Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 AL589765.6-201ENST00000601909 549 ntBASIC5.05□□□□□ -1.6
CDX1P47902 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.05□□□□□ -1.6
CDX1P47902 IGKV2OR2-1-201ENST00000605129 304 ntBASIC5.05□□□□□ -1.6
CDX1P47902 AC005021.1-201ENST00000608730 355 ntBASIC5.05□□□□□ -1.6
CDX1P47902 MIR6780B-201ENST00000610307 79 ntBASIC5.05□□□□□ -1.6
CDX1P47902 AP001264.1-201ENST00000620602 703 ntBASIC5.05□□□□□ -1.6
CDX1P47902 AC069234.4-201ENST00000621276 412 ntBASIC5.05□□□□□ -1.6
CDX1P47902 AC079298.2-201ENST00000623885 459 ntBASIC5.05□□□□□ -1.6
CDX1P47902 AC092159.4-201ENST00000624944 550 ntBASIC5.05□□□□□ -1.6
CDX1P47902 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC5.05□□□□□ -1.6
CDX1P47902 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CDX1P47902 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.05□□□□□ -1.6
CDX1P47902 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.05□□□□□ -1.6
CDX1P47902 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CDX1P47902 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.05□□□□□ -1.6
CDX1P47902 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CDX1P47902 AC022164.1-201ENST00000568767 2673 ntBASIC5.05□□□□□ -1.6
CDX1P47902 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CDX1P47902 BTK-209ENST00000618050 2417 ntTSL 5 BASIC5.05□□□□□ -1.6
CDX1P47902 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CDX1P47902 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CDX1P47902 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CDX1P47902 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CDX1P47902 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CDX1P47902 RPL31P11-201ENST00000426558 1558 ntBASIC5.04□□□□□ -1.6
CDX1P47902 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.04□□□□□ -1.6
CDX1P47902 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
CDX1P47902 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CDX1P47902 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC5.04□□□□□ -1.6
CDX1P47902 BIN2P1-201ENST00000504996 1530 ntBASIC5.04□□□□□ -1.6
CDX1P47902 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CDX1P47902 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CDX1P47902 RNA5SP350-201ENST00000363298 111 ntBASIC5.04□□□□□ -1.6
CDX1P47902 RN7SKP86-201ENST00000410454 332 ntBASIC5.04□□□□□ -1.6
CDX1P47902 NENFP1-201ENST00000419476 466 ntBASIC5.04□□□□□ -1.6
CDX1P47902 RPL24P2-201ENST00000421023 475 ntBASIC5.04□□□□□ -1.6
CDX1P47902 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.04□□□□□ -1.6
CDX1P47902 MGAT2P2-201ENST00000427194 797 ntBASIC5.04□□□□□ -1.6
CDX1P47902 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC5.04□□□□□ -1.6
CDX1P47902 RPSAP32-201ENST00000432681 526 ntBASIC5.04□□□□□ -1.6
CDX1P47902 SEPHS1P4-201ENST00000446112 1176 ntBASIC5.04□□□□□ -1.6
CDX1P47902 AC097359.1-201ENST00000447946 463 ntBASIC5.04□□□□□ -1.6
CDX1P47902 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CDX1P47902 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.04□□□□□ -1.6
CDX1P47902 RN7SL168P-201ENST00000463821 279 ntBASIC5.04□□□□□ -1.6
CDX1P47902 AC107015.1-201ENST00000466902 747 ntBASIC5.04□□□□□ -1.6
CDX1P47902 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CDX1P47902 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.04□□□□□ -1.6
CDX1P47902 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC5.04□□□□□ -1.6
CDX1P47902 RPL5P14-201ENST00000494197 878 ntBASIC5.04□□□□□ -1.6
CDX1P47902 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CDX1P47902 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC5.04□□□□□ -1.6
CDX1P47902 AC122718.2-201ENST00000505325 591 ntBASIC5.04□□□□□ -1.6
CDX1P47902 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC5.04□□□□□ -1.6
CDX1P47902 MTND2P31-201ENST00000512602 616 ntBASIC5.04□□□□□ -1.6
CDX1P47902 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
CDX1P47902 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC5.04□□□□□ -1.6
CDX1P47902 AC026688.1-201ENST00000520639 1168 ntBASIC5.04□□□□□ -1.6
CDX1P47902 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC5.04□□□□□ -1.6
CDX1P47902 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC5.04□□□□□ -1.6
CDX1P47902 OR4A40P-201ENST00000533878 948 ntBASIC5.04□□□□□ -1.6
CDX1P47902 AC073916.1-201ENST00000545095 130 ntBASIC5.04□□□□□ -1.6
CDX1P47902 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC5.04□□□□□ -1.6
CDX1P47902 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC5.04□□□□□ -1.6
CDX1P47902 AC090651.1-201ENST00000567865 634 ntBASIC5.04□□□□□ -1.6
CDX1P47902 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC5.04□□□□□ -1.6
CDX1P47902 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC5.04□□□□□ -1.6
CDX1P47902 AC027216.1-201ENST00000577726 685 ntBASIC5.04□□□□□ -1.6
CDX1P47902 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CDX1P47902 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC5.04□□□□□ -1.6
CDX1P47902 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.04□□□□□ -1.6
CDX1P47902 MTCO2P22-201ENST00000603246 681 ntBASIC5.04□□□□□ -1.6
CDX1P47902 AC005828.7-201ENST00000607331 556 ntBASIC5.04□□□□□ -1.6
CDX1P47902 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.04□□□□□ -1.6
CDX1P47902 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.04□□□□□ -1.6
CDX1P47902 MIR7109-201ENST00000613748 65 ntBASIC5.04□□□□□ -1.6
CDX1P47902 MIR6811-201ENST00000620409 58 ntBASIC5.04□□□□□ -1.6
CDX1P47902 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC5.04□□□□□ -1.6
CDX1P47902 LINC02495-203ENST00000636704 242 ntBASIC5.04□□□□□ -1.6
CDX1P47902 CASC19-274ENST00000642018 970 ntBASIC5.04□□□□□ -1.6
CDX1P47902 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CDX1P47902 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
CDX1P47902 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CDX1P47902 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CDX1P47902 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
CDX1P47902 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CDX1P47902 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CDX1P47902 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CDX1P47902 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CDX1P47902 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
CDX1P47902 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CDX1P47902 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC5.04□□□□□ -1.6
CDX1P47902 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CDX1P47902 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
CDX1P47902 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CDX1P47902 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CDX1P47902 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CDX1P47902 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CDX1P47902 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC5.03□□□□□ -1.6
CDX1P47902 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 133.1 ms