 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC5.86□□□□□ -1.47
SUMO3P55854 AL356863.1-201ENST00000623378 1080 ntBASIC5.86□□□□□ -1.47
SUMO3P55854 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SUMO3P55854 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SUMO3P55854 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SUMO3P55854 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SUMO3P55854 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SUMO3P55854 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SUMO3P55854 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SUMO3P55854 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.86□□□□□ -1.47
SUMO3P55854 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC5.86□□□□□ -1.47
SUMO3P55854 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
SUMO3P55854 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.86□□□□□ -1.47
SUMO3P55854 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
SUMO3P55854 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC5.86□□□□□ -1.47
SUMO3P55854 MAPK10-261ENST00000641050 3109 ntBASIC5.85□□□□□ -1.47
SUMO3P55854 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SUMO3P55854 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SUMO3P55854 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 128.5 ms