Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CNGA1P29973 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC7.23□□□□□ -1.25
CNGA1P29973 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC7.23□□□□□ -1.25
CNGA1P29973 AC087752.1-201ENST00000391360 558 ntBASIC7.23□□□□□ -1.25
CNGA1P29973 AL391422.1-201ENST00000402155 436 ntBASIC7.23□□□□□ -1.25
CNGA1P29973 RNA5SP178-201ENST00000410380 128 ntBASIC7.23□□□□□ -1.25
CNGA1P29973 BTF3P9-201ENST00000418784 283 ntBASIC7.23□□□□□ -1.25
CNGA1P29973 AL157884.1-201ENST00000424561 454 ntBASIC7.23□□□□□ -1.25
CNGA1P29973 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC7.23□□□□□ -1.25
CNGA1P29973 ATP6V1E1P1-201ENST00000439215 681 ntBASIC7.23□□□□□ -1.25
CNGA1P29973 RNFT1P2-201ENST00000443064 757 ntBASIC7.23□□□□□ -1.25
CNGA1P29973 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC7.23□□□□□ -1.25
CNGA1P29973 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC7.23□□□□□ -1.25
CNGA1P29973 RPL23AP23-201ENST00000452590 471 ntBASIC7.23□□□□□ -1.25
CNGA1P29973 AL133351.3-201ENST00000454998 193 ntBASIC7.23□□□□□ -1.25
CNGA1P29973 MTATP6P14-201ENST00000455189 673 ntBASIC7.23□□□□□ -1.25
CNGA1P29973 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC7.23□□□□□ -1.25
CNGA1P29973 OR2A1-AS1-202ENST00000467944 422 ntBASIC7.23□□□□□ -1.25
CNGA1P29973 AC007998.1-201ENST00000474156 672 ntBASIC7.23□□□□□ -1.25
CNGA1P29973 RN7SL369P-201ENST00000477138 299 ntBASIC7.23□□□□□ -1.25
CNGA1P29973 RPL12P31-201ENST00000478433 450 ntBASIC7.23□□□□□ -1.25
CNGA1P29973 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC7.23□□□□□ -1.25
CNGA1P29973 AC021146.7-201ENST00000509604 775 ntBASIC7.23□□□□□ -1.25
CNGA1P29973 TPT1P8-201ENST00000510120 555 ntBASIC7.23□□□□□ -1.25
CNGA1P29973 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC7.23□□□□□ -1.25
CNGA1P29973 RNA5SP271-201ENST00000516700 88 ntBASIC7.23□□□□□ -1.25
CNGA1P29973 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC7.23□□□□□ -1.25
CNGA1P29973 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC7.23□□□□□ -1.25
CNGA1P29973 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC7.23□□□□□ -1.25
CNGA1P29973 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC7.23□□□□□ -1.25
CNGA1P29973 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC7.23□□□□□ -1.25
CNGA1P29973 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC7.23□□□□□ -1.25
CNGA1P29973 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC7.23□□□□□ -1.25
CNGA1P29973 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC7.23□□□□□ -1.25
CNGA1P29973 AC027243.2-201ENST00000602530 724 ntBASIC7.23□□□□□ -1.25
CNGA1P29973 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC7.23□□□□□ -1.25
CNGA1P29973 AL445647.2-201ENST00000615170 130 ntBASIC7.23□□□□□ -1.25
CNGA1P29973 RFPL4AP6-201ENST00000616792 846 ntBASIC7.23□□□□□ -1.25
CNGA1P29973 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC7.23□□□□□ -1.25
CNGA1P29973 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
CNGA1P29973 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC7.23□□□□□ -1.25
CNGA1P29973 AC125238.2-201ENST00000430003 1440 ntBASIC7.23□□□□□ -1.25
CNGA1P29973 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CNGA1P29973 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC7.23□□□□□ -1.25
CNGA1P29973 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
CNGA1P29973 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CNGA1P29973 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
CNGA1P29973 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CNGA1P29973 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CNGA1P29973 CREM-203ENST00000344351 1625 ntTSL 2 BASIC7.23□□□□□ -1.25
CNGA1P29973 SAGE3P-201ENST00000619800 1635 ntBASIC7.23□□□□□ -1.25
CNGA1P29973 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CNGA1P29973 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
CNGA1P29973 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CNGA1P29973 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CNGA1P29973 AL359715.3-201ENST00000569267 2123 ntBASIC7.22□□□□□ -1.25
CNGA1P29973 AL355377.1-201ENST00000621125 1653 ntBASIC7.22□□□□□ -1.25
CNGA1P29973 AC018717.1-201ENST00000457712 1505 ntBASIC7.22□□□□□ -1.25
CNGA1P29973 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC7.22□□□□□ -1.25
CNGA1P29973 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CNGA1P29973 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC7.22□□□□□ -1.25
CNGA1P29973 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC7.22□□□□□ -1.25
CNGA1P29973 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC7.22□□□□□ -1.25
CNGA1P29973 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
CNGA1P29973 AC005261.2-201ENST00000593427 4258 ntBASIC7.22□□□□□ -1.25
CNGA1P29973 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC7.22□□□□□ -1.25
CNGA1P29973 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
CNGA1P29973 SNORD16-201ENST00000362803 99 ntBASIC7.22□□□□□ -1.25
CNGA1P29973 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.25
CNGA1P29973 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CNGA1P29973 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
CNGA1P29973 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC7.22□□□□□ -1.25
CNGA1P29973 NENFP1-201ENST00000419476 466 ntBASIC7.22□□□□□ -1.25
CNGA1P29973 AL606495.1-201ENST00000422100 813 ntBASIC7.22□□□□□ -1.25
CNGA1P29973 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC7.22□□□□□ -1.25
CNGA1P29973 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC7.22□□□□□ -1.25
CNGA1P29973 SOCS5P1-201ENST00000440415 949 ntBASIC7.22□□□□□ -1.25
CNGA1P29973 SNRPFP2-201ENST00000440710 251 ntBASIC7.22□□□□□ -1.25
CNGA1P29973 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC7.22□□□□□ -1.25
CNGA1P29973 RN7SL643P-201ENST00000471845 291 ntBASIC7.22□□□□□ -1.25
CNGA1P29973 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC7.22□□□□□ -1.25
CNGA1P29973 MTCO3P27-201ENST00000514397 196 ntBASIC7.22□□□□□ -1.25
CNGA1P29973 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC7.22□□□□□ -1.25
CNGA1P29973 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC7.22□□□□□ -1.25
CNGA1P29973 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC7.22□□□□□ -1.25
CNGA1P29973 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC7.22□□□□□ -1.25
CNGA1P29973 MIR5095-201ENST00000578844 88 ntBASIC7.22□□□□□ -1.25
CNGA1P29973 AF230666.2-201ENST00000602328 725 ntBASIC7.22□□□□□ -1.25
CNGA1P29973 BUB1P1-201ENST00000603541 607 ntBASIC7.22□□□□□ -1.25
CNGA1P29973 AL683813.2-201ENST00000605245 502 ntBASIC7.22□□□□□ -1.25
CNGA1P29973 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC7.22□□□□□ -1.25
CNGA1P29973 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC7.22□□□□□ -1.25
CNGA1P29973 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC7.22□□□□□ -1.25
CNGA1P29973 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CNGA1P29973 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC7.22□□□□□ -1.25
CNGA1P29973 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC7.22□□□□□ -1.25
CNGA1P29973 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CNGA1P29973 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CNGA1P29973 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CNGA1P29973 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC7.22□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms