Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SHC1P29353 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
SHC1P29353 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SHC1P29353 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SHC1P29353 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SHC1P29353 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SHC1P29353 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
SHC1P29353 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
SHC1P29353 AC130304.1-201ENST00000622942 2385 ntBASIC5.32□□□□□ -1.56
SHC1P29353 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
SHC1P29353 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
SHC1P29353 OR7E25P-201ENST00000344844 931 ntBASIC5.32□□□□□ -1.56
SHC1P29353 RNU1-150P-201ENST00000362491 162 ntBASIC5.32□□□□□ -1.56
SHC1P29353 RN7SKP128-201ENST00000364270 303 ntBASIC5.32□□□□□ -1.56
SHC1P29353 RNA5SP500-201ENST00000364486 119 ntBASIC5.32□□□□□ -1.56
SHC1P29353 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.32□□□□□ -1.56
SHC1P29353 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC5.32□□□□□ -1.56
SHC1P29353 KCTD9P1-201ENST00000430462 1167 ntBASIC5.32□□□□□ -1.56
SHC1P29353 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC5.32□□□□□ -1.56
SHC1P29353 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.32□□□□□ -1.56
SHC1P29353 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.32□□□□□ -1.56
SHC1P29353 EIF5AP4-201ENST00000441206 465 ntBASIC5.32□□□□□ -1.56
SHC1P29353 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.32□□□□□ -1.56
SHC1P29353 AL157777.1-201ENST00000468100 304 ntBASIC5.32□□□□□ -1.56
SHC1P29353 SETP21-201ENST00000514799 892 ntBASIC5.32□□□□□ -1.56
SHC1P29353 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.32□□□□□ -1.56
SHC1P29353 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.32□□□□□ -1.56
SHC1P29353 AC060775.1-201ENST00000518241 520 ntBASIC5.32□□□□□ -1.56
SHC1P29353 WBP1LP3-201ENST00000523033 208 ntBASIC5.32□□□□□ -1.56
SHC1P29353 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.32□□□□□ -1.56
SHC1P29353 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC5.32□□□□□ -1.56
SHC1P29353 NANOGNBP2-201ENST00000544753 553 ntBASIC5.32□□□□□ -1.56
SHC1P29353 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.32□□□□□ -1.56
SHC1P29353 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.32□□□□□ -1.56
SHC1P29353 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.32□□□□□ -1.56
SHC1P29353 RPL12P48-201ENST00000605620 304 ntBASIC5.32□□□□□ -1.56
SHC1P29353 AL136131.3-201ENST00000607600 188 ntBASIC5.32□□□□□ -1.56
SHC1P29353 RNA5SP439-201ENST00000617595 124 ntBASIC5.32□□□□□ -1.56
SHC1P29353 MIR6778-201ENST00000617912 73 ntBASIC5.32□□□□□ -1.56
SHC1P29353 AC091305.2-201ENST00000624049 1576 ntBASIC5.32□□□□□ -1.56
SHC1P29353 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SHC1P29353 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
SHC1P29353 AP005435.3-201ENST00000531260 3198 ntBASIC5.32□□□□□ -1.56
SHC1P29353 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SHC1P29353 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
SHC1P29353 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SHC1P29353 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SHC1P29353 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SHC1P29353 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.31□□□□□ -1.56
SHC1P29353 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SHC1P29353 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SHC1P29353 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
SHC1P29353 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.31□□□□□ -1.56
SHC1P29353 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
SHC1P29353 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
SHC1P29353 AC016745.2-201ENST00000608834 3443 ntBASIC5.31□□□□□ -1.56
SHC1P29353 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.31□□□□□ -1.56
SHC1P29353 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SHC1P29353 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
SHC1P29353 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
SHC1P29353 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
SHC1P29353 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
SHC1P29353 RNU6-316P-201ENST00000391027 107 ntBASIC5.31□□□□□ -1.56
SHC1P29353 METTL15P3-201ENST00000415522 1221 ntBASIC5.31□□□□□ -1.56
SHC1P29353 AC002069.1-201ENST00000429649 1159 ntBASIC5.31□□□□□ -1.56
SHC1P29353 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
SHC1P29353 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.31□□□□□ -1.56
SHC1P29353 AL603882.1-201ENST00000463059 681 ntBASIC5.31□□□□□ -1.56
SHC1P29353 PFN1P6-201ENST00000476786 399 ntBASIC5.31□□□□□ -1.56
SHC1P29353 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.31□□□□□ -1.56
SHC1P29353 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC5.31□□□□□ -1.56
SHC1P29353 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.31□□□□□ -1.56
SHC1P29353 PCNAP4-201ENST00000532690 730 ntBASIC5.31□□□□□ -1.56
SHC1P29353 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.31□□□□□ -1.56
SHC1P29353 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.31□□□□□ -1.56
SHC1P29353 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.31□□□□□ -1.56
SHC1P29353 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.31□□□□□ -1.56
SHC1P29353 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC5.31□□□□□ -1.56
SHC1P29353 SNX18P12-201ENST00000624821 759 ntBASIC5.31□□□□□ -1.56
SHC1P29353 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC5.31□□□□□ -1.56
SHC1P29353 AC129915.3-201ENST00000634128 948 ntBASIC5.31□□□□□ -1.56
SHC1P29353 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SHC1P29353 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SHC1P29353 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SHC1P29353 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SHC1P29353 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
SHC1P29353 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
SHC1P29353 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
SHC1P29353 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SHC1P29353 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
SHC1P29353 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.3□□□□□ -1.56
SHC1P29353 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SHC1P29353 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SHC1P29353 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SHC1P29353 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.3□□□□□ -1.56
SHC1P29353 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SHC1P29353 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SHC1P29353 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SHC1P29353 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SHC1P29353 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 129.8 ms