Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
LMX1BO60663 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.28□□□□□ -1.56
LMX1BO60663 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC5.28□□□□□ -1.56
LMX1BO60663 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
LMX1BO60663 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
LMX1BO60663 SNORA51.9-201ENST00000384295 124 ntBASIC5.28□□□□□ -1.56
LMX1BO60663 AL031985.1-201ENST00000392713 418 ntBASIC5.28□□□□□ -1.56
LMX1BO60663 RN7SKP108-201ENST00000411367 328 ntBASIC5.28□□□□□ -1.56
LMX1BO60663 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC5.28□□□□□ -1.56
LMX1BO60663 GTF3AP1-201ENST00000416942 1004 ntBASIC5.28□□□□□ -1.56
LMX1BO60663 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC5.28□□□□□ -1.56
LMX1BO60663 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.28□□□□□ -1.56
LMX1BO60663 RPS15AP29-201ENST00000445539 400 ntBASIC5.28□□□□□ -1.56
LMX1BO60663 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.28□□□□□ -1.56
LMX1BO60663 RPL31P15-201ENST00000449770 338 ntBASIC5.28□□□□□ -1.56
LMX1BO60663 AL162739.1-201ENST00000450606 307 ntBASIC5.28□□□□□ -1.56
LMX1BO60663 HIGD1AP16-201ENST00000450986 258 ntBASIC5.28□□□□□ -1.56
LMX1BO60663 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC5.28□□□□□ -1.56
LMX1BO60663 RN7SL352P-201ENST00000466002 277 ntBASIC5.28□□□□□ -1.56
LMX1BO60663 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
LMX1BO60663 RPL34P33-201ENST00000486062 334 ntBASIC5.28□□□□□ -1.56
LMX1BO60663 PPIAP19-201ENST00000486414 492 ntBASIC5.28□□□□□ -1.56
LMX1BO60663 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC5.28□□□□□ -1.56
LMX1BO60663 OR7E99P-201ENST00000505750 922 ntBASIC5.28□□□□□ -1.56
LMX1BO60663 AC025458.1-201ENST00000506046 166 ntBASIC5.28□□□□□ -1.56
LMX1BO60663 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.28□□□□□ -1.56
LMX1BO60663 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.28□□□□□ -1.56
LMX1BO60663 KHDC1P1-201ENST00000511053 508 ntBASIC5.28□□□□□ -1.56
LMX1BO60663 PRMT5P1-201ENST00000514351 598 ntBASIC5.28□□□□□ -1.56
LMX1BO60663 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.28□□□□□ -1.56
LMX1BO60663 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC5.28□□□□□ -1.56
LMX1BO60663 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.28□□□□□ -1.56
LMX1BO60663 AC036111.2-201ENST00000533247 901 ntBASIC5.28□□□□□ -1.56
LMX1BO60663 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.28□□□□□ -1.56
LMX1BO60663 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.28□□□□□ -1.56
LMX1BO60663 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC5.28□□□□□ -1.56
LMX1BO60663 AC007346.1-201ENST00000569208 867 ntBASIC5.28□□□□□ -1.56
LMX1BO60663 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.28□□□□□ -1.56
LMX1BO60663 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.28□□□□□ -1.56
LMX1BO60663 AC098483.2-201ENST00000603158 454 ntBASIC5.28□□□□□ -1.56
LMX1BO60663 AC100767.2-201ENST00000604840 693 ntBASIC5.28□□□□□ -1.56
LMX1BO60663 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC5.28□□□□□ -1.56
LMX1BO60663 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC5.28□□□□□ -1.56
LMX1BO60663 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.28□□□□□ -1.56
LMX1BO60663 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.28□□□□□ -1.56
LMX1BO60663 AC006249.1-201ENST00000621223 471 ntBASIC5.28□□□□□ -1.56
LMX1BO60663 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.28□□□□□ -1.56
LMX1BO60663 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
LMX1BO60663 AC015799.1-201ENST00000622996 3122 ntBASIC5.28□□□□□ -1.56
LMX1BO60663 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.28□□□□□ -1.56
LMX1BO60663 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.28□□□□□ -1.56
LMX1BO60663 AC024651.2-201ENST00000562480 2098 ntBASIC5.28□□□□□ -1.56
LMX1BO60663 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
LMX1BO60663 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
LMX1BO60663 AC011416.1-201ENST00000514947 1732 ntBASIC5.28□□□□□ -1.56
LMX1BO60663 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
LMX1BO60663 MTCO1P22-201ENST00000604619 1360 ntBASIC5.28□□□□□ -1.56
LMX1BO60663 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
LMX1BO60663 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
LMX1BO60663 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
LMX1BO60663 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
LMX1BO60663 AC016583.1-201ENST00000624221 2431 ntBASIC5.27□□□□□ -1.57
LMX1BO60663 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
LMX1BO60663 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.27□□□□□ -1.57
LMX1BO60663 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.27□□□□□ -1.57
LMX1BO60663 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
LMX1BO60663 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC5.27□□□□□ -1.57
LMX1BO60663 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.27□□□□□ -1.57
LMX1BO60663 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC5.27□□□□□ -1.57
LMX1BO60663 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
LMX1BO60663 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
LMX1BO60663 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
LMX1BO60663 OR7E25P-201ENST00000344844 931 ntBASIC5.27□□□□□ -1.57
LMX1BO60663 MIR323A-201ENST00000362199 86 ntBASIC5.27□□□□□ -1.57
LMX1BO60663 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
LMX1BO60663 AL121977.1-201ENST00000401636 979 ntBASIC5.27□□□□□ -1.57
LMX1BO60663 RN7SKP144-201ENST00000411108 279 ntBASIC5.27□□□□□ -1.57
LMX1BO60663 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
LMX1BO60663 KIF4CP-201ENST00000422742 1279 ntBASIC5.27□□□□□ -1.57
LMX1BO60663 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.27□□□□□ -1.57
LMX1BO60663 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.27□□□□□ -1.57
LMX1BO60663 AC073109.1-201ENST00000445066 978 ntBASIC5.27□□□□□ -1.57
LMX1BO60663 NXT1P1-201ENST00000458481 316 ntBASIC5.27□□□□□ -1.57
LMX1BO60663 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC5.27□□□□□ -1.57
LMX1BO60663 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC5.27□□□□□ -1.57
LMX1BO60663 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
LMX1BO60663 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.27□□□□□ -1.57
LMX1BO60663 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.27□□□□□ -1.57
LMX1BO60663 AC006499.4-201ENST00000510947 694 ntBASIC5.27□□□□□ -1.57
LMX1BO60663 TOMM22P4-201ENST00000511318 336 ntBASIC5.27□□□□□ -1.57
LMX1BO60663 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC5.27□□□□□ -1.57
LMX1BO60663 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.27□□□□□ -1.57
LMX1BO60663 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.27□□□□□ -1.57
LMX1BO60663 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.27□□□□□ -1.57
LMX1BO60663 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.27□□□□□ -1.57
LMX1BO60663 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.27□□□□□ -1.57
LMX1BO60663 MTND1P8-201ENST00000571424 950 ntBASIC5.27□□□□□ -1.57
LMX1BO60663 MTND2P13-201ENST00000577438 1039 ntBASIC5.27□□□□□ -1.57
LMX1BO60663 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC5.27□□□□□ -1.57
LMX1BO60663 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms