Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AC025768.1-201ENST00000510057 267 ntBASIC6.75□□□□□ -1.33
COL20A1Q9P218 AC108157.1-201ENST00000510511 539 ntBASIC6.75□□□□□ -1.33
COL20A1Q9P218 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC6.75□□□□□ -1.33
COL20A1Q9P218 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC6.75□□□□□ -1.33
COL20A1Q9P218 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC6.75□□□□□ -1.33
COL20A1Q9P218 AC079600.1-201ENST00000550326 297 ntBASIC6.75□□□□□ -1.33
COL20A1Q9P218 AC074029.2-201ENST00000551045 634 ntBASIC6.75□□□□□ -1.33
COL20A1Q9P218 AC091078.2-201ENST00000557145 559 ntBASIC6.75□□□□□ -1.33
COL20A1Q9P218 TXNP4-201ENST00000575018 310 ntBASIC6.75□□□□□ -1.33
COL20A1Q9P218 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC6.75□□□□□ -1.33
COL20A1Q9P218 AC026790.2-201ENST00000606282 430 ntBASIC6.75□□□□□ -1.33
COL20A1Q9P218 RN7SL787P-201ENST00000613000 284 ntBASIC6.75□□□□□ -1.33
COL20A1Q9P218 AP001885.1-201ENST00000621658 558 ntBASIC6.75□□□□□ -1.33
COL20A1Q9P218 AC022919.1-201ENST00000624979 626 ntBASIC6.75□□□□□ -1.33
COL20A1Q9P218 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.75□□□□□ -1.33
COL20A1Q9P218 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC6.75□□□□□ -1.33
COL20A1Q9P218 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC6.75□□□□□ -1.33
COL20A1Q9P218 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
COL20A1Q9P218 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
COL20A1Q9P218 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
COL20A1Q9P218 DOCK11P1-201ENST00000553480 5932 ntBASIC6.75□□□□□ -1.33
COL20A1Q9P218 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.75□□□□□ -1.33
COL20A1Q9P218 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.75□□□□□ -1.33
COL20A1Q9P218 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
COL20A1Q9P218 CNOT6LP1-201ENST00000559681 1462 ntBASIC6.74□□□□□ -1.33
COL20A1Q9P218 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC6.74□□□□□ -1.33
COL20A1Q9P218 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
COL20A1Q9P218 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
COL20A1Q9P218 AC116036.1-201ENST00000412199 367 ntBASIC6.74□□□□□ -1.33
COL20A1Q9P218 AC079355.1-201ENST00000421770 223 ntBASIC6.74□□□□□ -1.33
COL20A1Q9P218 HSFY1P1-201ENST00000423928 1178 ntBASIC6.74□□□□□ -1.33
COL20A1Q9P218 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.74□□□□□ -1.33
COL20A1Q9P218 AC099677.3-201ENST00000427081 395 ntBASIC6.74□□□□□ -1.33
COL20A1Q9P218 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC6.74□□□□□ -1.33
COL20A1Q9P218 AC126120.1-201ENST00000431082 470 ntBASIC6.74□□□□□ -1.33
COL20A1Q9P218 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC6.74□□□□□ -1.33
COL20A1Q9P218 AC079922.1-201ENST00000443291 359 ntBASIC6.74□□□□□ -1.33
COL20A1Q9P218 AC023141.9-201ENST00000458734 412 ntBASIC6.74□□□□□ -1.33
COL20A1Q9P218 AC016687.1-201ENST00000482574 353 ntBASIC6.74□□□□□ -1.33
COL20A1Q9P218 AC124945.1-201ENST00000485133 188 ntBASIC6.74□□□□□ -1.33
COL20A1Q9P218 RPL23AP40-201ENST00000487630 390 ntBASIC6.74□□□□□ -1.33
COL20A1Q9P218 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC6.74□□□□□ -1.33
COL20A1Q9P218 RN7SL284P-201ENST00000498823 275 ntBASIC6.74□□□□□ -1.33
COL20A1Q9P218 RNU6-1334P-201ENST00000516032 105 ntBASIC6.74□□□□□ -1.33
COL20A1Q9P218 SEC11B-201ENST00000518383 499 ntBASIC6.74□□□□□ -1.33
COL20A1Q9P218 HMGN2P36-201ENST00000529541 409 ntBASIC6.74□□□□□ -1.33
COL20A1Q9P218 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC6.74□□□□□ -1.33
COL20A1Q9P218 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.74□□□□□ -1.33
COL20A1Q9P218 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
COL20A1Q9P218 LINC00216-201ENST00000623548 1126 ntBASIC6.74□□□□□ -1.33
COL20A1Q9P218 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC6.74□□□□□ -1.33
COL20A1Q9P218 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC6.74□□□□□ -1.33
COL20A1Q9P218 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
COL20A1Q9P218 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.74□□□□□ -1.33
COL20A1Q9P218 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.74□□□□□ -1.33
COL20A1Q9P218 AP001002.1-201ENST00000625148 1513 ntBASIC6.74□□□□□ -1.33
COL20A1Q9P218 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
COL20A1Q9P218 AP000866.6-201ENST00000638898 3579 ntBASIC6.74□□□□□ -1.33
COL20A1Q9P218 CDY11P-201ENST00000447168 1651 ntBASIC6.74□□□□□ -1.33
COL20A1Q9P218 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC6.74□□□□□ -1.33
COL20A1Q9P218 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
COL20A1Q9P218 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
COL20A1Q9P218 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
COL20A1Q9P218 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
COL20A1Q9P218 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
COL20A1Q9P218 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
COL20A1Q9P218 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
COL20A1Q9P218 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
COL20A1Q9P218 AC006511.3-201ENST00000624929 1783 ntBASIC6.73□□□□□ -1.33
COL20A1Q9P218 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
COL20A1Q9P218 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
COL20A1Q9P218 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
COL20A1Q9P218 MIR375-201ENST00000362103 64 ntBASIC6.73□□□□□ -1.33
COL20A1Q9P218 SNORA51.1-201ENST00000363243 140 ntBASIC6.73□□□□□ -1.33
COL20A1Q9P218 RNU6-1331P-201ENST00000363658 106 ntBASIC6.73□□□□□ -1.33
COL20A1Q9P218 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC6.73□□□□□ -1.33
COL20A1Q9P218 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
COL20A1Q9P218 RPS3AP2-201ENST00000407190 754 ntBASIC6.73□□□□□ -1.33
COL20A1Q9P218 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC6.73□□□□□ -1.33
COL20A1Q9P218 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC6.73□□□□□ -1.33
COL20A1Q9P218 MTND2P9-201ENST00000422293 931 ntBASIC6.73□□□□□ -1.33
COL20A1Q9P218 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.73□□□□□ -1.33
COL20A1Q9P218 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC6.73□□□□□ -1.33
COL20A1Q9P218 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.73□□□□□ -1.33
COL20A1Q9P218 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.73□□□□□ -1.33
COL20A1Q9P218 ACA64.4-201ENST00000459070 127 ntBASIC6.73□□□□□ -1.33
COL20A1Q9P218 RPS23P6-201ENST00000466136 431 ntBASIC6.73□□□□□ -1.33
COL20A1Q9P218 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC6.73□□□□□ -1.33
COL20A1Q9P218 AC011411.1-201ENST00000509592 876 ntBASIC6.73□□□□□ -1.33
COL20A1Q9P218 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.73□□□□□ -1.33
COL20A1Q9P218 SNORA70.20-201ENST00000516848 126 ntBASIC6.73□□□□□ -1.33
COL20A1Q9P218 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC6.73□□□□□ -1.33
COL20A1Q9P218 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC6.73□□□□□ -1.33
COL20A1Q9P218 MYL6-213ENST00000549017 502 ntTSL 3 BASIC6.73□□□□□ -1.33
COL20A1Q9P218 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC6.73□□□□□ -1.33
COL20A1Q9P218 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC6.73□□□□□ -1.33
COL20A1Q9P218 GARSP1-201ENST00000570895 719 ntBASIC6.73□□□□□ -1.33
COL20A1Q9P218 SNORD95-201ENST00000579879 68 ntBASIC6.73□□□□□ -1.33
COL20A1Q9P218 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC6.73□□□□□ -1.33
COL20A1Q9P218 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms