Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
LDLRP01130 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
LDLRP01130 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
LDLRP01130 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
LDLRP01130 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.82□□□□□ -1.48
LDLRP01130 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.82□□□□□ -1.48
LDLRP01130 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.82□□□□□ -1.48
LDLRP01130 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
LDLRP01130 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
LDLRP01130 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
LDLRP01130 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.81□□□□□ -1.48
LDLRP01130 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.81□□□□□ -1.48
LDLRP01130 NLRP3P1-201ENST00000622303 1785 ntBASIC5.81□□□□□ -1.48
LDLRP01130 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
LDLRP01130 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
LDLRP01130 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
LDLRP01130 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
LDLRP01130 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
LDLRP01130 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
LDLRP01130 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
LDLRP01130 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
LDLRP01130 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
LDLRP01130 AC083799.1-201ENST00000366451 910 ntBASIC5.81□□□□□ -1.48
LDLRP01130 SNORA51.9-201ENST00000384295 124 ntBASIC5.81□□□□□ -1.48
LDLRP01130 RNA5SP284-201ENST00000384547 118 ntBASIC5.81□□□□□ -1.48
LDLRP01130 CDY8P-201ENST00000428380 1279 ntBASIC5.81□□□□□ -1.48
LDLRP01130 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
LDLRP01130 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
LDLRP01130 XKRYP6-201ENST00000440468 1116 ntBASIC5.81□□□□□ -1.48
LDLRP01130 AL645936.1-201ENST00000441979 518 ntBASIC5.81□□□□□ -1.48
LDLRP01130 XKRYP3-201ENST00000442113 1116 ntBASIC5.81□□□□□ -1.48
LDLRP01130 CXCR2P1-202ENST00000443392 1074 ntBASIC5.81□□□□□ -1.48
LDLRP01130 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.81□□□□□ -1.48
LDLRP01130 CDY20P-201ENST00000447528 1279 ntBASIC5.81□□□□□ -1.48
LDLRP01130 NDUFA5P8-201ENST00000449019 346 ntBASIC5.81□□□□□ -1.48
LDLRP01130 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.81□□□□□ -1.48
LDLRP01130 RAB28P2-201ENST00000454299 641 ntBASIC5.81□□□□□ -1.48
LDLRP01130 AC073594.1-201ENST00000462065 364 ntBASIC5.81□□□□□ -1.48
LDLRP01130 AC023194.2-201ENST00000465398 406 ntBASIC5.81□□□□□ -1.48
LDLRP01130 RN7SL273P-201ENST00000481561 299 ntBASIC5.81□□□□□ -1.48
LDLRP01130 RPL12P30-201ENST00000488389 499 ntBASIC5.81□□□□□ -1.48
LDLRP01130 AC112184.1-201ENST00000505179 312 ntBASIC5.81□□□□□ -1.48
LDLRP01130 OR7E99P-201ENST00000505750 922 ntBASIC5.81□□□□□ -1.48
LDLRP01130 AC008638.1-201ENST00000506035 866 ntBASIC5.81□□□□□ -1.48
LDLRP01130 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC5.81□□□□□ -1.48
LDLRP01130 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC5.81□□□□□ -1.48
LDLRP01130 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.81□□□□□ -1.48
LDLRP01130 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC5.81□□□□□ -1.48
LDLRP01130 AC067805.1-201ENST00000559344 470 ntBASIC5.81□□□□□ -1.48
LDLRP01130 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.81□□□□□ -1.48
LDLRP01130 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.81□□□□□ -1.48
LDLRP01130 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.81□□□□□ -1.48
LDLRP01130 AC020916.2-201ENST00000591242 360 ntBASIC5.81□□□□□ -1.48
LDLRP01130 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.81□□□□□ -1.48
LDLRP01130 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC5.81□□□□□ -1.48
LDLRP01130 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.81□□□□□ -1.48
LDLRP01130 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.81□□□□□ -1.48
LDLRP01130 AL133445.2-201ENST00000611191 527 ntBASIC5.81□□□□□ -1.48
LDLRP01130 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.81□□□□□ -1.48
LDLRP01130 MIR6826-201ENST00000617808 98 ntBASIC5.81□□□□□ -1.48
LDLRP01130 MIR7159-201ENST00000620587 66 ntBASIC5.81□□□□□ -1.48
LDLRP01130 AL118508.4-201ENST00000624142 1176 ntBASIC5.81□□□□□ -1.48
LDLRP01130 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
LDLRP01130 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.81□□□□□ -1.48
LDLRP01130 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
LDLRP01130 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
LDLRP01130 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
LDLRP01130 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
LDLRP01130 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
LDLRP01130 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
LDLRP01130 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
LDLRP01130 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
LDLRP01130 SAMM50P1-201ENST00000455403 1399 ntBASIC5.8□□□□□ -1.48
LDLRP01130 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
LDLRP01130 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
LDLRP01130 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
LDLRP01130 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.8□□□□□ -1.48
LDLRP01130 AL359091.1-201ENST00000449048 1734 ntBASIC5.8□□□□□ -1.48
LDLRP01130 AC232271.1-201ENST00000602455 2715 ntBASIC5.8□□□□□ -1.48
LDLRP01130 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
LDLRP01130 TMSB4XP4-201ENST00000323496 618 ntBASIC5.8□□□□□ -1.48
LDLRP01130 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
LDLRP01130 AL050305.1-201ENST00000399993 1230 ntBASIC5.8□□□□□ -1.48
LDLRP01130 RN7SKP281-201ENST00000410472 352 ntBASIC5.8□□□□□ -1.48
LDLRP01130 DHFRP2-201ENST00000414224 547 ntBASIC5.8□□□□□ -1.48
LDLRP01130 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC5.8□□□□□ -1.48
LDLRP01130 RANP7-201ENST00000418085 644 ntBASIC5.8□□□□□ -1.48
LDLRP01130 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC5.8□□□□□ -1.48
LDLRP01130 BX510359.3-201ENST00000422168 306 ntBASIC5.8□□□□□ -1.48
LDLRP01130 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.8□□□□□ -1.48
LDLRP01130 MED28P4-201ENST00000433137 572 ntBASIC5.8□□□□□ -1.48
LDLRP01130 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
LDLRP01130 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.8□□□□□ -1.48
LDLRP01130 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC5.8□□□□□ -1.48
LDLRP01130 RAD1P2-201ENST00000446414 663 ntBASIC5.8□□□□□ -1.48
LDLRP01130 AC135999.1-201ENST00000478962 479 ntBASIC5.8□□□□□ -1.48
LDLRP01130 TRBV5-2-201ENST00000489095 273 ntBASIC5.8□□□□□ -1.48
LDLRP01130 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC5.8□□□□□ -1.48
LDLRP01130 AC097486.1-201ENST00000515331 210 ntBASIC5.8□□□□□ -1.48
LDLRP01130 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms