Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 PCA3_2.1-201ENST00000612507 409 ntBASIC5.97□□□□□ -1.45
TCRBV7S3A2A0A539 uc_338.31-201ENST00000615595 186 ntBASIC5.97□□□□□ -1.45
TCRBV7S3A2A0A539 MIR6721-201ENST00000617181 87 ntBASIC5.97□□□□□ -1.45
TCRBV7S3A2A0A539 AL445670.1-201ENST00000618889 801 ntBASIC5.97□□□□□ -1.45
TCRBV7S3A2A0A539 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.97□□□□□ -1.45
TCRBV7S3A2A0A539 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC5.97□□□□□ -1.45
TCRBV7S3A2A0A539 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.97□□□□□ -1.45
TCRBV7S3A2A0A539 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
TCRBV7S3A2A0A539 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
TCRBV7S3A2A0A539 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.97□□□□□ -1.45
TCRBV7S3A2A0A539 AC025470.1-201ENST00000510053 2032 ntBASIC5.97□□□□□ -1.45
TCRBV7S3A2A0A539 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
TCRBV7S3A2A0A539 RBPJP7-201ENST00000442803 1447 ntBASIC5.97□□□□□ -1.45
TCRBV7S3A2A0A539 RBPJP5-201ENST00000449433 1447 ntBASIC5.97□□□□□ -1.45
TCRBV7S3A2A0A539 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.97□□□□□ -1.45
TCRBV7S3A2A0A539 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
TCRBV7S3A2A0A539 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
TCRBV7S3A2A0A539 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC5.97□□□□□ -1.45
TCRBV7S3A2A0A539 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
TCRBV7S3A2A0A539 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.97□□□□□ -1.45
TCRBV7S3A2A0A539 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
TCRBV7S3A2A0A539 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
TCRBV7S3A2A0A539 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
TCRBV7S3A2A0A539 WDR95P-201ENST00000425638 1542 ntBASIC5.96□□□□□ -1.46
TCRBV7S3A2A0A539 MANSC1-204ENST00000545735 1501 ntTSL 2 BASIC5.96□□□□□ -1.46
TCRBV7S3A2A0A539 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
TCRBV7S3A2A0A539 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC5.96□□□□□ -1.46
TCRBV7S3A2A0A539 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
TCRBV7S3A2A0A539 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
TCRBV7S3A2A0A539 MIR191-201ENST00000384873 92 ntBASIC5.96□□□□□ -1.46
TCRBV7S3A2A0A539 MIR130B-202ENST00000385018 82 ntBASIC5.96□□□□□ -1.46
TCRBV7S3A2A0A539 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.96□□□□□ -1.46
TCRBV7S3A2A0A539 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.96□□□□□ -1.46
TCRBV7S3A2A0A539 ELOCP6-201ENST00000429066 328 ntBASIC5.96□□□□□ -1.46
TCRBV7S3A2A0A539 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC5.96□□□□□ -1.46
TCRBV7S3A2A0A539 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
TCRBV7S3A2A0A539 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.96□□□□□ -1.46
TCRBV7S3A2A0A539 TXNP2-201ENST00000443918 295 ntBASIC5.96□□□□□ -1.46
TCRBV7S3A2A0A539 GXYLT1P1-201ENST00000446657 490 ntBASIC5.96□□□□□ -1.46
TCRBV7S3A2A0A539 KF459542.1-201ENST00000450908 553 ntBASIC5.96□□□□□ -1.46
TCRBV7S3A2A0A539 ELOCP12-201ENST00000458706 328 ntBASIC5.96□□□□□ -1.46
TCRBV7S3A2A0A539 AC023245.1-201ENST00000468501 517 ntBASIC5.96□□□□□ -1.46
TCRBV7S3A2A0A539 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
TCRBV7S3A2A0A539 PDCL3P4-201ENST00000489621 720 ntBASIC5.96□□□□□ -1.46
TCRBV7S3A2A0A539 RPS27P20-201ENST00000492051 246 ntBASIC5.96□□□□□ -1.46
TCRBV7S3A2A0A539 RN7SL362P-201ENST00000494228 267 ntBASIC5.96□□□□□ -1.46
TCRBV7S3A2A0A539 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.46
TCRBV7S3A2A0A539 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.96□□□□□ -1.46
TCRBV7S3A2A0A539 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC5.96□□□□□ -1.46
TCRBV7S3A2A0A539 IGKV3D-25-201ENST00000519599 235 ntBASIC5.96□□□□□ -1.46
TCRBV7S3A2A0A539 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.96□□□□□ -1.46
TCRBV7S3A2A0A539 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.96□□□□□ -1.46
TCRBV7S3A2A0A539 BTG1P1-201ENST00000540396 508 ntBASIC5.96□□□□□ -1.46
TCRBV7S3A2A0A539 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.96□□□□□ -1.46
TCRBV7S3A2A0A539 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.96□□□□□ -1.46
TCRBV7S3A2A0A539 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC5.96□□□□□ -1.46
TCRBV7S3A2A0A539 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
TCRBV7S3A2A0A539 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC5.96□□□□□ -1.46
TCRBV7S3A2A0A539 PPATP2-201ENST00000605635 508 ntBASIC5.96□□□□□ -1.46
TCRBV7S3A2A0A539 AC092681.3-201ENST00000609463 678 ntBASIC5.96□□□□□ -1.46
TCRBV7S3A2A0A539 AL352984.2-201ENST00000611153 546 ntBASIC5.96□□□□□ -1.46
TCRBV7S3A2A0A539 HTR1DP1-201ENST00000616500 888 ntBASIC5.96□□□□□ -1.46
TCRBV7S3A2A0A539 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.96□□□□□ -1.46
TCRBV7S3A2A0A539 AL136228.1-201ENST00000622221 319 ntBASIC5.96□□□□□ -1.46
TCRBV7S3A2A0A539 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC5.96□□□□□ -1.46
TCRBV7S3A2A0A539 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
TCRBV7S3A2A0A539 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.96□□□□□ -1.46
TCRBV7S3A2A0A539 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
TCRBV7S3A2A0A539 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
TCRBV7S3A2A0A539 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
TCRBV7S3A2A0A539 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
TCRBV7S3A2A0A539 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
TCRBV7S3A2A0A539 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
TCRBV7S3A2A0A539 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
TCRBV7S3A2A0A539 AP004607.3-201ENST00000530354 3915 ntBASIC5.95□□□□□ -1.46
TCRBV7S3A2A0A539 AC139426.3-201ENST00000605648 2059 ntBASIC5.95□□□□□ -1.46
TCRBV7S3A2A0A539 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.95□□□□□ -1.46
TCRBV7S3A2A0A539 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TCRBV7S3A2A0A539 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC5.95□□□□□ -1.46
TCRBV7S3A2A0A539 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TCRBV7S3A2A0A539 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TCRBV7S3A2A0A539 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
TCRBV7S3A2A0A539 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TCRBV7S3A2A0A539 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
TCRBV7S3A2A0A539 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TCRBV7S3A2A0A539 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
TCRBV7S3A2A0A539 GCNT1P4-201ENST00000404096 329 ntBASIC5.95□□□□□ -1.46
TCRBV7S3A2A0A539 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.95□□□□□ -1.46
TCRBV7S3A2A0A539 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC5.95□□□□□ -1.46
TCRBV7S3A2A0A539 THEM7P-201ENST00000419556 672 ntBASIC5.95□□□□□ -1.46
TCRBV7S3A2A0A539 AC023141.6-201ENST00000429418 337 ntBASIC5.95□□□□□ -1.46
TCRBV7S3A2A0A539 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TCRBV7S3A2A0A539 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.95□□□□□ -1.46
TCRBV7S3A2A0A539 GAPDHP75-201ENST00000433910 943 ntBASIC5.95□□□□□ -1.46
TCRBV7S3A2A0A539 GAPDHP48-201ENST00000436626 961 ntBASIC5.95□□□□□ -1.46
TCRBV7S3A2A0A539 BMS1P10-201ENST00000443754 1120 ntBASIC5.95□□□□□ -1.46
TCRBV7S3A2A0A539 MTND2P25-201ENST00000449028 610 ntBASIC5.95□□□□□ -1.46
TCRBV7S3A2A0A539 CEACAMP11-201ENST00000455211 583 ntBASIC5.95□□□□□ -1.46
TCRBV7S3A2A0A539 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
TCRBV7S3A2A0A539 AC140134.1-201ENST00000511830 3544 ntBASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms