Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
PKNOX1P55347 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PKNOX1P55347 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.61□□□□□ -1.51
PKNOX1P55347 SNORA70.6-201ENST00000383934 134 ntBASIC5.61□□□□□ -1.51
PKNOX1P55347 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PKNOX1P55347 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
PKNOX1P55347 VTI1BP4-201ENST00000427516 527 ntBASIC5.61□□□□□ -1.51
PKNOX1P55347 RPL6P30-201ENST00000443382 862 ntBASIC5.61□□□□□ -1.51
PKNOX1P55347 RBMY2AP-201ENST00000445405 1157 ntBASIC5.61□□□□□ -1.51
PKNOX1P55347 RBMY2CP-201ENST00000448575 1157 ntBASIC5.61□□□□□ -1.51
PKNOX1P55347 RBMY2DP-202ENST00000448881 1157 ntBASIC5.61□□□□□ -1.51
PKNOX1P55347 CFL1P4-201ENST00000451536 498 ntBASIC5.61□□□□□ -1.51
PKNOX1P55347 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.61□□□□□ -1.51
PKNOX1P55347 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC5.61□□□□□ -1.51
PKNOX1P55347 SNORD125-201ENST00000459538 96 ntBASIC5.61□□□□□ -1.51
PKNOX1P55347 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.61□□□□□ -1.51
PKNOX1P55347 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.61□□□□□ -1.51
PKNOX1P55347 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.61□□□□□ -1.51
PKNOX1P55347 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.61□□□□□ -1.51
PKNOX1P55347 AC091874.2-201ENST00000505889 720 ntBASIC5.61□□□□□ -1.51
PKNOX1P55347 AL158068.1-201ENST00000506116 616 ntBASIC5.61□□□□□ -1.51
PKNOX1P55347 AC021146.10-201ENST00000515628 706 ntBASIC5.61□□□□□ -1.51
PKNOX1P55347 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC5.61□□□□□ -1.51
PKNOX1P55347 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.61□□□□□ -1.51
PKNOX1P55347 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.61□□□□□ -1.51
PKNOX1P55347 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC5.61□□□□□ -1.51
PKNOX1P55347 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.61□□□□□ -1.51
PKNOX1P55347 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC5.61□□□□□ -1.51
PKNOX1P55347 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.61□□□□□ -1.51
PKNOX1P55347 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.61□□□□□ -1.51
PKNOX1P55347 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC5.61□□□□□ -1.51
PKNOX1P55347 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
PKNOX1P55347 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PKNOX1P55347 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.61□□□□□ -1.51
PKNOX1P55347 AC005479.3-201ENST00000602790 431 ntBASIC5.61□□□□□ -1.51
PKNOX1P55347 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC5.61□□□□□ -1.51
PKNOX1P55347 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PKNOX1P55347 AL132656.3-201ENST00000606384 1595 ntBASIC5.61□□□□□ -1.51
PKNOX1P55347 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
PKNOX1P55347 MIR6809-201ENST00000612189 116 ntBASIC5.61□□□□□ -1.51
PKNOX1P55347 AC007786.3-201ENST00000615154 596 ntBASIC5.61□□□□□ -1.51
PKNOX1P55347 AC245014.3-201ENST00000618589 347 ntBASIC5.61□□□□□ -1.51
PKNOX1P55347 AL353684.1-201ENST00000622677 1120 ntBASIC5.61□□□□□ -1.51
PKNOX1P55347 MFSD8-219ENST00000641228 2559 ntBASIC5.61□□□□□ -1.51
PKNOX1P55347 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PKNOX1P55347 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
PKNOX1P55347 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
PKNOX1P55347 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PKNOX1P55347 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PKNOX1P55347 MAPK10-328ENST00000641553 4009 ntBASIC5.6□□□□□ -1.51
PKNOX1P55347 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.6□□□□□ -1.51
PKNOX1P55347 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC5.6□□□□□ -1.51
PKNOX1P55347 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
PKNOX1P55347 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.6□□□□□ -1.51
PKNOX1P55347 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.6□□□□□ -1.51
PKNOX1P55347 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PKNOX1P55347 AC093225.1-201ENST00000506867 1408 ntBASIC5.6□□□□□ -1.51
PKNOX1P55347 AL354854.1-201ENST00000455940 1363 ntBASIC5.6□□□□□ -1.51
PKNOX1P55347 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.6□□□□□ -1.51
PKNOX1P55347 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.6□□□□□ -1.51
PKNOX1P55347 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PKNOX1P55347 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC5.6□□□□□ -1.51
PKNOX1P55347 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PKNOX1P55347 GCNT1P4-201ENST00000404096 329 ntBASIC5.6□□□□□ -1.51
PKNOX1P55347 AL359885.1-201ENST00000415786 903 ntBASIC5.6□□□□□ -1.51
PKNOX1P55347 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.6□□□□□ -1.51
PKNOX1P55347 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.6□□□□□ -1.51
PKNOX1P55347 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.6□□□□□ -1.51
PKNOX1P55347 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.6□□□□□ -1.51
PKNOX1P55347 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC5.6□□□□□ -1.51
PKNOX1P55347 AC098818.1-201ENST00000478593 252 ntBASIC5.6□□□□□ -1.51
PKNOX1P55347 RPS7P6-201ENST00000485777 579 ntBASIC5.6□□□□□ -1.51
PKNOX1P55347 AC105420.1-201ENST00000504389 582 ntBASIC5.6□□□□□ -1.51
PKNOX1P55347 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
PKNOX1P55347 AC074255.1-201ENST00000511259 501 ntBASIC5.6□□□□□ -1.51
PKNOX1P55347 RNU6-964P-201ENST00000516524 69 ntBASIC5.6□□□□□ -1.51
PKNOX1P55347 AC009879.1-201ENST00000520029 839 ntBASIC5.6□□□□□ -1.51
PKNOX1P55347 AP003396.4-201ENST00000527574 265 ntBASIC5.6□□□□□ -1.51
PKNOX1P55347 AP003033.2-201ENST00000528901 805 ntBASIC5.6□□□□□ -1.51
PKNOX1P55347 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.6□□□□□ -1.51
PKNOX1P55347 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PKNOX1P55347 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.6□□□□□ -1.51
PKNOX1P55347 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC5.6□□□□□ -1.51
PKNOX1P55347 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.6□□□□□ -1.51
PKNOX1P55347 AC092266.1-201ENST00000610958 165 ntBASIC5.6□□□□□ -1.51
PKNOX1P55347 MIR6133-201ENST00000617057 108 ntBASIC5.6□□□□□ -1.51
PKNOX1P55347 MIR6721-201ENST00000617181 87 ntBASIC5.6□□□□□ -1.51
PKNOX1P55347 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PKNOX1P55347 AC005005.4-201ENST00000623789 16698 ntBASIC5.6□□□□□ -1.51
PKNOX1P55347 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PKNOX1P55347 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.6□□□□□ -1.51
PKNOX1P55347 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.6□□□□□ -1.51
PKNOX1P55347 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PKNOX1P55347 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PKNOX1P55347 AP000473.2-201ENST00000602659 1537 ntBASIC5.59□□□□□ -1.51
PKNOX1P55347 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.59□□□□□ -1.51
PKNOX1P55347 AC120036.2-201ENST00000509729 1474 ntBASIC5.59□□□□□ -1.51
PKNOX1P55347 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
PKNOX1P55347 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PKNOX1P55347 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms