Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PDGFBP01127 RMRPP5-201ENST00000411156 267 ntBASIC5.99□□□□□ -1.45
PDGFBP01127 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC5.99□□□□□ -1.45
PDGFBP01127 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC5.99□□□□□ -1.45
PDGFBP01127 SLC35E1P1-201ENST00000419313 864 ntBASIC5.99□□□□□ -1.45
PDGFBP01127 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.99□□□□□ -1.45
PDGFBP01127 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.99□□□□□ -1.45
PDGFBP01127 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.99□□□□□ -1.45
PDGFBP01127 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.99□□□□□ -1.45
PDGFBP01127 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.99□□□□□ -1.45
PDGFBP01127 AL022331.1-201ENST00000429025 477 ntBASIC5.99□□□□□ -1.45
PDGFBP01127 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.99□□□□□ -1.45
PDGFBP01127 VN1R54P-201ENST00000435210 1049 ntBASIC5.99□□□□□ -1.45
PDGFBP01127 CYCSP12-201ENST00000437729 300 ntBASIC5.99□□□□□ -1.45
PDGFBP01127 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.99□□□□□ -1.45
PDGFBP01127 RPS7P3-201ENST00000443360 580 ntBASIC5.99□□□□□ -1.45
PDGFBP01127 AC104849.1-201ENST00000462623 405 ntBASIC5.99□□□□□ -1.45
PDGFBP01127 AC096754.1-201ENST00000508904 818 ntBASIC5.99□□□□□ -1.45
PDGFBP01127 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.99□□□□□ -1.45
PDGFBP01127 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.99□□□□□ -1.45
PDGFBP01127 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.99□□□□□ -1.45
PDGFBP01127 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC5.99□□□□□ -1.45
PDGFBP01127 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
PDGFBP01127 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.99□□□□□ -1.45
PDGFBP01127 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC5.99□□□□□ -1.45
PDGFBP01127 AC096996.1-201ENST00000563813 325 ntBASIC5.99□□□□□ -1.45
PDGFBP01127 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
PDGFBP01127 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
PDGFBP01127 MIR4433B-201ENST00000581329 102 ntBASIC5.99□□□□□ -1.45
PDGFBP01127 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC5.99□□□□□ -1.45
PDGFBP01127 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
PDGFBP01127 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
PDGFBP01127 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC5.99□□□□□ -1.45
PDGFBP01127 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
PDGFBP01127 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PDGFBP01127 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC5.99□□□□□ -1.45
PDGFBP01127 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC5.99□□□□□ -1.45
PDGFBP01127 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PDGFBP01127 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC5.99□□□□□ -1.45
PDGFBP01127 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PDGFBP01127 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PDGFBP01127 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PDGFBP01127 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC5.99□□□□□ -1.45
PDGFBP01127 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.99□□□□□ -1.45
PDGFBP01127 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.99□□□□□ -1.45
PDGFBP01127 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
PDGFBP01127 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
PDGFBP01127 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC5.98□□□□□ -1.45
PDGFBP01127 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
PDGFBP01127 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.98□□□□□ -1.45
PDGFBP01127 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
PDGFBP01127 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.98□□□□□ -1.45
PDGFBP01127 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
PDGFBP01127 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
PDGFBP01127 HMGA1P8-201ENST00000414130 321 ntBASIC5.98□□□□□ -1.45
PDGFBP01127 RPL26P29-201ENST00000415623 438 ntBASIC5.98□□□□□ -1.45
PDGFBP01127 UBE2V1P14-201ENST00000415815 558 ntBASIC5.98□□□□□ -1.45
PDGFBP01127 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.98□□□□□ -1.45
PDGFBP01127 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.98□□□□□ -1.45
PDGFBP01127 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC5.98□□□□□ -1.45
PDGFBP01127 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.98□□□□□ -1.45
PDGFBP01127 PA2G4P6-201ENST00000438325 1197 ntBASIC5.98□□□□□ -1.45
PDGFBP01127 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.98□□□□□ -1.45
PDGFBP01127 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.98□□□□□ -1.45
PDGFBP01127 HIGD1AP8-201ENST00000453927 274 ntBASIC5.98□□□□□ -1.45
PDGFBP01127 IGKV1OR22-5-201ENST00000458718 354 ntBASIC5.98□□□□□ -1.45
PDGFBP01127 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
PDGFBP01127 RN7SL583P-201ENST00000475692 287 ntBASIC5.98□□□□□ -1.45
PDGFBP01127 EIF1P7-201ENST00000487533 337 ntBASIC5.98□□□□□ -1.45
PDGFBP01127 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC5.98□□□□□ -1.45
PDGFBP01127 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.98□□□□□ -1.45
PDGFBP01127 SCARNA6.1-201ENST00000516989 238 ntBASIC5.98□□□□□ -1.45
PDGFBP01127 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC5.98□□□□□ -1.45
PDGFBP01127 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC5.98□□□□□ -1.45
PDGFBP01127 AC084337.1-201ENST00000524809 686 ntBASIC5.98□□□□□ -1.45
PDGFBP01127 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC5.98□□□□□ -1.45
PDGFBP01127 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC5.98□□□□□ -1.45
PDGFBP01127 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.98□□□□□ -1.45
PDGFBP01127 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC5.98□□□□□ -1.45
PDGFBP01127 AL596275.2-208ENST00000641192 594 ntBASIC5.98□□□□□ -1.45
PDGFBP01127 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
PDGFBP01127 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
PDGFBP01127 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
PDGFBP01127 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.98□□□□□ -1.45
PDGFBP01127 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.98□□□□□ -1.45
PDGFBP01127 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
PDGFBP01127 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
PDGFBP01127 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
PDGFBP01127 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
PDGFBP01127 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.98□□□□□ -1.45
PDGFBP01127 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
PDGFBP01127 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PDGFBP01127 AC010329.1-201ENST00000593903 8328 ntBASIC5.97□□□□□ -1.45
PDGFBP01127 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
PDGFBP01127 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PDGFBP01127 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PDGFBP01127 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.97□□□□□ -1.45
PDGFBP01127 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PDGFBP01127 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PDGFBP01127 DDX18P6-201ENST00000450119 1997 ntBASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 161.4 ms