Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
MT-ND1P03886 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
MT-ND1P03886 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
MT-ND1P03886 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
MT-ND1P03886 AC007938.2-201ENST00000604666 2634 ntBASIC5.43□□□□□ -1.54
MT-ND1P03886 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.43□□□□□ -1.54
MT-ND1P03886 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
MT-ND1P03886 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
MT-ND1P03886 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
MT-ND1P03886 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
MT-ND1P03886 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
MT-ND1P03886 UGT2B24P-201ENST00000514441 1597 ntBASIC5.42□□□□□ -1.54
MT-ND1P03886 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
MT-ND1P03886 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
MT-ND1P03886 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
MT-ND1P03886 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
MT-ND1P03886 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.42□□□□□ -1.54
MT-ND1P03886 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.42□□□□□ -1.54
MT-ND1P03886 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
MT-ND1P03886 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.42□□□□□ -1.54
MT-ND1P03886 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
MT-ND1P03886 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.42□□□□□ -1.54
MT-ND1P03886 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.42□□□□□ -1.54
MT-ND1P03886 RNA5SP110-201ENST00000362638 115 ntBASIC5.42□□□□□ -1.54
MT-ND1P03886 RNU1-134P-201ENST00000362935 165 ntBASIC5.42□□□□□ -1.54
MT-ND1P03886 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC5.42□□□□□ -1.54
MT-ND1P03886 Z82198.3-201ENST00000421145 199 ntBASIC5.42□□□□□ -1.54
MT-ND1P03886 RPL7AP51-201ENST00000422016 760 ntBASIC5.42□□□□□ -1.54
MT-ND1P03886 TRGV7-201ENST00000427089 353 ntBASIC5.42□□□□□ -1.54
MT-ND1P03886 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.42□□□□□ -1.54
MT-ND1P03886 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC5.42□□□□□ -1.54
MT-ND1P03886 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC5.42□□□□□ -1.54
MT-ND1P03886 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.42□□□□□ -1.54
MT-ND1P03886 AL157777.1-201ENST00000468100 304 ntBASIC5.42□□□□□ -1.54
MT-ND1P03886 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
MT-ND1P03886 AP002453.1-201ENST00000492327 668 ntBASIC5.42□□□□□ -1.54
MT-ND1P03886 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.42□□□□□ -1.54
MT-ND1P03886 AC025766.1-201ENST00000514061 409 ntTSL 5 BASIC5.42□□□□□ -1.54
MT-ND1P03886 OR4A42P-201ENST00000531397 938 ntBASIC5.42□□□□□ -1.54
MT-ND1P03886 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.42□□□□□ -1.54
MT-ND1P03886 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC5.42□□□□□ -1.54
MT-ND1P03886 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.42□□□□□ -1.54
MT-ND1P03886 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.42□□□□□ -1.54
MT-ND1P03886 AC115989.2-201ENST00000578640 563 ntBASIC5.42□□□□□ -1.54
MT-ND1P03886 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC5.42□□□□□ -1.54
MT-ND1P03886 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.42□□□□□ -1.54
MT-ND1P03886 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
MT-ND1P03886 AL021918.2-201ENST00000613415 194 ntBASIC5.42□□□□□ -1.54
MT-ND1P03886 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
MT-ND1P03886 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.42□□□□□ -1.54
MT-ND1P03886 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC5.42□□□□□ -1.54
MT-ND1P03886 Z83820.1-201ENST00000456978 1499 ntBASIC5.42□□□□□ -1.54
MT-ND1P03886 CUL4AP1-201ENST00000514750 1863 ntBASIC5.42□□□□□ -1.54
MT-ND1P03886 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
MT-ND1P03886 AC112255.1-201ENST00000624070 2493 ntBASIC5.42□□□□□ -1.54
MT-ND1P03886 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
MT-ND1P03886 AC233968.1-201ENST00000611212 1300 ntBASIC5.42□□□□□ -1.54
MT-ND1P03886 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
MT-ND1P03886 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
MT-ND1P03886 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
MT-ND1P03886 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.42□□□□□ -1.54
MT-ND1P03886 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
MT-ND1P03886 RNF19BPY-201ENST00000458209 1550 ntBASIC5.42□□□□□ -1.54
MT-ND1P03886 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
MT-ND1P03886 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.42□□□□□ -1.54
MT-ND1P03886 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
MT-ND1P03886 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.41□□□□□ -1.54
MT-ND1P03886 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
MT-ND1P03886 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.41□□□□□ -1.54
MT-ND1P03886 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
MT-ND1P03886 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
MT-ND1P03886 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
MT-ND1P03886 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
MT-ND1P03886 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.41□□□□□ -1.54
MT-ND1P03886 GVINP1-202ENST00000531871 7271 ntBASIC5.41□□□□□ -1.54
MT-ND1P03886 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
MT-ND1P03886 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
MT-ND1P03886 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.41□□□□□ -1.54
MT-ND1P03886 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
MT-ND1P03886 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.41□□□□□ -1.54
MT-ND1P03886 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC5.41□□□□□ -1.54
MT-ND1P03886 AL133482.1-201ENST00000415988 498 ntBASIC5.41□□□□□ -1.54
MT-ND1P03886 RPS4XP5-201ENST00000419038 768 ntBASIC5.41□□□□□ -1.54
MT-ND1P03886 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.41□□□□□ -1.54
MT-ND1P03886 AL034379.1-201ENST00000423216 253 ntBASIC5.41□□□□□ -1.54
MT-ND1P03886 AC010240.2-201ENST00000445363 1205 ntBASIC5.41□□□□□ -1.54
MT-ND1P03886 AC007383.1-201ENST00000445875 636 ntBASIC5.41□□□□□ -1.54
MT-ND1P03886 FTLP8-201ENST00000446770 267 ntBASIC5.41□□□□□ -1.54
MT-ND1P03886 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.41□□□□□ -1.54
MT-ND1P03886 RPS27P20-201ENST00000492051 246 ntBASIC5.41□□□□□ -1.54
MT-ND1P03886 AC108103.1-201ENST00000511286 446 ntBASIC5.41□□□□□ -1.54
MT-ND1P03886 RFPL4AP3-201ENST00000515267 345 ntBASIC5.41□□□□□ -1.54
MT-ND1P03886 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC5.41□□□□□ -1.54
MT-ND1P03886 AC025423.2-201ENST00000537570 439 ntBASIC5.41□□□□□ -1.54
MT-ND1P03886 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.41□□□□□ -1.54
MT-ND1P03886 AC135626.1-201ENST00000556983 435 ntBASIC5.41□□□□□ -1.54
MT-ND1P03886 MIR4701-201ENST00000583094 63 ntBASIC5.41□□□□□ -1.54
MT-ND1P03886 AL135999.3-201ENST00000610501 812 ntBASIC5.41□□□□□ -1.54
MT-ND1P03886 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC5.41□□□□□ -1.54
MT-ND1P03886 MTCO1P28-201ENST00000574177 1528 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms