Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.45□□□□□ -1.54
LIM2P55344 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.45□□□□□ -1.54
LIM2P55344 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.45□□□□□ -1.54
LIM2P55344 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.45□□□□□ -1.54
LIM2P55344 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.45□□□□□ -1.54
LIM2P55344 NENFP3-201ENST00000503735 313 ntBASIC5.45□□□□□ -1.54
LIM2P55344 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.45□□□□□ -1.54
LIM2P55344 SNORA70.20-201ENST00000516848 126 ntBASIC5.45□□□□□ -1.54
LIM2P55344 SCARNA6.1-201ENST00000516989 238 ntBASIC5.45□□□□□ -1.54
LIM2P55344 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
LIM2P55344 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.45□□□□□ -1.54
LIM2P55344 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.45□□□□□ -1.54
LIM2P55344 AC090888.3-201ENST00000558917 509 ntBASIC5.45□□□□□ -1.54
LIM2P55344 AC096996.1-201ENST00000563813 325 ntBASIC5.45□□□□□ -1.54
LIM2P55344 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.45□□□□□ -1.54
LIM2P55344 AL161912.3-201ENST00000605404 628 ntBASIC5.45□□□□□ -1.54
LIM2P55344 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
LIM2P55344 AP001153.1-201ENST00000641024 338 ntBASIC5.45□□□□□ -1.54
LIM2P55344 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
LIM2P55344 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.45□□□□□ -1.54
LIM2P55344 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
LIM2P55344 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
LIM2P55344 AC091305.2-201ENST00000624049 1576 ntBASIC5.45□□□□□ -1.54
LIM2P55344 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
LIM2P55344 AL049634.1-201ENST00000453770 1720 ntBASIC5.45□□□□□ -1.54
LIM2P55344 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
LIM2P55344 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LIM2P55344 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
LIM2P55344 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
LIM2P55344 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
LIM2P55344 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
LIM2P55344 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
LIM2P55344 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC5.44□□□□□ -1.54
LIM2P55344 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.44□□□□□ -1.54
LIM2P55344 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.44□□□□□ -1.54
LIM2P55344 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
LIM2P55344 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
LIM2P55344 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
LIM2P55344 OR56A4-201ENST00000330728 1209 ntBASIC5.44□□□□□ -1.54
LIM2P55344 RNA5SP91-201ENST00000390902 119 ntBASIC5.44□□□□□ -1.54
LIM2P55344 RPS3AP2-201ENST00000407190 754 ntBASIC5.44□□□□□ -1.54
LIM2P55344 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.44□□□□□ -1.54
LIM2P55344 AL354868.1-201ENST00000417077 482 ntBASIC5.44□□□□□ -1.54
LIM2P55344 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
LIM2P55344 NIFKP3-201ENST00000417799 865 ntBASIC5.44□□□□□ -1.54
LIM2P55344 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.44□□□□□ -1.54
LIM2P55344 VN1R21P-201ENST00000426703 765 ntBASIC5.44□□□□□ -1.54
LIM2P55344 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.44□□□□□ -1.54
LIM2P55344 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.44□□□□□ -1.54
LIM2P55344 AL136455.1-201ENST00000441083 1240 ntBASIC5.44□□□□□ -1.54
LIM2P55344 PCNPP2-201ENST00000441651 455 ntBASIC5.44□□□□□ -1.54
LIM2P55344 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
LIM2P55344 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.44□□□□□ -1.54
LIM2P55344 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
LIM2P55344 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
LIM2P55344 AC009120.1-201ENST00000493458 473 ntBASIC5.44□□□□□ -1.54
LIM2P55344 AC074255.1-201ENST00000511259 501 ntBASIC5.44□□□□□ -1.54
LIM2P55344 AC021678.3-201ENST00000517893 476 ntBASIC5.44□□□□□ -1.54
LIM2P55344 IGKV2-4-201ENST00000523070 340 ntBASIC5.44□□□□□ -1.54
LIM2P55344 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.44□□□□□ -1.54
LIM2P55344 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.44□□□□□ -1.54
LIM2P55344 AC100767.2-201ENST00000604840 693 ntBASIC5.44□□□□□ -1.54
LIM2P55344 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
LIM2P55344 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
LIM2P55344 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.44□□□□□ -1.54
LIM2P55344 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.44□□□□□ -1.54
LIM2P55344 AL355488.2-201ENST00000609909 2850 ntBASIC5.44□□□□□ -1.54
LIM2P55344 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
LIM2P55344 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
LIM2P55344 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
LIM2P55344 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
LIM2P55344 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
LIM2P55344 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
LIM2P55344 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
LIM2P55344 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.43□□□□□ -1.54
LIM2P55344 AC232271.1-201ENST00000602455 2715 ntBASIC5.43□□□□□ -1.54
LIM2P55344 AC106872.5-201ENST00000508856 1416 ntBASIC5.43□□□□□ -1.54
LIM2P55344 AL158152.1-201ENST00000602652 1435 ntBASIC5.43□□□□□ -1.54
LIM2P55344 AC114774.1-201ENST00000507410 1770 ntBASIC5.43□□□□□ -1.54
LIM2P55344 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
LIM2P55344 AL159987.1-201ENST00000347911 293 ntBASIC5.43□□□□□ -1.54
LIM2P55344 MIR375-201ENST00000362103 64 ntBASIC5.43□□□□□ -1.54
LIM2P55344 RPL11P3-201ENST00000395256 523 ntBASIC5.43□□□□□ -1.54
LIM2P55344 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.43□□□□□ -1.54
LIM2P55344 RN7SKP279-201ENST00000411383 298 ntBASIC5.43□□□□□ -1.54
LIM2P55344 SMC4P1-201ENST00000414479 527 ntBASIC5.43□□□□□ -1.54
LIM2P55344 IPPKP1-201ENST00000422501 768 ntBASIC5.43□□□□□ -1.54
LIM2P55344 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.43□□□□□ -1.54
LIM2P55344 NAP1L4P3-201ENST00000432820 1147 ntBASIC5.43□□□□□ -1.54
LIM2P55344 HMGB3P24-201ENST00000433260 622 ntBASIC5.43□□□□□ -1.54
LIM2P55344 BTG3P1-201ENST00000435859 716 ntBASIC5.43□□□□□ -1.54
LIM2P55344 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.43□□□□□ -1.54
LIM2P55344 AC084754.1-201ENST00000463466 464 ntBASIC5.43□□□□□ -1.54
LIM2P55344 RPSAP37-201ENST00000470913 821 ntBASIC5.43□□□□□ -1.54
LIM2P55344 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC5.43□□□□□ -1.54
LIM2P55344 RN7SL570P-201ENST00000484405 292 ntBASIC5.43□□□□□ -1.54
LIM2P55344 RPL32P33-201ENST00000487023 394 ntBASIC5.43□□□□□ -1.54
LIM2P55344 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.43□□□□□ -1.54
LIM2P55344 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.43□□□□□ -1.54
LIM2P55344 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms