Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
TOP1P11387 RN7SL273P-201ENST00000481561 299 ntBASIC6.81□□□□□ -1.32
TOP1P11387 PPP1R11P1-201ENST00000486095 376 ntBASIC6.81□□□□□ -1.32
TOP1P11387 AC104109.1-201ENST00000498563 436 ntBASIC6.81□□□□□ -1.32
TOP1P11387 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC6.81□□□□□ -1.32
TOP1P11387 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.81□□□□□ -1.32
TOP1P11387 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.81□□□□□ -1.32
TOP1P11387 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC6.81□□□□□ -1.32
TOP1P11387 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
TOP1P11387 OOSP1P2-201ENST00000579644 351 ntBASIC6.81□□□□□ -1.32
TOP1P11387 MIR4260-201ENST00000583107 67 ntBASIC6.81□□□□□ -1.32
TOP1P11387 AL034374.2-201ENST00000605281 548 ntBASIC6.81□□□□□ -1.32
TOP1P11387 RN7SL544P-201ENST00000617232 284 ntBASIC6.81□□□□□ -1.32
TOP1P11387 RN7SL763P-201ENST00000620922 284 ntBASIC6.81□□□□□ -1.32
TOP1P11387 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.81□□□□□ -1.32
TOP1P11387 SNORA17.5-201ENST00000630429 132 ntBASIC6.81□□□□□ -1.32
TOP1P11387 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC6.81□□□□□ -1.32
TOP1P11387 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
TOP1P11387 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6.81□□□□□ -1.32
TOP1P11387 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.81□□□□□ -1.32
TOP1P11387 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
TOP1P11387 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.81□□□□□ -1.32
TOP1P11387 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
TOP1P11387 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC6.81□□□□□ -1.32
TOP1P11387 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
TOP1P11387 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
TOP1P11387 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
TOP1P11387 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
TOP1P11387 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
TOP1P11387 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC6.8□□□□□ -1.32
TOP1P11387 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
TOP1P11387 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
TOP1P11387 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
TOP1P11387 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
TOP1P11387 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.8□□□□□ -1.32
TOP1P11387 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
TOP1P11387 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC6.8□□□□□ -1.32
TOP1P11387 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC6.8□□□□□ -1.32
TOP1P11387 AC019205.1-201ENST00000421830 730 ntBASIC6.8□□□□□ -1.32
TOP1P11387 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
TOP1P11387 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.8□□□□□ -1.32
TOP1P11387 RPS3AP38-201ENST00000435889 763 ntBASIC6.8□□□□□ -1.32
TOP1P11387 AC015983.1-201ENST00000441577 373 ntBASIC6.8□□□□□ -1.32
TOP1P11387 AC064862.4-201ENST00000442180 334 ntBASIC6.8□□□□□ -1.32
TOP1P11387 RPL36AP39-201ENST00000445859 318 ntBASIC6.8□□□□□ -1.32
TOP1P11387 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC6.8□□□□□ -1.32
TOP1P11387 CYCSP22-201ENST00000517555 339 ntBASIC6.8□□□□□ -1.32
TOP1P11387 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC6.8□□□□□ -1.32
TOP1P11387 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC6.8□□□□□ -1.32
TOP1P11387 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC6.8□□□□□ -1.32
TOP1P11387 NPM1P42-201ENST00000560329 862 ntBASIC6.8□□□□□ -1.32
TOP1P11387 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.8□□□□□ -1.32
TOP1P11387 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.8□□□□□ -1.32
TOP1P11387 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC6.8□□□□□ -1.32
TOP1P11387 AC126175.1-201ENST00000617041 758 ntBASIC6.8□□□□□ -1.32
TOP1P11387 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC6.8□□□□□ -1.32
TOP1P11387 MAPK10-350ENST00000641777 965 ntBASIC6.8□□□□□ -1.32
TOP1P11387 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
TOP1P11387 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
TOP1P11387 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
TOP1P11387 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.8□□□□□ -1.32
TOP1P11387 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.79□□□□□ -1.32
TOP1P11387 AC005224.3-201ENST00000584683 2140 ntBASIC6.79□□□□□ -1.32
TOP1P11387 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
TOP1P11387 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
TOP1P11387 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.79□□□□□ -1.32
TOP1P11387 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
TOP1P11387 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
TOP1P11387 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
TOP1P11387 RNA5SP394-201ENST00000364216 119 ntBASIC6.79□□□□□ -1.32
TOP1P11387 RN7SKP69-201ENST00000365390 305 ntBASIC6.79□□□□□ -1.32
TOP1P11387 HMGB1P20-201ENST00000402555 677 ntBASIC6.79□□□□□ -1.32
TOP1P11387 AL357752.1-201ENST00000412817 349 ntBASIC6.79□□□□□ -1.32
TOP1P11387 AC017078.1-201ENST00000416146 368 ntBASIC6.79□□□□□ -1.32
TOP1P11387 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
TOP1P11387 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
TOP1P11387 AC096775.1-201ENST00000437724 448 ntBASIC6.79□□□□□ -1.32
TOP1P11387 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.79□□□□□ -1.32
TOP1P11387 RNU1-88P-201ENST00000459274 128 ntBASIC6.79□□□□□ -1.32
TOP1P11387 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC6.79□□□□□ -1.32
TOP1P11387 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.79□□□□□ -1.32
TOP1P11387 TRBV5-2-201ENST00000489095 273 ntBASIC6.79□□□□□ -1.32
TOP1P11387 TOMM22P4-201ENST00000511318 336 ntBASIC6.79□□□□□ -1.32
TOP1P11387 SCARNA6.1-201ENST00000516989 238 ntBASIC6.79□□□□□ -1.32
TOP1P11387 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC6.79□□□□□ -1.32
TOP1P11387 AC090424.1-201ENST00000535243 736 ntBASIC6.79□□□□□ -1.32
TOP1P11387 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC6.79□□□□□ -1.32
TOP1P11387 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC6.79□□□□□ -1.32
TOP1P11387 AC012146.2-201ENST00000576545 416 ntBASIC6.79□□□□□ -1.32
TOP1P11387 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.79□□□□□ -1.32
TOP1P11387 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC6.79□□□□□ -1.32
TOP1P11387 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC6.79□□□□□ -1.32
TOP1P11387 REV3L-214ENST00000619481 969 ntTSL 5 BASIC6.79□□□□□ -1.32
TOP1P11387 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.79□□□□□ -1.32
TOP1P11387 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
TOP1P11387 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC6.79□□□□□ -1.32
TOP1P11387 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
TOP1P11387 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
TOP1P11387 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
TOP1P11387 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms