Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AC093166.3-201ENST00000448785 303 ntBASIC5.56□□□□□ -1.52
NKX2-2O95096 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.56□□□□□ -1.52
NKX2-2O95096 AC104164.1-201ENST00000460282 590 ntBASIC5.56□□□□□ -1.52
NKX2-2O95096 AC005165.2-201ENST00000466070 380 ntBASIC5.56□□□□□ -1.52
NKX2-2O95096 AC021006.1-201ENST00000489849 553 ntBASIC5.56□□□□□ -1.52
NKX2-2O95096 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.56□□□□□ -1.52
NKX2-2O95096 PRMT5P1-201ENST00000514351 598 ntBASIC5.56□□□□□ -1.52
NKX2-2O95096 RNA5SP116-201ENST00000516132 98 ntBASIC5.56□□□□□ -1.52
NKX2-2O95096 RN7SKP183-201ENST00000517169 324 ntBASIC5.56□□□□□ -1.52
NKX2-2O95096 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.56□□□□□ -1.52
NKX2-2O95096 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC5.56□□□□□ -1.52
NKX2-2O95096 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC5.56□□□□□ -1.52
NKX2-2O95096 OR4R2P-201ENST00000530815 597 ntBASIC5.56□□□□□ -1.52
NKX2-2O95096 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.56□□□□□ -1.52
NKX2-2O95096 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.56□□□□□ -1.52
NKX2-2O95096 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC5.56□□□□□ -1.52
NKX2-2O95096 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC5.56□□□□□ -1.52
NKX2-2O95096 AC020978.7-201ENST00000575953 1187 ntBASIC5.56□□□□□ -1.52
NKX2-2O95096 MIR4502-201ENST00000580432 81 ntBASIC5.56□□□□□ -1.52
NKX2-2O95096 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
NKX2-2O95096 AP004372.1-201ENST00000604842 844 ntBASIC5.56□□□□□ -1.52
NKX2-2O95096 CR589904.2-201ENST00000612533 440 ntBASIC5.56□□□□□ -1.52
NKX2-2O95096 uc_338.26-201ENST00000612659 160 ntBASIC5.56□□□□□ -1.52
NKX2-2O95096 MIR6889-201ENST00000613185 59 ntBASIC5.56□□□□□ -1.52
NKX2-2O95096 AC017002.4-201ENST00000604721 1525 ntBASIC5.56□□□□□ -1.52
NKX2-2O95096 AP001002.1-201ENST00000625148 1513 ntBASIC5.56□□□□□ -1.52
NKX2-2O95096 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC5.56□□□□□ -1.52
NKX2-2O95096 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
NKX2-2O95096 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
NKX2-2O95096 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
NKX2-2O95096 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
NKX2-2O95096 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.56□□□□□ -1.52
NKX2-2O95096 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.56□□□□□ -1.52
NKX2-2O95096 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
NKX2-2O95096 RBPJP7-201ENST00000442803 1447 ntBASIC5.56□□□□□ -1.52
NKX2-2O95096 RBPJP5-201ENST00000449433 1447 ntBASIC5.56□□□□□ -1.52
NKX2-2O95096 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC5.56□□□□□ -1.52
NKX2-2O95096 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.55□□□□□ -1.52
NKX2-2O95096 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.55□□□□□ -1.52
NKX2-2O95096 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC5.55□□□□□ -1.52
NKX2-2O95096 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC5.55□□□□□ -1.52
NKX2-2O95096 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
NKX2-2O95096 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC5.55□□□□□ -1.52
NKX2-2O95096 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
NKX2-2O95096 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
NKX2-2O95096 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC5.55□□□□□ -1.52
NKX2-2O95096 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
NKX2-2O95096 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
NKX2-2O95096 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
NKX2-2O95096 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
NKX2-2O95096 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
NKX2-2O95096 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.55□□□□□ -1.52
NKX2-2O95096 SNORD115-48-201ENST00000364764 76 ntBASIC5.55□□□□□ -1.52
NKX2-2O95096 RNA5SP211-201ENST00000365516 117 ntBASIC5.55□□□□□ -1.52
NKX2-2O95096 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
NKX2-2O95096 AL672167.2-201ENST00000377164 879 ntBASIC5.55□□□□□ -1.52
NKX2-2O95096 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
NKX2-2O95096 AL121977.1-201ENST00000401636 979 ntBASIC5.55□□□□□ -1.52
NKX2-2O95096 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
NKX2-2O95096 MIR1275-201ENST00000408770 80 ntBASIC5.55□□□□□ -1.52
NKX2-2O95096 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.55□□□□□ -1.52
NKX2-2O95096 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.55□□□□□ -1.52
NKX2-2O95096 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC5.55□□□□□ -1.52
NKX2-2O95096 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
NKX2-2O95096 RPS26P4-201ENST00000431743 355 ntBASIC5.55□□□□□ -1.52
NKX2-2O95096 ZNF965P-201ENST00000432501 817 ntBASIC5.55□□□□□ -1.52
NKX2-2O95096 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.55□□□□□ -1.52
NKX2-2O95096 PNKDP1-201ENST00000435914 430 ntBASIC5.55□□□□□ -1.52
NKX2-2O95096 EEF1B2P3-201ENST00000447718 678 ntBASIC5.55□□□□□ -1.52
NKX2-2O95096 AL445466.1-201ENST00000448432 357 ntBASIC5.55□□□□□ -1.52
NKX2-2O95096 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
NKX2-2O95096 AC239798.3-201ENST00000454459 408 ntBASIC5.55□□□□□ -1.52
NKX2-2O95096 AC092865.4-201ENST00000477936 615 ntBASIC5.55□□□□□ -1.52
NKX2-2O95096 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.55□□□□□ -1.52
NKX2-2O95096 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.55□□□□□ -1.52
NKX2-2O95096 TRBV5-2-201ENST00000489095 273 ntBASIC5.55□□□□□ -1.52
NKX2-2O95096 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.55□□□□□ -1.52
NKX2-2O95096 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC5.55□□□□□ -1.52
NKX2-2O95096 AC106806.2-201ENST00000509365 500 ntBASIC5.55□□□□□ -1.52
NKX2-2O95096 AC093770.1-201ENST00000511559 571 ntBASIC5.55□□□□□ -1.52
NKX2-2O95096 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC5.55□□□□□ -1.52
NKX2-2O95096 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.55□□□□□ -1.52
NKX2-2O95096 IGKV3D-25-201ENST00000519599 235 ntBASIC5.55□□□□□ -1.52
NKX2-2O95096 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.55□□□□□ -1.52
NKX2-2O95096 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
NKX2-2O95096 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
NKX2-2O95096 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.55□□□□□ -1.52
NKX2-2O95096 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.55□□□□□ -1.52
NKX2-2O95096 AC008126.1-201ENST00000549019 480 ntBASIC5.55□□□□□ -1.52
NKX2-2O95096 CR383656.14-201ENST00000551951 406 ntBASIC5.55□□□□□ -1.52
NKX2-2O95096 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
NKX2-2O95096 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC5.55□□□□□ -1.52
NKX2-2O95096 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
NKX2-2O95096 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.55□□□□□ -1.52
NKX2-2O95096 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.55□□□□□ -1.52
NKX2-2O95096 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.55□□□□□ -1.52
NKX2-2O95096 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.55□□□□□ -1.52
NKX2-2O95096 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC5.55□□□□□ -1.52
NKX2-2O95096 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.55□□□□□ -1.52
NKX2-2O95096 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms