Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AL096829.1-201ENST00000413677 457 ntBASIC5.88□□□□□ -1.47
CDH3P22223 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC5.88□□□□□ -1.47
CDH3P22223 RPL12P16-201ENST00000431098 498 ntBASIC5.88□□□□□ -1.47
CDH3P22223 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.88□□□□□ -1.47
CDH3P22223 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC5.88□□□□□ -1.47
CDH3P22223 TRIM60P16-201ENST00000444048 694 ntBASIC5.88□□□□□ -1.47
CDH3P22223 AL022237.1-201ENST00000446663 358 ntBASIC5.88□□□□□ -1.47
CDH3P22223 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC5.88□□□□□ -1.47
CDH3P22223 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.88□□□□□ -1.47
CDH3P22223 RN7SL221P-201ENST00000466190 281 ntBASIC5.88□□□□□ -1.47
CDH3P22223 AC025458.1-201ENST00000506046 166 ntBASIC5.88□□□□□ -1.47
CDH3P22223 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC5.88□□□□□ -1.47
CDH3P22223 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.88□□□□□ -1.47
CDH3P22223 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC5.88□□□□□ -1.47
CDH3P22223 RNA5SP340-201ENST00000517132 107 ntBASIC5.88□□□□□ -1.47
CDH3P22223 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CDH3P22223 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC5.88□□□□□ -1.47
CDH3P22223 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC5.88□□□□□ -1.47
CDH3P22223 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.88□□□□□ -1.47
CDH3P22223 RPA2P1-201ENST00000556557 721 ntBASIC5.88□□□□□ -1.47
CDH3P22223 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.88□□□□□ -1.47
CDH3P22223 AC019322.1-201ENST00000571869 389 ntBASIC5.88□□□□□ -1.47
CDH3P22223 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.88□□□□□ -1.47
CDH3P22223 AC010615.3-201ENST00000597319 394 ntBASIC5.88□□□□□ -1.47
CDH3P22223 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
CDH3P22223 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.88□□□□□ -1.47
CDH3P22223 AC141002.1-201ENST00000607025 279 ntBASIC5.88□□□□□ -1.47
CDH3P22223 AL021368.3-201ENST00000607119 578 ntBASIC5.88□□□□□ -1.47
CDH3P22223 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.88□□□□□ -1.47
CDH3P22223 AC024884.1-201ENST00000620583 399 ntBASIC5.88□□□□□ -1.47
CDH3P22223 AC129778.1-202ENST00000623812 261 ntBASIC5.88□□□□□ -1.47
CDH3P22223 AC003992.1-201ENST00000635364 557 ntBASIC5.88□□□□□ -1.47
CDH3P22223 AL591379.1-207ENST00000635982 261 ntBASIC5.88□□□□□ -1.47
CDH3P22223 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.88□□□□□ -1.47
CDH3P22223 AC116667.2-201ENST00000641075 823 ntBASIC5.88□□□□□ -1.47
CDH3P22223 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
CDH3P22223 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
CDH3P22223 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CDH3P22223 HDAC1P2-201ENST00000453661 1398 ntBASIC5.88□□□□□ -1.47
CDH3P22223 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.88□□□□□ -1.47
CDH3P22223 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CDH3P22223 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
CDH3P22223 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.88□□□□□ -1.47
CDH3P22223 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.88□□□□□ -1.47
CDH3P22223 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
CDH3P22223 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
CDH3P22223 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
CDH3P22223 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.88□□□□□ -1.47
CDH3P22223 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CDH3P22223 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.88□□□□□ -1.47
CDH3P22223 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
CDH3P22223 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.88□□□□□ -1.47
CDH3P22223 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.87□□□□□ -1.47
CDH3P22223 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.87□□□□□ -1.47
CDH3P22223 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
CDH3P22223 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CDH3P22223 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CDH3P22223 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CDH3P22223 AL121768.1-201ENST00000613917 2544 ntBASIC5.87□□□□□ -1.47
CDH3P22223 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
CDH3P22223 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
CDH3P22223 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
CDH3P22223 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
CDH3P22223 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CDH3P22223 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
CDH3P22223 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.87□□□□□ -1.47
CDH3P22223 AC079807.1-201ENST00000429993 481 ntBASIC5.87□□□□□ -1.47
CDH3P22223 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC5.87□□□□□ -1.47
CDH3P22223 CFL1P4-201ENST00000451536 498 ntBASIC5.87□□□□□ -1.47
CDH3P22223 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC5.87□□□□□ -1.47
CDH3P22223 AC103563.5-201ENST00000455643 364 ntBASIC5.87□□□□□ -1.47
CDH3P22223 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CDH3P22223 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.87□□□□□ -1.47
CDH3P22223 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.87□□□□□ -1.47
CDH3P22223 OR56A7P-201ENST00000524865 941 ntBASIC5.87□□□□□ -1.47
CDH3P22223 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CDH3P22223 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC5.87□□□□□ -1.47
CDH3P22223 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.87□□□□□ -1.47
CDH3P22223 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.87□□□□□ -1.47
CDH3P22223 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.87□□□□□ -1.47
CDH3P22223 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.87□□□□□ -1.47
CDH3P22223 AC015982.1-201ENST00000608113 465 ntBASIC5.87□□□□□ -1.47
CDH3P22223 AL365181.4-201ENST00000609800 547 ntBASIC5.87□□□□□ -1.47
CDH3P22223 AL096712.1-201ENST00000614561 159 ntBASIC5.87□□□□□ -1.47
CDH3P22223 AC096708.4-201ENST00000620563 552 ntBASIC5.87□□□□□ -1.47
CDH3P22223 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CDH3P22223 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC5.87□□□□□ -1.47
CDH3P22223 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC5.87□□□□□ -1.47
CDH3P22223 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.87□□□□□ -1.47
CDH3P22223 CCNT2P1-201ENST00000423082 1315 ntBASIC5.87□□□□□ -1.47
CDH3P22223 AC233968.1-201ENST00000611212 1300 ntBASIC5.87□□□□□ -1.47
CDH3P22223 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
CDH3P22223 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
CDH3P22223 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
CDH3P22223 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.87□□□□□ -1.47
CDH3P22223 AC093909.5-201ENST00000621839 1799 ntBASIC5.87□□□□□ -1.47
CDH3P22223 ADAM24P-201ENST00000398655 2101 ntBASIC5.87□□□□□ -1.47
CDH3P22223 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.87□□□□□ -1.47
CDH3P22223 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
CDH3P22223 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 141.2 ms