Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 NENFP1-201ENST00000419476 466 ntBASIC6.22□□□□□ -1.41
CASP4P49662 AKR1B10P1-201ENST00000425765 942 ntBASIC6.22□□□□□ -1.41
CASP4P49662 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.22□□□□□ -1.41
CASP4P49662 RPS10P18-201ENST00000442662 495 ntBASIC6.22□□□□□ -1.41
CASP4P49662 RPS23P9-201ENST00000448848 438 ntBASIC6.22□□□□□ -1.41
CASP4P49662 RN7SL570P-201ENST00000484405 292 ntBASIC6.22□□□□□ -1.41
CASP4P49662 NENFP3-201ENST00000503735 313 ntBASIC6.22□□□□□ -1.41
CASP4P49662 IGLV3-24-201ENST00000517477 197 ntBASIC6.22□□□□□ -1.41
CASP4P49662 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC6.22□□□□□ -1.41
CASP4P49662 AP004609.2-201ENST00000532177 190 ntBASIC6.22□□□□□ -1.41
CASP4P49662 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC6.22□□□□□ -1.41
CASP4P49662 AC137627.1-201ENST00000545761 289 ntBASIC6.22□□□□□ -1.41
CASP4P49662 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC6.22□□□□□ -1.41
CASP4P49662 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC6.22□□□□□ -1.41
CASP4P49662 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC6.22□□□□□ -1.41
CASP4P49662 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC6.22□□□□□ -1.41
CASP4P49662 MIR4260-201ENST00000583107 67 ntBASIC6.22□□□□□ -1.41
CASP4P49662 AL049840.6-201ENST00000604583 345 ntBASIC6.22□□□□□ -1.41
CASP4P49662 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CASP4P49662 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
CASP4P49662 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.22□□□□□ -1.41
CASP4P49662 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
CASP4P49662 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
CASP4P49662 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
CASP4P49662 AL158152.1-201ENST00000602652 1435 ntBASIC6.22□□□□□ -1.41
CASP4P49662 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
CASP4P49662 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
CASP4P49662 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
CASP4P49662 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
CASP4P49662 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
CASP4P49662 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.22□□□□□ -1.41
CASP4P49662 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.22□□□□□ -1.41
CASP4P49662 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.22□□□□□ -1.41
CASP4P49662 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.41
CASP4P49662 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
CASP4P49662 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC6.21□□□□□ -1.41
CASP4P49662 EEF1A1P33-201ENST00000554413 1362 ntBASIC6.21□□□□□ -1.41
CASP4P49662 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC6.21□□□□□ -1.41
CASP4P49662 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.21□□□□□ -1.41
CASP4P49662 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.21□□□□□ -1.41
CASP4P49662 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
CASP4P49662 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.21□□□□□ -1.41
CASP4P49662 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC6.21□□□□□ -1.41
CASP4P49662 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.21□□□□□ -1.42
CASP4P49662 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
CASP4P49662 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CASP4P49662 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CASP4P49662 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CASP4P49662 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CASP4P49662 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
CASP4P49662 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC6.21□□□□□ -1.42
CASP4P49662 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
CASP4P49662 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
CASP4P49662 RPL11P3-201ENST00000395256 523 ntBASIC6.21□□□□□ -1.42
CASP4P49662 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.21□□□□□ -1.42
CASP4P49662 HMGB1P20-201ENST00000402555 677 ntBASIC6.21□□□□□ -1.42
CASP4P49662 AK4P4-201ENST00000419465 646 ntBASIC6.21□□□□□ -1.42
CASP4P49662 NME1P1-201ENST00000420914 382 ntBASIC6.21□□□□□ -1.42
CASP4P49662 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.21□□□□□ -1.42
CASP4P49662 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC6.21□□□□□ -1.42
CASP4P49662 AC073109.1-201ENST00000445066 978 ntBASIC6.21□□□□□ -1.42
CASP4P49662 RPS23P2-201ENST00000463671 415 ntBASIC6.21□□□□□ -1.42
CASP4P49662 RPL12P24-201ENST00000474907 486 ntBASIC6.21□□□□□ -1.42
CASP4P49662 AC090058.1-201ENST00000498788 435 ntBASIC6.21□□□□□ -1.42
CASP4P49662 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC6.21□□□□□ -1.42
CASP4P49662 AC074255.1-201ENST00000511259 501 ntBASIC6.21□□□□□ -1.42
CASP4P49662 SNORA70.20-201ENST00000516848 126 ntBASIC6.21□□□□□ -1.42
CASP4P49662 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6.21□□□□□ -1.42
CASP4P49662 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC6.21□□□□□ -1.42
CASP4P49662 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC6.21□□□□□ -1.42
CASP4P49662 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC6.21□□□□□ -1.42
CASP4P49662 AGGF1P7-201ENST00000562369 913 ntBASIC6.21□□□□□ -1.42
CASP4P49662 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.42
CASP4P49662 NDUFA5P11-201ENST00000567995 343 ntBASIC6.21□□□□□ -1.42
CASP4P49662 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC6.21□□□□□ -1.42
CASP4P49662 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CASP4P49662 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CASP4P49662 AL355834.1-201ENST00000556602 3965 ntBASIC6.21□□□□□ -1.42
CASP4P49662 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CASP4P49662 AC123769.1-201ENST00000530992 3192 ntBASIC6.21□□□□□ -1.42
CASP4P49662 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC6.21□□□□□ -1.42
CASP4P49662 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC6.21□□□□□ -1.42
CASP4P49662 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
CASP4P49662 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
CASP4P49662 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
CASP4P49662 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CASP4P49662 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC6.2□□□□□ -1.42
CASP4P49662 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
CASP4P49662 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
CASP4P49662 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
CASP4P49662 AC239868.2-201ENST00000564237 4527 ntBASIC6.2□□□□□ -1.42
CASP4P49662 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
CASP4P49662 AL049634.1-201ENST00000453770 1720 ntBASIC6.2□□□□□ -1.42
CASP4P49662 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
CASP4P49662 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
CASP4P49662 RNA5SP394-201ENST00000364216 119 ntBASIC6.2□□□□□ -1.42
CASP4P49662 RNA5SP30-201ENST00000365552 115 ntBASIC6.2□□□□□ -1.42
CASP4P49662 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
CASP4P49662 AC005042.1-201ENST00000393397 800 ntBASIC6.2□□□□□ -1.42
CASP4P49662 RPS6P23-201ENST00000413224 722 ntBASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms