Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 AC083795.1-201ENST00000491760 320 ntBASIC5.84□□□□□ -1.47
HNF4AP41235 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.84□□□□□ -1.47
HNF4AP41235 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.84□□□□□ -1.47
HNF4AP41235 AL049874.4-201ENST00000557593 255 ntBASIC5.84□□□□□ -1.47
HNF4AP41235 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC5.84□□□□□ -1.47
HNF4AP41235 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.84□□□□□ -1.47
HNF4AP41235 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.84□□□□□ -1.47
HNF4AP41235 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.84□□□□□ -1.47
HNF4AP41235 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.84□□□□□ -1.47
HNF4AP41235 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.84□□□□□ -1.47
HNF4AP41235 AP001267.4-201ENST00000602598 545 ntBASIC5.84□□□□□ -1.47
HNF4AP41235 AC091167.5-201ENST00000605689 894 ntBASIC5.84□□□□□ -1.47
HNF4AP41235 AC093388.1-201ENST00000609166 430 ntBASIC5.84□□□□□ -1.47
HNF4AP41235 AL359091.2-201ENST00000609303 556 ntBASIC5.84□□□□□ -1.47
HNF4AP41235 AC006840.1-201ENST00000623069 542 ntBASIC5.84□□□□□ -1.47
HNF4AP41235 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.84□□□□□ -1.47
HNF4AP41235 CASC19-274ENST00000642018 970 ntBASIC5.84□□□□□ -1.47
HNF4AP41235 AC092070.2-203ENST00000598377 3644 ntBASIC5.84□□□□□ -1.47
HNF4AP41235 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
HNF4AP41235 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
HNF4AP41235 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
HNF4AP41235 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.84□□□□□ -1.47
HNF4AP41235 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
HNF4AP41235 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
HNF4AP41235 AC087516.1-201ENST00000561236 2428 ntBASIC5.84□□□□□ -1.48
HNF4AP41235 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
HNF4AP41235 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HNF4AP41235 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HNF4AP41235 AC022164.1-201ENST00000568767 2673 ntBASIC5.83□□□□□ -1.48
HNF4AP41235 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HNF4AP41235 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HNF4AP41235 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HNF4AP41235 SAMM50P1-201ENST00000455403 1399 ntBASIC5.83□□□□□ -1.48
HNF4AP41235 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HNF4AP41235 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
HNF4AP41235 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.83□□□□□ -1.48
HNF4AP41235 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.83□□□□□ -1.48
HNF4AP41235 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.83□□□□□ -1.48
HNF4AP41235 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HNF4AP41235 ARAFP1-201ENST00000422172 605 ntBASIC5.83□□□□□ -1.48
HNF4AP41235 SETP10-201ENST00000424368 814 ntBASIC5.83□□□□□ -1.48
HNF4AP41235 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.83□□□□□ -1.48
HNF4AP41235 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.83□□□□□ -1.48
HNF4AP41235 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.83□□□□□ -1.48
HNF4AP41235 AC023141.3-201ENST00000436698 278 ntBASIC5.83□□□□□ -1.48
HNF4AP41235 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.83□□□□□ -1.48
HNF4AP41235 AC016027.4-201ENST00000450866 277 ntBASIC5.83□□□□□ -1.48
HNF4AP41235 PPIAP7-201ENST00000454070 489 ntBASIC5.83□□□□□ -1.48
HNF4AP41235 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC5.83□□□□□ -1.48
HNF4AP41235 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.83□□□□□ -1.48
HNF4AP41235 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HNF4AP41235 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.83□□□□□ -1.48
HNF4AP41235 OR7E99P-201ENST00000505750 922 ntBASIC5.83□□□□□ -1.48
HNF4AP41235 AP000620.1-201ENST00000527147 504 ntBASIC5.83□□□□□ -1.48
HNF4AP41235 EIF4A2P5-201ENST00000529914 499 ntBASIC5.83□□□□□ -1.48
HNF4AP41235 AC084121.1-201ENST00000533882 835 ntBASIC5.83□□□□□ -1.48
HNF4AP41235 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC5.83□□□□□ -1.48
HNF4AP41235 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HNF4AP41235 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.83□□□□□ -1.48
HNF4AP41235 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.83□□□□□ -1.48
HNF4AP41235 MIR4701-201ENST00000583094 63 ntBASIC5.83□□□□□ -1.48
HNF4AP41235 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.83□□□□□ -1.48
HNF4AP41235 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.83□□□□□ -1.48
HNF4AP41235 AC124916.2-201ENST00000604416 224 ntBASIC5.83□□□□□ -1.48
HNF4AP41235 AL645933.2-201ENST00000606743 1207 ntBASIC5.83□□□□□ -1.48
HNF4AP41235 AC073389.3-201ENST00000609434 935 ntBASIC5.83□□□□□ -1.48
HNF4AP41235 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
HNF4AP41235 AL596275.2-207ENST00000641188 675 ntBASIC5.83□□□□□ -1.48
HNF4AP41235 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HNF4AP41235 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HNF4AP41235 AL137141.1-201ENST00000624622 4836 ntBASIC5.83□□□□□ -1.48
HNF4AP41235 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
HNF4AP41235 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HNF4AP41235 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
HNF4AP41235 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HNF4AP41235 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HNF4AP41235 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
HNF4AP41235 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.83□□□□□ -1.48
HNF4AP41235 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
HNF4AP41235 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.83□□□□□ -1.48
HNF4AP41235 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
HNF4AP41235 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.82□□□□□ -1.48
HNF4AP41235 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HNF4AP41235 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
HNF4AP41235 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HNF4AP41235 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.82□□□□□ -1.48
HNF4AP41235 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.82□□□□□ -1.48
HNF4AP41235 OR10R3P-201ENST00000361688 942 ntBASIC5.82□□□□□ -1.48
HNF4AP41235 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HNF4AP41235 MT-RNR1-201ENST00000389680 954 ntBASIC5.82□□□□□ -1.48
HNF4AP41235 RNA5SP105-201ENST00000391123 113 ntBASIC5.82□□□□□ -1.48
HNF4AP41235 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
HNF4AP41235 HMGB3P7-201ENST00000400214 611 ntBASIC5.82□□□□□ -1.48
HNF4AP41235 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.82□□□□□ -1.48
HNF4AP41235 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC5.82□□□□□ -1.48
HNF4AP41235 AC113412.1-201ENST00000425840 504 ntBASIC5.82□□□□□ -1.48
HNF4AP41235 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC5.82□□□□□ -1.48
HNF4AP41235 AL353662.1-201ENST00000439099 327 ntBASIC5.82□□□□□ -1.48
HNF4AP41235 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.82□□□□□ -1.48
HNF4AP41235 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms