Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CLDN9O95484 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CLDN9O95484 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
CLDN9O95484 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.57□□□□□ -1.52
CLDN9O95484 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
CLDN9O95484 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CLDN9O95484 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
CLDN9O95484 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
CLDN9O95484 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CLDN9O95484 RN7SKP187-201ENST00000365536 330 ntBASIC5.57□□□□□ -1.52
CLDN9O95484 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.57□□□□□ -1.52
CLDN9O95484 AC010740.1-201ENST00000417035 684 ntBASIC5.57□□□□□ -1.52
CLDN9O95484 AL354868.1-201ENST00000417077 482 ntBASIC5.57□□□□□ -1.52
CLDN9O95484 OR5W1P-201ENST00000423705 938 ntBASIC5.57□□□□□ -1.52
CLDN9O95484 AC115283.1-201ENST00000427353 400 ntBASIC5.57□□□□□ -1.52
CLDN9O95484 AMYP1-201ENST00000440059 1023 ntBASIC5.57□□□□□ -1.52
CLDN9O95484 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.57□□□□□ -1.52
CLDN9O95484 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.57□□□□□ -1.52
CLDN9O95484 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.57□□□□□ -1.52
CLDN9O95484 RPS7P6-201ENST00000485777 579 ntBASIC5.57□□□□□ -1.52
CLDN9O95484 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.57□□□□□ -1.52
CLDN9O95484 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.57□□□□□ -1.52
CLDN9O95484 RN7SL284P-201ENST00000498823 275 ntBASIC5.57□□□□□ -1.52
CLDN9O95484 LSM3P4-201ENST00000502948 309 ntBASIC5.57□□□□□ -1.52
CLDN9O95484 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.57□□□□□ -1.52
CLDN9O95484 AC074255.1-201ENST00000511259 501 ntBASIC5.57□□□□□ -1.52
CLDN9O95484 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.57□□□□□ -1.52
CLDN9O95484 AC111000.6-201ENST00000514471 709 ntBASIC5.57□□□□□ -1.52
CLDN9O95484 AC021146.10-201ENST00000515628 706 ntBASIC5.57□□□□□ -1.52
CLDN9O95484 AC011853.1-201ENST00000518911 454 ntBASIC5.57□□□□□ -1.52
CLDN9O95484 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.57□□□□□ -1.52
CLDN9O95484 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.57□□□□□ -1.52
CLDN9O95484 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.57□□□□□ -1.52
CLDN9O95484 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.57□□□□□ -1.52
CLDN9O95484 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.57□□□□□ -1.52
CLDN9O95484 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC5.57□□□□□ -1.52
CLDN9O95484 AL356801.1-201ENST00000559320 294 ntBASIC5.57□□□□□ -1.52
CLDN9O95484 CYCSP38-201ENST00000559840 322 ntBASIC5.57□□□□□ -1.52
CLDN9O95484 MIR4260-201ENST00000583107 67 ntBASIC5.57□□□□□ -1.52
CLDN9O95484 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC5.57□□□□□ -1.52
CLDN9O95484 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CLDN9O95484 MIR6071-201ENST00000616741 78 ntBASIC5.57□□□□□ -1.52
CLDN9O95484 AL591926.1-201ENST00000620542 217 ntBASIC5.57□□□□□ -1.52
CLDN9O95484 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.57□□□□□ -1.52
CLDN9O95484 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CLDN9O95484 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CLDN9O95484 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CLDN9O95484 AL355834.1-201ENST00000556602 3965 ntBASIC5.57□□□□□ -1.52
CLDN9O95484 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CLDN9O95484 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CLDN9O95484 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.56□□□□□ -1.52
CLDN9O95484 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CLDN9O95484 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.56□□□□□ -1.52
CLDN9O95484 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.56□□□□□ -1.52
CLDN9O95484 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.56□□□□□ -1.52
CLDN9O95484 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
CLDN9O95484 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CLDN9O95484 AL050305.1-201ENST00000399993 1230 ntBASIC5.56□□□□□ -1.52
CLDN9O95484 OR7E156P-201ENST00000400303 464 ntBASIC5.56□□□□□ -1.52
CLDN9O95484 VN1R12P-201ENST00000403778 876 ntBASIC5.56□□□□□ -1.52
CLDN9O95484 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.56□□□□□ -1.52
CLDN9O95484 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.56□□□□□ -1.52
CLDN9O95484 AC126120.1-201ENST00000431082 470 ntBASIC5.56□□□□□ -1.52
CLDN9O95484 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
CLDN9O95484 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.56□□□□□ -1.52
CLDN9O95484 AC007679.3-201ENST00000434035 414 ntBASIC5.56□□□□□ -1.52
CLDN9O95484 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.56□□□□□ -1.52
CLDN9O95484 AC068491.1-201ENST00000449539 1241 ntBASIC5.56□□□□□ -1.52
CLDN9O95484 AC093166.4-201ENST00000457867 318 ntBASIC5.56□□□□□ -1.52
CLDN9O95484 RPS23P2-201ENST00000463671 415 ntBASIC5.56□□□□□ -1.52
CLDN9O95484 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CLDN9O95484 GAPDHP62-201ENST00000515313 990 ntBASIC5.56□□□□□ -1.52
CLDN9O95484 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.56□□□□□ -1.52
CLDN9O95484 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.56□□□□□ -1.52
CLDN9O95484 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.56□□□□□ -1.52
CLDN9O95484 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.56□□□□□ -1.52
CLDN9O95484 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.56□□□□□ -1.52
CLDN9O95484 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.56□□□□□ -1.52
CLDN9O95484 AL583832.1-201ENST00000603227 784 ntBASIC5.56□□□□□ -1.52
CLDN9O95484 AL353729.2-201ENST00000605859 1249 ntBASIC5.56□□□□□ -1.52
CLDN9O95484 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.56□□□□□ -1.52
CLDN9O95484 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC5.56□□□□□ -1.52
CLDN9O95484 AC015712.7-201ENST00000615211 635 ntBASIC5.56□□□□□ -1.52
CLDN9O95484 AL512356.3-201ENST00000623005 461 ntBASIC5.56□□□□□ -1.52
CLDN9O95484 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.56□□□□□ -1.52
CLDN9O95484 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
CLDN9O95484 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CLDN9O95484 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.56□□□□□ -1.52
CLDN9O95484 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.56□□□□□ -1.52
CLDN9O95484 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CLDN9O95484 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CLDN9O95484 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.56□□□□□ -1.52
CLDN9O95484 AC009962.1-201ENST00000567327 3813 ntBASIC5.56□□□□□ -1.52
CLDN9O95484 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CLDN9O95484 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CLDN9O95484 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
CLDN9O95484 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CLDN9O95484 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CLDN9O95484 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
CLDN9O95484 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms