Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.12□□□□□ -1.59
UBCP0CG48 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC5.12□□□□□ -1.59
UBCP0CG48 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.12□□□□□ -1.59
UBCP0CG48 AL359219.2-201ENST00000555184 348 ntBASIC5.12□□□□□ -1.59
UBCP0CG48 HMGN1P26-201ENST00000558737 303 ntBASIC5.12□□□□□ -1.59
UBCP0CG48 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC5.12□□□□□ -1.59
UBCP0CG48 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
UBCP0CG48 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.12□□□□□ -1.59
UBCP0CG48 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC5.12□□□□□ -1.59
UBCP0CG48 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.12□□□□□ -1.59
UBCP0CG48 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC5.12□□□□□ -1.59
UBCP0CG48 AC073389.3-201ENST00000609434 935 ntBASIC5.12□□□□□ -1.59
UBCP0CG48 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC5.12□□□□□ -1.59
UBCP0CG48 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
UBCP0CG48 FAM27E2-201ENST00000619668 403 ntBASIC5.12□□□□□ -1.59
UBCP0CG48 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
UBCP0CG48 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.12□□□□□ -1.59
UBCP0CG48 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
UBCP0CG48 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
UBCP0CG48 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
UBCP0CG48 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.12□□□□□ -1.59
UBCP0CG48 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
UBCP0CG48 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
UBCP0CG48 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.12□□□□□ -1.59
UBCP0CG48 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
UBCP0CG48 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
UBCP0CG48 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
UBCP0CG48 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
UBCP0CG48 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
UBCP0CG48 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
UBCP0CG48 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.11□□□□□ -1.59
UBCP0CG48 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
UBCP0CG48 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.11□□□□□ -1.59
UBCP0CG48 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
UBCP0CG48 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
UBCP0CG48 RN7SKP78-201ENST00000364711 318 ntBASIC5.11□□□□□ -1.59
UBCP0CG48 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.11□□□□□ -1.59
UBCP0CG48 MIR551B-201ENST00000384984 96 ntBASIC5.11□□□□□ -1.59
UBCP0CG48 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
UBCP0CG48 AC087752.1-201ENST00000391360 558 ntBASIC5.11□□□□□ -1.59
UBCP0CG48 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.11□□□□□ -1.59
UBCP0CG48 RN7SKP108-201ENST00000411367 328 ntBASIC5.11□□□□□ -1.59
UBCP0CG48 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC5.11□□□□□ -1.59
UBCP0CG48 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.11□□□□□ -1.59
UBCP0CG48 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.11□□□□□ -1.59
UBCP0CG48 AL034379.1-201ENST00000423216 253 ntBASIC5.11□□□□□ -1.59
UBCP0CG48 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC5.11□□□□□ -1.59
UBCP0CG48 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.11□□□□□ -1.59
UBCP0CG48 UBQLN1P1-207ENST00000441056 1169 ntBASIC5.11□□□□□ -1.59
UBCP0CG48 AL445466.1-201ENST00000448432 357 ntBASIC5.11□□□□□ -1.59
UBCP0CG48 MEMO1P4-201ENST00000453590 386 ntBASIC5.11□□□□□ -1.59
UBCP0CG48 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.11□□□□□ -1.59
UBCP0CG48 RN7SL197P-201ENST00000466981 299 ntBASIC5.11□□□□□ -1.59
UBCP0CG48 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC5.11□□□□□ -1.59
UBCP0CG48 Vault.2-201ENST00000516519 98 ntBASIC5.11□□□□□ -1.59
UBCP0CG48 AC020937.1-201ENST00000519677 1013 ntBASIC5.11□□□□□ -1.59
UBCP0CG48 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.11□□□□□ -1.59
UBCP0CG48 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC5.11□□□□□ -1.59
UBCP0CG48 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.11□□□□□ -1.59
UBCP0CG48 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.11□□□□□ -1.59
UBCP0CG48 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.11□□□□□ -1.59
UBCP0CG48 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.11□□□□□ -1.59
UBCP0CG48 GARSP1-201ENST00000570895 719 ntBASIC5.11□□□□□ -1.59
UBCP0CG48 MIR4660-201ENST00000583549 74 ntBASIC5.11□□□□□ -1.59
UBCP0CG48 SMIM12P1-201ENST00000603004 274 ntBASIC5.11□□□□□ -1.59
UBCP0CG48 HIRAP1-201ENST00000605318 787 ntBASIC5.11□□□□□ -1.59
UBCP0CG48 AL353729.2-201ENST00000605859 1249 ntBASIC5.11□□□□□ -1.59
UBCP0CG48 AC092681.3-201ENST00000609463 678 ntBASIC5.11□□□□□ -1.59
UBCP0CG48 AL139099.4-201ENST00000614802 114 ntBASIC5.11□□□□□ -1.59
UBCP0CG48 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC5.11□□□□□ -1.59
UBCP0CG48 AL357153.4-201ENST00000620487 1016 ntBASIC5.11□□□□□ -1.59
UBCP0CG48 AC096708.4-201ENST00000620563 552 ntBASIC5.11□□□□□ -1.59
UBCP0CG48 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.11□□□□□ -1.59
UBCP0CG48 TEX41-279ENST00000629149 609 ntTSL 5 BASIC5.11□□□□□ -1.59
UBCP0CG48 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.11□□□□□ -1.59
UBCP0CG48 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.11□□□□□ -1.59
UBCP0CG48 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.11□□□□□ -1.59
UBCP0CG48 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
UBCP0CG48 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.11□□□□□ -1.59
UBCP0CG48 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC5.11□□□□□ -1.59
UBCP0CG48 RBPJP7-201ENST00000442803 1447 ntBASIC5.11□□□□□ -1.59
UBCP0CG48 RBPJP5-201ENST00000449433 1447 ntBASIC5.11□□□□□ -1.59
UBCP0CG48 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
UBCP0CG48 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC5.11□□□□□ -1.59
UBCP0CG48 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
UBCP0CG48 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
UBCP0CG48 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
UBCP0CG48 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.11□□□□□ -1.59
UBCP0CG48 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.11□□□□□ -1.59
UBCP0CG48 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.11□□□□□ -1.59
UBCP0CG48 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
UBCP0CG48 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.1□□□□□ -1.59
UBCP0CG48 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
UBCP0CG48 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
UBCP0CG48 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
UBCP0CG48 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
UBCP0CG48 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
UBCP0CG48 RNA5SP91-201ENST00000390902 119 ntBASIC5.1□□□□□ -1.59
UBCP0CG48 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
UBCP0CG48 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms