Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 NIFKP3-201ENST00000417799 865 ntBASIC5.49□□□□□ -1.53
COL5A1P20908 SRSF1P1-201ENST00000424058 520 ntBASIC5.49□□□□□ -1.53
COL5A1P20908 OR6D1P-201ENST00000436165 939 ntBASIC5.49□□□□□ -1.53
COL5A1P20908 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC5.49□□□□□ -1.53
COL5A1P20908 AC092106.1-201ENST00000444291 373 ntBASIC5.49□□□□□ -1.53
COL5A1P20908 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.49□□□□□ -1.53
COL5A1P20908 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.49□□□□□ -1.53
COL5A1P20908 AC147055.3-201ENST00000510547 851 ntBASIC5.49□□□□□ -1.53
COL5A1P20908 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.49□□□□□ -1.53
COL5A1P20908 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.49□□□□□ -1.53
COL5A1P20908 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.49□□□□□ -1.53
COL5A1P20908 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.49□□□□□ -1.53
COL5A1P20908 RPL10P14-201ENST00000565265 298 ntBASIC5.49□□□□□ -1.53
COL5A1P20908 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.49□□□□□ -1.53
COL5A1P20908 AC000068.2-201ENST00000608816 460 ntBASIC5.49□□□□□ -1.53
COL5A1P20908 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.49□□□□□ -1.53
COL5A1P20908 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC5.49□□□□□ -1.53
COL5A1P20908 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.49□□□□□ -1.53
COL5A1P20908 SAMMSON-209ENST00000641222 1100 ntBASIC5.49□□□□□ -1.53
COL5A1P20908 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
COL5A1P20908 KIAA0100-201ENST00000389003 6852 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
COL5A1P20908 KIAA0100-203ENST00000544884 6856 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
COL5A1P20908 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC5.49□□□□□ -1.53
COL5A1P20908 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
COL5A1P20908 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
COL5A1P20908 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
COL5A1P20908 IMMTP1-201ENST00000435590 2219 ntBASIC5.49□□□□□ -1.53
COL5A1P20908 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
COL5A1P20908 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
COL5A1P20908 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
COL5A1P20908 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC5.49□□□□□ -1.53
COL5A1P20908 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
COL5A1P20908 Z95114.1-201ENST00000624264 14574 ntBASIC5.49□□□□□ -1.53
COL5A1P20908 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC5.49□□□□□ -1.53
COL5A1P20908 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
COL5A1P20908 AC079753.1-201ENST00000623243 3868 ntBASIC5.48□□□□□ -1.53
COL5A1P20908 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
COL5A1P20908 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
COL5A1P20908 COX7B2-202ENST00000396533 617 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
COL5A1P20908 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.48□□□□□ -1.53
COL5A1P20908 LDHAP2-201ENST00000437325 985 ntBASIC5.48□□□□□ -1.53
COL5A1P20908 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.48□□□□□ -1.53
COL5A1P20908 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
COL5A1P20908 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.48□□□□□ -1.53
COL5A1P20908 RBM22P1-201ENST00000578589 1214 ntBASIC5.48□□□□□ -1.53
COL5A1P20908 AC104785.1-201ENST00000603220 588 ntBASIC5.48□□□□□ -1.53
COL5A1P20908 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.48□□□□□ -1.53
COL5A1P20908 AC025574.2-201ENST00000615621 514 ntBASIC5.48□□□□□ -1.53
COL5A1P20908 AL445528.2-201ENST00000620582 470 ntBASIC5.48□□□□□ -1.53
COL5A1P20908 VANGL1-202ENST00000355485 8691 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
COL5A1P20908 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
COL5A1P20908 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
COL5A1P20908 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
COL5A1P20908 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
COL5A1P20908 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
COL5A1P20908 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC5.48□□□□□ -1.53
COL5A1P20908 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
COL5A1P20908 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
COL5A1P20908 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.48□□□□□ -1.53
COL5A1P20908 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
COL5A1P20908 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.48□□□□□ -1.53
COL5A1P20908 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.48□□□□□ -1.53
COL5A1P20908 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.48□□□□□ -1.53
COL5A1P20908 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
COL5A1P20908 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.48□□□□□ -1.53
COL5A1P20908 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.48□□□□□ -1.53
COL5A1P20908 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
COL5A1P20908 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC5.48□□□□□ -1.53
COL5A1P20908 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
COL5A1P20908 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
COL5A1P20908 MIR133B-201ENST00000362210 119 ntBASIC5.48□□□□□ -1.53
COL5A1P20908 RNA5SP319-201ENST00000362768 119 ntBASIC5.48□□□□□ -1.53
COL5A1P20908 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
COL5A1P20908 AL109941.1-201ENST00000401925 229 ntBASIC5.48□□□□□ -1.53
COL5A1P20908 RMRPP5-201ENST00000411156 267 ntBASIC5.48□□□□□ -1.53
COL5A1P20908 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.48□□□□□ -1.53
COL5A1P20908 VN1R54P-201ENST00000435210 1049 ntBASIC5.48□□□□□ -1.53
COL5A1P20908 RPL15P21-201ENST00000495592 567 ntBASIC5.48□□□□□ -1.53
COL5A1P20908 AC090638.1-201ENST00000498296 909 ntBASIC5.48□□□□□ -1.53
COL5A1P20908 PGAM1P13-201ENST00000507497 754 ntBASIC5.48□□□□□ -1.53
COL5A1P20908 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.48□□□□□ -1.53
COL5A1P20908 AC110775.1-201ENST00000513721 462 ntBASIC5.48□□□□□ -1.53
COL5A1P20908 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC5.48□□□□□ -1.53
COL5A1P20908 TPM3P3-201ENST00000521343 354 ntBASIC5.48□□□□□ -1.53
COL5A1P20908 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC5.48□□□□□ -1.53
COL5A1P20908 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.48□□□□□ -1.53
COL5A1P20908 AC009962.1-201ENST00000567327 3813 ntBASIC5.48□□□□□ -1.53
COL5A1P20908 AL163952.1-202ENST00000569625 600 ntBASIC5.48□□□□□ -1.53
COL5A1P20908 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.48□□□□□ -1.53
COL5A1P20908 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.48□□□□□ -1.53
COL5A1P20908 PCNX1-201ENST00000304743 12919 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
COL5A1P20908 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
COL5A1P20908 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
COL5A1P20908 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
COL5A1P20908 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.48□□□□□ -1.53
COL5A1P20908 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
COL5A1P20908 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.47□□□□□ -1.53
COL5A1P20908 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
COL5A1P20908 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
COL5A1P20908 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms