Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 MIR4675-201ENST00000577898 77 ntBASIC9.82□□□□□ -0.84
CUX2O14529 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
CUX2O14529 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
CUX2O14529 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
CUX2O14529 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
CUX2O14529 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC9.81□□□□□ -0.84
CUX2O14529 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC9.81□□□□□ -0.84
CUX2O14529 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
CUX2O14529 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
CUX2O14529 AC068189.1-201ENST00000501164 2632 ntTSL 2 BASIC9.81□□□□□ -0.84
CUX2O14529 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
CUX2O14529 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
CUX2O14529 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC9.81□□□□□ -0.84
CUX2O14529 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC9.81□□□□□ -0.84
CUX2O14529 AC092570.3-201ENST00000420113 693 ntBASIC9.81□□□□□ -0.84
CUX2O14529 AC099677.3-201ENST00000427081 395 ntBASIC9.81□□□□□ -0.84
CUX2O14529 AC044797.1-201ENST00000445744 679 ntBASIC9.81□□□□□ -0.84
CUX2O14529 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC9.81□□□□□ -0.84
CUX2O14529 ATP5A1P7-201ENST00000453978 1279 ntBASIC9.81□□□□□ -0.84
CUX2O14529 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC9.81□□□□□ -0.84
CUX2O14529 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC9.81□□□□□ -0.84
CUX2O14529 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC9.81□□□□□ -0.84
CUX2O14529 AC096754.1-201ENST00000508904 818 ntBASIC9.81□□□□□ -0.84
CUX2O14529 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC9.81□□□□□ -0.84
CUX2O14529 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC9.81□□□□□ -0.84
CUX2O14529 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC9.81□□□□□ -0.84
CUX2O14529 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC9.81□□□□□ -0.84
CUX2O14529 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC9.81□□□□□ -0.84
CUX2O14529 CASC19-221ENST00000641309 1382 ntBASIC9.81□□□□□ -0.84
CUX2O14529 ERG-202ENST00000398897 4651 ntTSL 5 BASIC9.81□□□□□ -0.84
CUX2O14529 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
CUX2O14529 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC9.81□□□□□ -0.84
CUX2O14529 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
CUX2O14529 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
CUX2O14529 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
CUX2O14529 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC9.81□□□□□ -0.84
CUX2O14529 ZC3H6-202ENST00000409871 11542 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
CUX2O14529 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC9.8□□□□□ -0.84
CUX2O14529 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
CUX2O14529 CC2D2A-204ENST00000503292 5175 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
CUX2O14529 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
CUX2O14529 RNA5SP30-201ENST00000365552 115 ntBASIC9.8□□□□□ -0.84
CUX2O14529 AL353625.1-202ENST00000366273 571 ntBASIC9.8□□□□□ -0.84
CUX2O14529 RNU6ATAC21P-201ENST00000408656 126 ntBASIC9.8□□□□□ -0.84
CUX2O14529 AC119751.6-201ENST00000416712 186 ntBASIC9.8□□□□□ -0.84
CUX2O14529 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC9.8□□□□□ -0.84
CUX2O14529 AC112187.1-201ENST00000455837 479 ntBASIC9.8□□□□□ -0.84
CUX2O14529 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC9.8□□□□□ -0.84
CUX2O14529 MIR3160-1-201ENST00000577972 85 ntBASIC9.8□□□□□ -0.84
CUX2O14529 AC018809.2-201ENST00000602436 3823 ntBASIC9.8□□□□□ -0.84
CUX2O14529 HIRAP1-201ENST00000605318 787 ntBASIC9.8□□□□□ -0.84
CUX2O14529 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC9.8□□□□□ -0.84
CUX2O14529 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC9.8□□□□□ -0.84
CUX2O14529 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC9.8□□□□□ -0.84
CUX2O14529 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC9.8□□□□□ -0.84
CUX2O14529 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
CUX2O14529 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC9.8□□□□□ -0.84
CUX2O14529 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC9.8□□□□□ -0.84
CUX2O14529 ASH1L-202ENST00000392403 10979 ntAPPRIS P2 TSL 5 BASIC9.8□□□□□ -0.84
CUX2O14529 AC110716.2-201ENST00000563865 3945 ntBASIC9.79□□□□□ -0.84
CUX2O14529 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
CUX2O14529 AC140479.2-201ENST00000421567 3130 ntBASIC9.79□□□□□ -0.84
CUX2O14529 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
CUX2O14529 RNA5SP123-201ENST00000363244 119 ntBASIC9.79□□□□□ -0.84
CUX2O14529 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC9.79□□□□□ -0.84
CUX2O14529 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC9.79□□□□□ -0.84
CUX2O14529 PRUNEP1-201ENST00000425846 705 ntBASIC9.79□□□□□ -0.84
CUX2O14529 CNOT7P1-201ENST00000429006 852 ntBASIC9.79□□□□□ -0.84
CUX2O14529 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
CUX2O14529 AC073264.2-201ENST00000448886 166 ntBASIC9.79□□□□□ -0.84
CUX2O14529 RPL10P17-201ENST00000453852 316 ntBASIC9.79□□□□□ -0.84
CUX2O14529 AC034236.1-201ENST00000469891 373 ntBASIC9.79□□□□□ -0.84
CUX2O14529 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC9.79□□□□□ -0.84
CUX2O14529 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC9.79□□□□□ -0.84
CUX2O14529 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC9.79□□□□□ -0.84
CUX2O14529 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC9.79□□□□□ -0.84
CUX2O14529 AC068724.3-201ENST00000625906 87 ntBASIC9.79□□□□□ -0.84
CUX2O14529 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
CUX2O14529 MGAT4A-201ENST00000264968 8432 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
CUX2O14529 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
CUX2O14529 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC9.79□□□□□ -0.84
CUX2O14529 AC105749.1-201ENST00000631338 2008 ntBASIC9.79□□□□□ -0.84
CUX2O14529 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
CUX2O14529 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
CUX2O14529 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
CUX2O14529 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
CUX2O14529 TOGARAM2-201ENST00000379558 12691 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
CUX2O14529 TNPO1P2-201ENST00000426249 2665 ntBASIC9.79□□□□□ -0.84
CUX2O14529 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
CUX2O14529 PKHD1-201ENST00000340994 11589 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
CUX2O14529 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC9.79□□□□□ -0.84
CUX2O14529 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
CUX2O14529 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
CUX2O14529 RNU1-43P-201ENST00000365052 165 ntBASIC9.79□□□□□ -0.84
CUX2O14529 RNU6ATAC34P-201ENST00000408879 121 ntBASIC9.79□□□□□ -0.84
CUX2O14529 COX6B1P1-201ENST00000415962 213 ntBASIC9.79□□□□□ -0.84
CUX2O14529 AP000547.1-201ENST00000454360 617 ntBASIC9.79□□□□□ -0.84
CUX2O14529 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC9.79□□□□□ -0.84
CUX2O14529 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC9.79□□□□□ -0.84
CUX2O14529 AC073610.1-201ENST00000489971 396 ntBASIC9.79□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms