Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.43□□□□□ -1.54
ZIC3O60481 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.43□□□□□ -1.54
ZIC3O60481 NMD3P2-201ENST00000421815 761 ntBASIC5.43□□□□□ -1.54
ZIC3O60481 AC002069.1-201ENST00000429649 1159 ntBASIC5.43□□□□□ -1.54
ZIC3O60481 Z99127.2-201ENST00000441426 334 ntBASIC5.43□□□□□ -1.54
ZIC3O60481 RPS10P18-201ENST00000442662 495 ntBASIC5.43□□□□□ -1.54
ZIC3O60481 SDC4P-201ENST00000453285 601 ntBASIC5.43□□□□□ -1.54
ZIC3O60481 AC023245.1-201ENST00000468501 517 ntBASIC5.43□□□□□ -1.54
ZIC3O60481 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
ZIC3O60481 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
ZIC3O60481 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.43□□□□□ -1.54
ZIC3O60481 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.43□□□□□ -1.54
ZIC3O60481 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC5.43□□□□□ -1.54
ZIC3O60481 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.43□□□□□ -1.54
ZIC3O60481 RNA5SP438-201ENST00000516561 112 ntBASIC5.43□□□□□ -1.54
ZIC3O60481 RNU6-889P-201ENST00000517189 103 ntBASIC5.43□□□□□ -1.54
ZIC3O60481 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
ZIC3O60481 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
ZIC3O60481 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.43□□□□□ -1.54
ZIC3O60481 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
ZIC3O60481 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC5.43□□□□□ -1.54
ZIC3O60481 AC106785.3-201ENST00000564064 847 ntBASIC5.43□□□□□ -1.54
ZIC3O60481 AP001496.3-201ENST00000580230 913 ntBASIC5.43□□□□□ -1.54
ZIC3O60481 AL133247.2-201ENST00000603236 482 ntBASIC5.43□□□□□ -1.54
ZIC3O60481 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.43□□□□□ -1.54
ZIC3O60481 HMGB1P51-201ENST00000605166 638 ntBASIC5.43□□□□□ -1.54
ZIC3O60481 AL450270.1-201ENST00000606160 391 ntBASIC5.43□□□□□ -1.54
ZIC3O60481 AL136131.3-201ENST00000607600 188 ntBASIC5.43□□□□□ -1.54
ZIC3O60481 AL365181.4-201ENST00000609800 547 ntBASIC5.43□□□□□ -1.54
ZIC3O60481 MIR6793-201ENST00000612376 63 ntBASIC5.43□□□□□ -1.54
ZIC3O60481 AL445493.3-201ENST00000619568 477 ntBASIC5.43□□□□□ -1.54
ZIC3O60481 AC129778.1-202ENST00000623812 261 ntBASIC5.43□□□□□ -1.54
ZIC3O60481 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.43□□□□□ -1.54
ZIC3O60481 AL591379.1-207ENST00000635982 261 ntBASIC5.43□□□□□ -1.54
ZIC3O60481 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.43□□□□□ -1.54
ZIC3O60481 AC110792.3-201ENST00000595906 1614 ntBASIC5.43□□□□□ -1.54
ZIC3O60481 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.43□□□□□ -1.54
ZIC3O60481 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
ZIC3O60481 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
ZIC3O60481 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC5.43□□□□□ -1.54
ZIC3O60481 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
ZIC3O60481 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
ZIC3O60481 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC5.43□□□□□ -1.54
ZIC3O60481 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC5.43□□□□□ -1.54
ZIC3O60481 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC5.43□□□□□ -1.54
ZIC3O60481 OR10AB1P-202ENST00000641219 1686 ntBASIC5.43□□□□□ -1.54
ZIC3O60481 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC5.43□□□□□ -1.54
ZIC3O60481 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
ZIC3O60481 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
ZIC3O60481 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
ZIC3O60481 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
ZIC3O60481 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
ZIC3O60481 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.42□□□□□ -1.54
ZIC3O60481 CREM-203ENST00000344351 1625 ntTSL 2 BASIC5.42□□□□□ -1.54
ZIC3O60481 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
ZIC3O60481 AP000568.1-201ENST00000282964 442 ntBASIC5.42□□□□□ -1.54
ZIC3O60481 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
ZIC3O60481 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
ZIC3O60481 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
ZIC3O60481 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC5.42□□□□□ -1.54
ZIC3O60481 SEPT7P8-201ENST00000413308 775 ntBASIC5.42□□□□□ -1.54
ZIC3O60481 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.42□□□□□ -1.54
ZIC3O60481 RNF19BPX-201ENST00000426224 625 ntBASIC5.42□□□□□ -1.54
ZIC3O60481 AC016027.5-201ENST00000427227 210 ntBASIC5.42□□□□□ -1.54
ZIC3O60481 CDY8P-201ENST00000428380 1279 ntBASIC5.42□□□□□ -1.54
ZIC3O60481 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.42□□□□□ -1.54
ZIC3O60481 XKRY2-201ENST00000442362 1093 ntBASIC5.42□□□□□ -1.54
ZIC3O60481 BMS1P10-201ENST00000443754 1120 ntBASIC5.42□□□□□ -1.54
ZIC3O60481 CDY20P-201ENST00000447528 1279 ntBASIC5.42□□□□□ -1.54
ZIC3O60481 GEMIN2P1-201ENST00000454246 752 ntBASIC5.42□□□□□ -1.54
ZIC3O60481 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.42□□□□□ -1.54
ZIC3O60481 AC105918.1-201ENST00000474399 838 ntBASIC5.42□□□□□ -1.54
ZIC3O60481 AC124945.1-201ENST00000485133 188 ntBASIC5.42□□□□□ -1.54
ZIC3O60481 AC092902.1-201ENST00000486999 259 ntBASIC5.42□□□□□ -1.54
ZIC3O60481 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.42□□□□□ -1.54
ZIC3O60481 AC090543.1-201ENST00000492168 485 ntBASIC5.42□□□□□ -1.54
ZIC3O60481 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC5.42□□□□□ -1.54
ZIC3O60481 AC093763.2-201ENST00000505334 1223 ntBASIC5.42□□□□□ -1.54
ZIC3O60481 AC016550.1-201ENST00000505348 785 ntBASIC5.42□□□□□ -1.54
ZIC3O60481 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.42□□□□□ -1.54
ZIC3O60481 RNA5SP116-201ENST00000516132 98 ntBASIC5.42□□□□□ -1.54
ZIC3O60481 Y_RNA.667-201ENST00000516212 107 ntBASIC5.42□□□□□ -1.54
ZIC3O60481 SUMO2P19-201ENST00000518920 295 ntBASIC5.42□□□□□ -1.54
ZIC3O60481 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.42□□□□□ -1.54
ZIC3O60481 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC5.42□□□□□ -1.54
ZIC3O60481 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
ZIC3O60481 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.42□□□□□ -1.54
ZIC3O60481 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.42□□□□□ -1.54
ZIC3O60481 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.42□□□□□ -1.54
ZIC3O60481 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.42□□□□□ -1.54
ZIC3O60481 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.42□□□□□ -1.54
ZIC3O60481 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.42□□□□□ -1.54
ZIC3O60481 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC5.42□□□□□ -1.54
ZIC3O60481 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC5.42□□□□□ -1.54
ZIC3O60481 AC004890.3-201ENST00000605566 1095 ntBASIC5.42□□□□□ -1.54
ZIC3O60481 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC5.42□□□□□ -1.54
ZIC3O60481 AC022400.9-201ENST00000623633 273 ntBASIC5.42□□□□□ -1.54
ZIC3O60481 AC079298.2-201ENST00000623885 459 ntBASIC5.42□□□□□ -1.54
ZIC3O60481 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC5.42□□□□□ -1.54
ZIC3O60481 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms