Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.78□□□□□ -1.48
HMGCLP35914 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.78□□□□□ -1.48
HMGCLP35914 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.78□□□□□ -1.48
HMGCLP35914 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
HMGCLP35914 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HMGCLP35914 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
HMGCLP35914 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
HMGCLP35914 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HMGCLP35914 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
HMGCLP35914 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
HMGCLP35914 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.78□□□□□ -1.48
HMGCLP35914 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
HMGCLP35914 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HMGCLP35914 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.78□□□□□ -1.48
HMGCLP35914 RPL11P3-201ENST00000395256 523 ntBASIC5.78□□□□□ -1.48
HMGCLP35914 OOSP1-201ENST00000398992 1270 ntBASIC5.78□□□□□ -1.48
HMGCLP35914 REREP1Y-201ENST00000422655 198 ntBASIC5.78□□□□□ -1.48
HMGCLP35914 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.78□□□□□ -1.48
HMGCLP35914 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.78□□□□□ -1.48
HMGCLP35914 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.78□□□□□ -1.48
HMGCLP35914 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.78□□□□□ -1.48
HMGCLP35914 REREP2Y-201ENST00000439103 200 ntBASIC5.78□□□□□ -1.48
HMGCLP35914 AL138899.2-201ENST00000439139 499 ntBASIC5.78□□□□□ -1.48
HMGCLP35914 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.78□□□□□ -1.48
HMGCLP35914 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.78□□□□□ -1.48
HMGCLP35914 AC006499.4-201ENST00000510947 694 ntBASIC5.78□□□□□ -1.48
HMGCLP35914 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.78□□□□□ -1.48
HMGCLP35914 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.78□□□□□ -1.48
HMGCLP35914 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC5.78□□□□□ -1.48
HMGCLP35914 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.78□□□□□ -1.48
HMGCLP35914 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
HMGCLP35914 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HMGCLP35914 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HMGCLP35914 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.78□□□□□ -1.48
HMGCLP35914 AL513327.3-201ENST00000602618 469 ntBASIC5.78□□□□□ -1.48
HMGCLP35914 MIR6778-201ENST00000617912 73 ntBASIC5.78□□□□□ -1.48
HMGCLP35914 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HMGCLP35914 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HMGCLP35914 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.78□□□□□ -1.48
HMGCLP35914 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.78□□□□□ -1.48
HMGCLP35914 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HMGCLP35914 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
HMGCLP35914 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
HMGCLP35914 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
HMGCLP35914 AL137058.3-201ENST00000624531 3099 ntBASIC5.78□□□□□ -1.48
HMGCLP35914 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HMGCLP35914 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.77□□□□□ -1.48
HMGCLP35914 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.77□□□□□ -1.48
HMGCLP35914 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.77□□□□□ -1.49
HMGCLP35914 AC025470.1-201ENST00000510053 2032 ntBASIC5.77□□□□□ -1.49
HMGCLP35914 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.77□□□□□ -1.49
HMGCLP35914 AP001284.1-201ENST00000528393 2118 ntBASIC5.77□□□□□ -1.49
HMGCLP35914 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HMGCLP35914 AL158152.1-201ENST00000602652 1435 ntBASIC5.77□□□□□ -1.49
HMGCLP35914 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
HMGCLP35914 OR56A4-201ENST00000330728 1209 ntBASIC5.77□□□□□ -1.49
HMGCLP35914 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.77□□□□□ -1.49
HMGCLP35914 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
HMGCLP35914 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.77□□□□□ -1.49
HMGCLP35914 AL357752.1-201ENST00000412817 349 ntBASIC5.77□□□□□ -1.49
HMGCLP35914 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.77□□□□□ -1.49
HMGCLP35914 GAPDHP48-201ENST00000436626 961 ntBASIC5.77□□□□□ -1.49
HMGCLP35914 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC5.77□□□□□ -1.49
HMGCLP35914 RPS10P18-201ENST00000442662 495 ntBASIC5.77□□□□□ -1.49
HMGCLP35914 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC5.77□□□□□ -1.49
HMGCLP35914 OR7E116P-201ENST00000448529 957 ntBASIC5.77□□□□□ -1.49
HMGCLP35914 RN7SL570P-201ENST00000484405 292 ntBASIC5.77□□□□□ -1.49
HMGCLP35914 NENFP3-201ENST00000503735 313 ntBASIC5.77□□□□□ -1.49
HMGCLP35914 SNORA70.20-201ENST00000516848 126 ntBASIC5.77□□□□□ -1.49
HMGCLP35914 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.77□□□□□ -1.49
HMGCLP35914 AC139365.2-201ENST00000517972 253 ntBASIC5.77□□□□□ -1.49
HMGCLP35914 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.77□□□□□ -1.49
HMGCLP35914 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.77□□□□□ -1.49
HMGCLP35914 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.77□□□□□ -1.49
HMGCLP35914 AC096996.1-201ENST00000563813 325 ntBASIC5.77□□□□□ -1.49
HMGCLP35914 AL359742.1-201ENST00000622497 540 ntBASIC5.77□□□□□ -1.49
HMGCLP35914 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
HMGCLP35914 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
HMGCLP35914 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.77□□□□□ -1.49
HMGCLP35914 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HMGCLP35914 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HMGCLP35914 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.77□□□□□ -1.49
HMGCLP35914 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
HMGCLP35914 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HMGCLP35914 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HMGCLP35914 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
HMGCLP35914 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
HMGCLP35914 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.76□□□□□ -1.49
HMGCLP35914 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HMGCLP35914 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HMGCLP35914 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
HMGCLP35914 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HMGCLP35914 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
HMGCLP35914 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
HMGCLP35914 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
HMGCLP35914 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HMGCLP35914 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
HMGCLP35914 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HMGCLP35914 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
HMGCLP35914 AC020656.2-201ENST00000613291 5309 ntBASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms