Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC5.51□□□□□ -1.53
SSX4O60224 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SSX4O60224 CASC19-246ENST00000641625 1606 ntBASIC5.51□□□□□ -1.53
SSX4O60224 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SSX4O60224 AC104966.1-201ENST00000467010 1464 ntBASIC5.51□□□□□ -1.53
SSX4O60224 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
SSX4O60224 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SSX4O60224 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SSX4O60224 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.5□□□□□ -1.53
SSX4O60224 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC5.5□□□□□ -1.53
SSX4O60224 AL355488.2-201ENST00000609909 2850 ntBASIC5.5□□□□□ -1.53
SSX4O60224 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.5□□□□□ -1.53
SSX4O60224 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SSX4O60224 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.5□□□□□ -1.53
SSX4O60224 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SSX4O60224 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC5.5□□□□□ -1.53
SSX4O60224 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SSX4O60224 U3.23-201ENST00000391132 200 ntBASIC5.5□□□□□ -1.53
SSX4O60224 SNORA77.2-201ENST00000408571 112 ntBASIC5.5□□□□□ -1.53
SSX4O60224 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SSX4O60224 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.5□□□□□ -1.53
SSX4O60224 CDY17P-201ENST00000414121 1282 ntBASIC5.5□□□□□ -1.53
SSX4O60224 CR848007.2-201ENST00000424918 787 ntBASIC5.5□□□□□ -1.53
SSX4O60224 NPM1P26-201ENST00000426339 738 ntBASIC5.5□□□□□ -1.53
SSX4O60224 AC083862.1-201ENST00000427378 1242 ntBASIC5.5□□□□□ -1.53
SSX4O60224 CDY8P-201ENST00000428380 1279 ntBASIC5.5□□□□□ -1.53
SSX4O60224 BX276092.6-201ENST00000430476 250 ntBASIC5.5□□□□□ -1.53
SSX4O60224 RPS3AP38-201ENST00000435889 763 ntBASIC5.5□□□□□ -1.53
SSX4O60224 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC5.5□□□□□ -1.53
SSX4O60224 TXNP2-201ENST00000443918 295 ntBASIC5.5□□□□□ -1.53
SSX4O60224 RPL5P7-201ENST00000444235 813 ntBASIC5.5□□□□□ -1.53
SSX4O60224 CDY20P-201ENST00000447528 1279 ntBASIC5.5□□□□□ -1.53
SSX4O60224 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.5□□□□□ -1.53
SSX4O60224 BX276092.8-201ENST00000455722 250 ntBASIC5.5□□□□□ -1.53
SSX4O60224 AC094085.1-201ENST00000468914 584 ntBASIC5.5□□□□□ -1.53
SSX4O60224 AC022336.1-201ENST00000475510 337 ntBASIC5.5□□□□□ -1.53
SSX4O60224 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SSX4O60224 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.5□□□□□ -1.53
SSX4O60224 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC5.5□□□□□ -1.53
SSX4O60224 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
SSX4O60224 GOLGA5P1-201ENST00000507317 980 ntBASIC5.5□□□□□ -1.53
SSX4O60224 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
SSX4O60224 ZNF519P4-201ENST00000514008 125 ntBASIC5.5□□□□□ -1.53
SSX4O60224 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.5□□□□□ -1.53
SSX4O60224 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC5.5□□□□□ -1.53
SSX4O60224 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.5□□□□□ -1.53
SSX4O60224 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
SSX4O60224 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.5□□□□□ -1.53
SSX4O60224 QTRT1P1-201ENST00000604344 1078 ntBASIC5.5□□□□□ -1.53
SSX4O60224 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC5.5□□□□□ -1.53
SSX4O60224 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.5□□□□□ -1.53
SSX4O60224 AL162233.1-201ENST00000620014 944 ntBASIC5.5□□□□□ -1.53
SSX4O60224 AP001264.1-201ENST00000620602 703 ntBASIC5.5□□□□□ -1.53
SSX4O60224 AC020923.1-201ENST00000624021 917 ntBASIC5.5□□□□□ -1.53
SSX4O60224 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC5.5□□□□□ -1.53
SSX4O60224 LINC02495-203ENST00000636704 242 ntBASIC5.5□□□□□ -1.53
SSX4O60224 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
SSX4O60224 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SSX4O60224 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SSX4O60224 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SSX4O60224 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SSX4O60224 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
SSX4O60224 CNOT6LP1-201ENST00000559681 1462 ntBASIC5.5□□□□□ -1.53
SSX4O60224 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.5□□□□□ -1.53
SSX4O60224 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
SSX4O60224 OR10AB1P-202ENST00000641219 1686 ntBASIC5.5□□□□□ -1.53
SSX4O60224 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.5□□□□□ -1.53
SSX4O60224 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
SSX4O60224 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SSX4O60224 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SSX4O60224 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.49□□□□□ -1.53
SSX4O60224 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
SSX4O60224 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.49□□□□□ -1.53
SSX4O60224 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SSX4O60224 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
SSX4O60224 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
SSX4O60224 MTHFD2P5-201ENST00000320415 844 ntBASIC5.49□□□□□ -1.53
SSX4O60224 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
SSX4O60224 RNU6-883P-201ENST00000384597 107 ntBASIC5.49□□□□□ -1.53
SSX4O60224 RNU11-6P-201ENST00000391127 133 ntBASIC5.49□□□□□ -1.53
SSX4O60224 OR1F12-201ENST00000402365 945 ntBASIC5.49□□□□□ -1.53
SSX4O60224 RNA5SP198-201ENST00000410376 127 ntBASIC5.49□□□□□ -1.53
SSX4O60224 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.49□□□□□ -1.53
SSX4O60224 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC5.49□□□□□ -1.53
SSX4O60224 AL354707.3-201ENST00000427308 331 ntBASIC5.49□□□□□ -1.53
SSX4O60224 MTCO1P51-201ENST00000427672 1060 ntBASIC5.49□□□□□ -1.53
SSX4O60224 SEPT14P12-201ENST00000442280 560 ntBASIC5.49□□□□□ -1.53
SSX4O60224 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.49□□□□□ -1.53
SSX4O60224 CXCR2P1-202ENST00000443392 1074 ntBASIC5.49□□□□□ -1.53
SSX4O60224 OR13K1P-201ENST00000444577 975 ntBASIC5.49□□□□□ -1.53
SSX4O60224 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.49□□□□□ -1.53
SSX4O60224 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.49□□□□□ -1.53
SSX4O60224 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.49□□□□□ -1.53
SSX4O60224 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
SSX4O60224 AC105918.1-201ENST00000474399 838 ntBASIC5.49□□□□□ -1.53
SSX4O60224 RPL5P14-201ENST00000494197 878 ntBASIC5.49□□□□□ -1.53
SSX4O60224 AC105420.1-201ENST00000504389 582 ntBASIC5.49□□□□□ -1.53
SSX4O60224 SNX18P24-201ENST00000505249 671 ntBASIC5.49□□□□□ -1.53
SSX4O60224 AC091965.3-201ENST00000506236 208 ntBASIC5.49□□□□□ -1.53
SSX4O60224 AC131392.1-201ENST00000506490 633 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms