Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AL354890.1-201ENST00000413730 346 ntBASIC5.81□□□□□ -1.48
XRCC1P18887 AC073109.1-201ENST00000445066 978 ntBASIC5.81□□□□□ -1.48
XRCC1P18887 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.81□□□□□ -1.48
XRCC1P18887 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.81□□□□□ -1.48
XRCC1P18887 AP006222.1-205ENST00000450734 457 ntBASIC5.81□□□□□ -1.48
XRCC1P18887 AC104164.1-201ENST00000460282 590 ntBASIC5.81□□□□□ -1.48
XRCC1P18887 AC008629.2-201ENST00000503783 483 ntBASIC5.81□□□□□ -1.48
XRCC1P18887 AC114781.3-201ENST00000512083 142 ntBASIC5.81□□□□□ -1.48
XRCC1P18887 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC5.81□□□□□ -1.48
XRCC1P18887 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.81□□□□□ -1.48
XRCC1P18887 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.81□□□□□ -1.48
XRCC1P18887 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC5.81□□□□□ -1.48
XRCC1P18887 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.81□□□□□ -1.48
XRCC1P18887 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.81□□□□□ -1.48
XRCC1P18887 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.81□□□□□ -1.48
XRCC1P18887 AC023389.2-201ENST00000580031 955 ntBASIC5.81□□□□□ -1.48
XRCC1P18887 MIR3614-201ENST00000581261 86 ntBASIC5.81□□□□□ -1.48
XRCC1P18887 AC060780.2-201ENST00000589047 198 ntBASIC5.81□□□□□ -1.48
XRCC1P18887 COX6CP7-201ENST00000597056 208 ntBASIC5.81□□□□□ -1.48
XRCC1P18887 AC027243.2-201ENST00000602530 724 ntBASIC5.81□□□□□ -1.48
XRCC1P18887 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC5.81□□□□□ -1.48
XRCC1P18887 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.81□□□□□ -1.48
XRCC1P18887 AL021918.2-201ENST00000613415 194 ntBASIC5.81□□□□□ -1.48
XRCC1P18887 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.81□□□□□ -1.48
XRCC1P18887 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.81□□□□□ -1.48
XRCC1P18887 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
XRCC1P18887 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
XRCC1P18887 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
XRCC1P18887 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.81□□□□□ -1.48
XRCC1P18887 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.81□□□□□ -1.48
XRCC1P18887 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.81□□□□□ -1.48
XRCC1P18887 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
XRCC1P18887 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
XRCC1P18887 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
XRCC1P18887 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
XRCC1P18887 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
XRCC1P18887 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.81□□□□□ -1.48
XRCC1P18887 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
XRCC1P18887 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.8□□□□□ -1.48
XRCC1P18887 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
XRCC1P18887 ADAM24P-201ENST00000398655 2101 ntBASIC5.8□□□□□ -1.48
XRCC1P18887 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
XRCC1P18887 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
XRCC1P18887 GTF2IP4-201ENST00000453092 2054 ntBASIC5.8□□□□□ -1.48
XRCC1P18887 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
XRCC1P18887 OR52B3P-201ENST00000314715 928 ntBASIC5.8□□□□□ -1.48
XRCC1P18887 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
XRCC1P18887 RNA5SP510-201ENST00000364697 99 ntBASIC5.8□□□□□ -1.48
XRCC1P18887 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
XRCC1P18887 RNA5SP122-201ENST00000384457 108 ntBASIC5.8□□□□□ -1.48
XRCC1P18887 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
XRCC1P18887 AL354766.1-201ENST00000423396 542 ntBASIC5.8□□□□□ -1.48
XRCC1P18887 MRPS21P2-201ENST00000424704 264 ntBASIC5.8□□□□□ -1.48
XRCC1P18887 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.8□□□□□ -1.48
XRCC1P18887 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.8□□□□□ -1.48
XRCC1P18887 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
XRCC1P18887 AL445928.1-201ENST00000435545 222 ntBASIC5.8□□□□□ -1.48
XRCC1P18887 PCBP2P1-201ENST00000437262 977 ntBASIC5.8□□□□□ -1.48
XRCC1P18887 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.8□□□□□ -1.48
XRCC1P18887 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.8□□□□□ -1.48
XRCC1P18887 RPS7P3-201ENST00000443360 580 ntBASIC5.8□□□□□ -1.48
XRCC1P18887 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.8□□□□□ -1.48
XRCC1P18887 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.8□□□□□ -1.48
XRCC1P18887 SDC4P-201ENST00000453285 601 ntBASIC5.8□□□□□ -1.48
XRCC1P18887 AC108751.3-201ENST00000461814 1020 ntBASIC5.8□□□□□ -1.48
XRCC1P18887 AC007998.1-201ENST00000474156 672 ntBASIC5.8□□□□□ -1.48
XRCC1P18887 PSMA2P2-201ENST00000504319 686 ntBASIC5.8□□□□□ -1.48
XRCC1P18887 AC111000.5-201ENST00000506559 1178 ntBASIC5.8□□□□□ -1.48
XRCC1P18887 SNORD46.2-201ENST00000516021 102 ntBASIC5.8□□□□□ -1.48
XRCC1P18887 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.8□□□□□ -1.48
XRCC1P18887 IGKV2-4-201ENST00000523070 340 ntBASIC5.8□□□□□ -1.48
XRCC1P18887 OR4A42P-201ENST00000531397 938 ntBASIC5.8□□□□□ -1.48
XRCC1P18887 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.8□□□□□ -1.48
XRCC1P18887 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.8□□□□□ -1.48
XRCC1P18887 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.8□□□□□ -1.48
XRCC1P18887 ZNF322P1-201ENST00000568013 1209 ntBASIC5.8□□□□□ -1.48
XRCC1P18887 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.8□□□□□ -1.48
XRCC1P18887 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.8□□□□□ -1.48
XRCC1P18887 AC125494.2-201ENST00000602431 657 ntBASIC5.8□□□□□ -1.48
XRCC1P18887 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.8□□□□□ -1.48
XRCC1P18887 RPL12P48-201ENST00000605620 304 ntBASIC5.8□□□□□ -1.48
XRCC1P18887 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC5.8□□□□□ -1.48
XRCC1P18887 AC026124.2-201ENST00000621847 656 ntBASIC5.8□□□□□ -1.48
XRCC1P18887 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
XRCC1P18887 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.8□□□□□ -1.48
XRCC1P18887 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
XRCC1P18887 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
XRCC1P18887 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
XRCC1P18887 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
XRCC1P18887 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
XRCC1P18887 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
XRCC1P18887 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
XRCC1P18887 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
XRCC1P18887 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
XRCC1P18887 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.8□□□□□ -1.48
XRCC1P18887 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
XRCC1P18887 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
XRCC1P18887 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.8□□□□□ -1.48
XRCC1P18887 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
XRCC1P18887 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms