Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.44□□□□□ -1.54
APOBEC1P41238 AC112206.4-201ENST00000515142 405 ntBASIC5.44□□□□□ -1.54
APOBEC1P41238 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.44□□□□□ -1.54
APOBEC1P41238 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
APOBEC1P41238 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
APOBEC1P41238 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.44□□□□□ -1.54
APOBEC1P41238 AC134349.2-201ENST00000535136 910 ntBASIC5.44□□□□□ -1.54
APOBEC1P41238 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.44□□□□□ -1.54
APOBEC1P41238 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC5.44□□□□□ -1.54
APOBEC1P41238 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.44□□□□□ -1.54
APOBEC1P41238 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
APOBEC1P41238 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC5.44□□□□□ -1.54
APOBEC1P41238 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
APOBEC1P41238 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.44□□□□□ -1.54
APOBEC1P41238 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.44□□□□□ -1.54
APOBEC1P41238 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
APOBEC1P41238 AC068768.2-201ENST00000602352 343 ntBASIC5.44□□□□□ -1.54
APOBEC1P41238 OR51C1P-201ENST00000608504 942 ntBASIC5.44□□□□□ -1.54
APOBEC1P41238 AC135803.1-201ENST00000608748 565 ntBASIC5.44□□□□□ -1.54
APOBEC1P41238 AC092266.1-201ENST00000610958 165 ntBASIC5.44□□□□□ -1.54
APOBEC1P41238 MIR7109-201ENST00000613748 65 ntBASIC5.44□□□□□ -1.54
APOBEC1P41238 AL512506.1-201ENST00000613918 449 ntBASIC5.44□□□□□ -1.54
APOBEC1P41238 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.44□□□□□ -1.54
APOBEC1P41238 AC004801.6-201ENST00000616571 978 ntBASIC5.44□□□□□ -1.54
APOBEC1P41238 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.44□□□□□ -1.54
APOBEC1P41238 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.44□□□□□ -1.54
APOBEC1P41238 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.44□□□□□ -1.54
APOBEC1P41238 MAPK10-350ENST00000641777 965 ntBASIC5.44□□□□□ -1.54
APOBEC1P41238 AL161901.1-201ENST00000624954 3425 ntBASIC5.44□□□□□ -1.54
APOBEC1P41238 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
APOBEC1P41238 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
APOBEC1P41238 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
APOBEC1P41238 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.44□□□□□ -1.54
APOBEC1P41238 AC012254.3-201ENST00000591183 2117 ntBASIC5.44□□□□□ -1.54
APOBEC1P41238 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.44□□□□□ -1.54
APOBEC1P41238 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
APOBEC1P41238 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
APOBEC1P41238 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
APOBEC1P41238 NAMPTP1-201ENST00000440465 2514 ntBASIC5.43□□□□□ -1.54
APOBEC1P41238 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
APOBEC1P41238 OFD1P17-201ENST00000437639 3018 ntBASIC5.43□□□□□ -1.54
APOBEC1P41238 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
APOBEC1P41238 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
APOBEC1P41238 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
APOBEC1P41238 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
APOBEC1P41238 RNA5SP514-201ENST00000363717 111 ntBASIC5.43□□□□□ -1.54
APOBEC1P41238 RNU1-65P-201ENST00000363919 148 ntBASIC5.43□□□□□ -1.54
APOBEC1P41238 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.43□□□□□ -1.54
APOBEC1P41238 ST13P16-201ENST00000401760 781 ntBASIC5.43□□□□□ -1.54
APOBEC1P41238 RPL7P58-201ENST00000402913 758 ntBASIC5.43□□□□□ -1.54
APOBEC1P41238 NPM1P38-201ENST00000403835 865 ntBASIC5.43□□□□□ -1.54
APOBEC1P41238 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC5.43□□□□□ -1.54
APOBEC1P41238 AL357078.2-201ENST00000416486 427 ntBASIC5.43□□□□□ -1.54
APOBEC1P41238 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.43□□□□□ -1.54
APOBEC1P41238 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.43□□□□□ -1.54
APOBEC1P41238 AC245884.2-201ENST00000426257 404 ntBASIC5.43□□□□□ -1.54
APOBEC1P41238 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.43□□□□□ -1.54
APOBEC1P41238 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC5.43□□□□□ -1.54
APOBEC1P41238 PNKDP1-201ENST00000435914 430 ntBASIC5.43□□□□□ -1.54
APOBEC1P41238 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC5.43□□□□□ -1.54
APOBEC1P41238 SDC4P-201ENST00000453285 601 ntBASIC5.43□□□□□ -1.54
APOBEC1P41238 AC019084.1-201ENST00000457337 432 ntBASIC5.43□□□□□ -1.54
APOBEC1P41238 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC5.43□□□□□ -1.54
APOBEC1P41238 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC5.43□□□□□ -1.54
APOBEC1P41238 AC104164.1-201ENST00000460282 590 ntBASIC5.43□□□□□ -1.54
APOBEC1P41238 AC023245.1-201ENST00000468501 517 ntBASIC5.43□□□□□ -1.54
APOBEC1P41238 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.43□□□□□ -1.54
APOBEC1P41238 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC5.43□□□□□ -1.54
APOBEC1P41238 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.43□□□□□ -1.54
APOBEC1P41238 AC025768.1-201ENST00000510057 267 ntBASIC5.43□□□□□ -1.54
APOBEC1P41238 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.43□□□□□ -1.54
APOBEC1P41238 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC5.43□□□□□ -1.54
APOBEC1P41238 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.43□□□□□ -1.54
APOBEC1P41238 SETP21-201ENST00000514799 892 ntBASIC5.43□□□□□ -1.54
APOBEC1P41238 AP003396.4-201ENST00000527574 265 ntBASIC5.43□□□□□ -1.54
APOBEC1P41238 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.43□□□□□ -1.54
APOBEC1P41238 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.43□□□□□ -1.54
APOBEC1P41238 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.43□□□□□ -1.54
APOBEC1P41238 CR383656.14-201ENST00000551951 406 ntBASIC5.43□□□□□ -1.54
APOBEC1P41238 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.43□□□□□ -1.54
APOBEC1P41238 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
APOBEC1P41238 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
APOBEC1P41238 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.43□□□□□ -1.54
APOBEC1P41238 AC098483.2-201ENST00000603158 454 ntBASIC5.43□□□□□ -1.54
APOBEC1P41238 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.43□□□□□ -1.54
APOBEC1P41238 AL158211.2-201ENST00000607282 395 ntBASIC5.43□□□□□ -1.54
APOBEC1P41238 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5.43□□□□□ -1.54
APOBEC1P41238 AC245014.3-201ENST00000618589 347 ntBASIC5.43□□□□□ -1.54
APOBEC1P41238 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.43□□□□□ -1.54
APOBEC1P41238 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
APOBEC1P41238 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.43□□□□□ -1.54
APOBEC1P41238 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
APOBEC1P41238 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
APOBEC1P41238 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.43□□□□□ -1.54
APOBEC1P41238 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
APOBEC1P41238 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.43□□□□□ -1.54
APOBEC1P41238 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.43□□□□□ -1.54
APOBEC1P41238 QRSL1P1-201ENST00000400977 1540 ntBASIC5.43□□□□□ -1.54
APOBEC1P41238 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.43□□□□□ -1.54
APOBEC1P41238 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms