Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 BX323845.3-201ENST00000428215 527 ntBASIC5.97□□□□□ -1.45
CDH6P55285 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
CDH6P55285 PCBP2P1-201ENST00000437262 977 ntBASIC5.97□□□□□ -1.45
CDH6P55285 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.97□□□□□ -1.45
CDH6P55285 DUTP1-201ENST00000493631 470 ntBASIC5.97□□□□□ -1.45
CDH6P55285 PFN1P8-201ENST00000497012 543 ntBASIC5.97□□□□□ -1.45
CDH6P55285 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
CDH6P55285 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.97□□□□□ -1.45
CDH6P55285 TRIM77BP-201ENST00000524985 1119 ntBASIC5.97□□□□□ -1.45
CDH6P55285 HMGN2P36-201ENST00000529541 409 ntBASIC5.97□□□□□ -1.45
CDH6P55285 AP000648.1-201ENST00000529682 397 ntBASIC5.97□□□□□ -1.45
CDH6P55285 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.97□□□□□ -1.45
CDH6P55285 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.97□□□□□ -1.45
CDH6P55285 AC096996.1-201ENST00000563813 325 ntBASIC5.97□□□□□ -1.45
CDH6P55285 ZNF322P1-201ENST00000568013 1209 ntBASIC5.97□□□□□ -1.45
CDH6P55285 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.97□□□□□ -1.45
CDH6P55285 MIR4260-201ENST00000583107 67 ntBASIC5.97□□□□□ -1.45
CDH6P55285 AC079315.1-201ENST00000602952 623 ntBASIC5.97□□□□□ -1.45
CDH6P55285 AL031601.1-201ENST00000605702 394 ntBASIC5.97□□□□□ -1.45
CDH6P55285 NANOGP3-201ENST00000605855 286 ntBASIC5.97□□□□□ -1.45
CDH6P55285 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CDH6P55285 AL035661.1-201ENST00000620459 1144 ntBASIC5.97□□□□□ -1.45
CDH6P55285 AC022400.9-201ENST00000623633 273 ntBASIC5.97□□□□□ -1.45
CDH6P55285 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
CDH6P55285 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CDH6P55285 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.97□□□□□ -1.45
CDH6P55285 AL132656.3-201ENST00000606384 1595 ntBASIC5.97□□□□□ -1.45
CDH6P55285 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
CDH6P55285 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CDH6P55285 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CDH6P55285 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CDH6P55285 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.96□□□□□ -1.45
CDH6P55285 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
CDH6P55285 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.96□□□□□ -1.45
CDH6P55285 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.96□□□□□ -1.45
CDH6P55285 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.45
CDH6P55285 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.45
CDH6P55285 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
CDH6P55285 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.96□□□□□ -1.46
CDH6P55285 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CDH6P55285 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CDH6P55285 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CDH6P55285 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CDH6P55285 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CDH6P55285 MIR130A-201ENST00000385274 89 ntBASIC5.96□□□□□ -1.46
CDH6P55285 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
CDH6P55285 AC087752.1-201ENST00000391360 558 ntBASIC5.96□□□□□ -1.46
CDH6P55285 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.96□□□□□ -1.46
CDH6P55285 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.96□□□□□ -1.46
CDH6P55285 RN7SKP240-201ENST00000410583 375 ntBASIC5.96□□□□□ -1.46
CDH6P55285 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.96□□□□□ -1.46
CDH6P55285 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.96□□□□□ -1.46
CDH6P55285 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.96□□□□□ -1.46
CDH6P55285 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CDH6P55285 AC073072.2-201ENST00000447425 348 ntBASIC5.96□□□□□ -1.46
CDH6P55285 ACA64.1-201ENST00000459171 127 ntBASIC5.96□□□□□ -1.46
CDH6P55285 RPS23P2-201ENST00000463671 415 ntBASIC5.96□□□□□ -1.46
CDH6P55285 AC012123.2-201ENST00000485809 248 ntBASIC5.96□□□□□ -1.46
CDH6P55285 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.96□□□□□ -1.46
CDH6P55285 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.96□□□□□ -1.46
CDH6P55285 AC114781.3-201ENST00000512083 142 ntBASIC5.96□□□□□ -1.46
CDH6P55285 AC021146.10-201ENST00000515628 706 ntBASIC5.96□□□□□ -1.46
CDH6P55285 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC5.96□□□□□ -1.46
CDH6P55285 AC068305.2-201ENST00000550567 1205 ntBASIC5.96□□□□□ -1.46
CDH6P55285 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.96□□□□□ -1.46
CDH6P55285 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.96□□□□□ -1.46
CDH6P55285 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.96□□□□□ -1.46
CDH6P55285 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.96□□□□□ -1.46
CDH6P55285 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
CDH6P55285 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CDH6P55285 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.96□□□□□ -1.46
CDH6P55285 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
CDH6P55285 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.96□□□□□ -1.46
CDH6P55285 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CDH6P55285 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.96□□□□□ -1.46
CDH6P55285 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CDH6P55285 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CDH6P55285 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CDH6P55285 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
CDH6P55285 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
CDH6P55285 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CDH6P55285 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
CDH6P55285 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
CDH6P55285 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CDH6P55285 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CDH6P55285 RNU1-150P-201ENST00000362491 162 ntBASIC5.95□□□□□ -1.46
CDH6P55285 RNU1-136P-201ENST00000384181 164 ntBASIC5.95□□□□□ -1.46
CDH6P55285 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.95□□□□□ -1.46
CDH6P55285 MIR1203-201ENST00000408812 85 ntBASIC5.95□□□□□ -1.46
CDH6P55285 NIFKP3-201ENST00000417799 865 ntBASIC5.95□□□□□ -1.46
CDH6P55285 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.95□□□□□ -1.46
CDH6P55285 AC066692.1-201ENST00000421721 457 ntBASIC5.95□□□□□ -1.46
CDH6P55285 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CDH6P55285 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.95□□□□□ -1.46
CDH6P55285 RPL5P10-201ENST00000445207 894 ntBASIC5.95□□□□□ -1.46
CDH6P55285 UBE2V2P4-201ENST00000447495 259 ntBASIC5.95□□□□□ -1.46
CDH6P55285 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.95□□□□□ -1.46
CDH6P55285 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CDH6P55285 RPS7P6-201ENST00000485777 579 ntBASIC5.95□□□□□ -1.46
CDH6P55285 RPL32P33-201ENST00000487023 394 ntBASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms