Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC4.86□□□□□ -1.63
CD74P04233 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
CD74P04233 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
CD74P04233 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
CD74P04233 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC4.86□□□□□ -1.63
CD74P04233 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CD74P04233 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.86□□□□□ -1.63
CD74P04233 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC4.86□□□□□ -1.63
CD74P04233 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC4.86□□□□□ -1.63
CD74P04233 RNF10P1-201ENST00000418589 369 ntBASIC4.86□□□□□ -1.63
CD74P04233 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC4.86□□□□□ -1.63
CD74P04233 NDUFB4P8-201ENST00000435351 367 ntBASIC4.86□□□□□ -1.63
CD74P04233 TRIM60P16-201ENST00000444048 694 ntBASIC4.86□□□□□ -1.63
CD74P04233 AL590004.3-202ENST00000445883 451 ntBASIC4.86□□□□□ -1.63
CD74P04233 PPIA-203ENST00000451562 544 ntTSL 2 BASIC4.86□□□□□ -1.63
CD74P04233 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CD74P04233 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC4.86□□□□□ -1.63
CD74P04233 RN7SL502P-201ENST00000481857 290 ntBASIC4.86□□□□□ -1.63
CD74P04233 AC009567.2-201ENST00000502989 349 ntBASIC4.86□□□□□ -1.63
CD74P04233 AC008629.2-201ENST00000503783 483 ntBASIC4.86□□□□□ -1.63
CD74P04233 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC4.86□□□□□ -1.63
CD74P04233 AC139697.1-201ENST00000548429 745 ntBASIC4.86□□□□□ -1.63
CD74P04233 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC4.86□□□□□ -1.63
CD74P04233 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC4.86□□□□□ -1.63
CD74P04233 GARSP1-201ENST00000570895 719 ntBASIC4.86□□□□□ -1.63
CD74P04233 STARD6-202ENST00000577499 696 ntTSL 2 BASIC4.86□□□□□ -1.63
CD74P04233 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC4.86□□□□□ -1.63
CD74P04233 IGKV2OR2-1-201ENST00000605129 304 ntBASIC4.86□□□□□ -1.63
CD74P04233 AC145423.1-201ENST00000605712 336 ntBASIC4.86□□□□□ -1.63
CD74P04233 NEK3-211ENST00000629912 141 ntTSL 5 BASIC4.86□□□□□ -1.63
CD74P04233 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC4.86□□□□□ -1.63
CD74P04233 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CD74P04233 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CD74P04233 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC4.86□□□□□ -1.63
CD74P04233 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CD74P04233 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.86□□□□□ -1.63
CD74P04233 MRRFP1-201ENST00000435941 1675 ntBASIC4.86□□□□□ -1.63
CD74P04233 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CD74P04233 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.86□□□□□ -1.63
CD74P04233 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC4.85□□□□□ -1.63
CD74P04233 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC4.85□□□□□ -1.63
CD74P04233 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
CD74P04233 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
CD74P04233 OR4F13P-202ENST00000560066 2054 ntBASIC4.85□□□□□ -1.63
CD74P04233 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
CD74P04233 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CD74P04233 AL121886.1-201ENST00000358609 435 ntBASIC4.85□□□□□ -1.63
CD74P04233 SNORA21-201ENST00000362423 132 ntBASIC4.85□□□□□ -1.63
CD74P04233 RNA5SP485-201ENST00000365053 119 ntBASIC4.85□□□□□ -1.63
CD74P04233 RNA5SP85-201ENST00000365378 119 ntBASIC4.85□□□□□ -1.63
CD74P04233 AC092634.1-201ENST00000366505 199 ntBASIC4.85□□□□□ -1.63
CD74P04233 SNORD94-201ENST00000386037 137 ntBASIC4.85□□□□□ -1.63
CD74P04233 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
CD74P04233 MIR1266-201ENST00000408125 84 ntBASIC4.85□□□□□ -1.63
CD74P04233 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC4.85□□□□□ -1.63
CD74P04233 OR6R1P-201ENST00000431838 940 ntBASIC4.85□□□□□ -1.63
CD74P04233 PCBP2P1-201ENST00000437262 977 ntBASIC4.85□□□□□ -1.63
CD74P04233 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC4.85□□□□□ -1.63
CD74P04233 FTLP8-201ENST00000446770 267 ntBASIC4.85□□□□□ -1.63
CD74P04233 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC4.85□□□□□ -1.63
CD74P04233 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC4.85□□□□□ -1.63
CD74P04233 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC4.85□□□□□ -1.63
CD74P04233 RN7SL39P-201ENST00000462264 297 ntBASIC4.85□□□□□ -1.63
CD74P04233 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.85□□□□□ -1.63
CD74P04233 AL157777.1-201ENST00000468100 304 ntBASIC4.85□□□□□ -1.63
CD74P04233 AC023245.1-201ENST00000468501 517 ntBASIC4.85□□□□□ -1.63
CD74P04233 AP003385.3-201ENST00000472498 287 ntBASIC4.85□□□□□ -1.63
CD74P04233 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CD74P04233 NACAP5-201ENST00000509863 636 ntBASIC4.85□□□□□ -1.63
CD74P04233 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC4.85□□□□□ -1.63
CD74P04233 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC4.85□□□□□ -1.63
CD74P04233 AC084851.2-201ENST00000530377 364 ntBASIC4.85□□□□□ -1.63
CD74P04233 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC4.85□□□□□ -1.63
CD74P04233 AC124891.1-201ENST00000536322 519 ntBASIC4.85□□□□□ -1.63
CD74P04233 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC4.85□□□□□ -1.63
CD74P04233 AC037479.1-201ENST00000558361 625 ntBASIC4.85□□□□□ -1.63
CD74P04233 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC4.85□□□□□ -1.63
CD74P04233 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC4.85□□□□□ -1.63
CD74P04233 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC4.85□□□□□ -1.63
CD74P04233 AL589765.6-201ENST00000601909 549 ntBASIC4.85□□□□□ -1.63
CD74P04233 Six3os1_2.1-201ENST00000616963 217 ntBASIC4.85□□□□□ -1.63
CD74P04233 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
CD74P04233 AC211486.4-201ENST00000621495 113 ntBASIC4.85□□□□□ -1.63
CD74P04233 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC4.85□□□□□ -1.63
CD74P04233 AC099654.6-201ENST00000636487 512 ntBASIC4.85□□□□□ -1.63
CD74P04233 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CD74P04233 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
CD74P04233 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC4.85□□□□□ -1.63
CD74P04233 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CD74P04233 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC4.85□□□□□ -1.63
CD74P04233 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CD74P04233 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CD74P04233 GNL2P1-201ENST00000451274 2190 ntBASIC4.85□□□□□ -1.63
CD74P04233 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.85□□□□□ -1.63
CD74P04233 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CD74P04233 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CD74P04233 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
CD74P04233 MFSD8-219ENST00000641228 2559 ntBASIC4.84□□□□□ -1.63
CD74P04233 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CD74P04233 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms