Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SIX2Q9NPC8 RPS3AP15-201ENST00000483874 781 ntBASIC6.09□□□□□ -1.43
SIX2Q9NPC8 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC6.09□□□□□ -1.43
SIX2Q9NPC8 NENFP3-201ENST00000503735 313 ntBASIC6.09□□□□□ -1.43
SIX2Q9NPC8 GLUD1P3-202ENST00000508551 200 ntBASIC6.09□□□□□ -1.43
SIX2Q9NPC8 AC111000.6-201ENST00000514471 709 ntBASIC6.09□□□□□ -1.43
SIX2Q9NPC8 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC6.09□□□□□ -1.43
SIX2Q9NPC8 AC107958.1-201ENST00000556576 290 ntBASIC6.09□□□□□ -1.43
SIX2Q9NPC8 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC6.09□□□□□ -1.43
SIX2Q9NPC8 AC015802.2-201ENST00000589690 189 ntBASIC6.09□□□□□ -1.43
SIX2Q9NPC8 AC108865.2-201ENST00000606881 432 ntBASIC6.09□□□□□ -1.43
SIX2Q9NPC8 AP005431.1-201ENST00000618479 319 ntBASIC6.09□□□□□ -1.43
SIX2Q9NPC8 AC002044.3-201ENST00000623314 541 ntBASIC6.09□□□□□ -1.43
SIX2Q9NPC8 NEK3-211ENST00000629912 141 ntTSL 5 BASIC6.09□□□□□ -1.43
SIX2Q9NPC8 OR8G3P-202ENST00000641572 1255 ntBASIC6.09□□□□□ -1.43
SIX2Q9NPC8 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SIX2Q9NPC8 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SIX2Q9NPC8 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SIX2Q9NPC8 CASC19-260ENST00000641828 2001 ntBASIC6.09□□□□□ -1.43
SIX2Q9NPC8 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SIX2Q9NPC8 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC6.09□□□□□ -1.44
SIX2Q9NPC8 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.44
SIX2Q9NPC8 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.09□□□□□ -1.44
SIX2Q9NPC8 AC016745.2-201ENST00000608834 3443 ntBASIC6.09□□□□□ -1.44
SIX2Q9NPC8 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.09□□□□□ -1.44
SIX2Q9NPC8 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC6.08□□□□□ -1.44
SIX2Q9NPC8 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC6.08□□□□□ -1.44
SIX2Q9NPC8 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.08□□□□□ -1.44
SIX2Q9NPC8 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SIX2Q9NPC8 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SIX2Q9NPC8 OR4F13P-202ENST00000560066 2054 ntBASIC6.08□□□□□ -1.44
SIX2Q9NPC8 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.08□□□□□ -1.44
SIX2Q9NPC8 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
SIX2Q9NPC8 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
SIX2Q9NPC8 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.08□□□□□ -1.44
SIX2Q9NPC8 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SIX2Q9NPC8 RNA5SP433-201ENST00000364491 114 ntBASIC6.08□□□□□ -1.44
SIX2Q9NPC8 LYPLA1P3-201ENST00000402650 695 ntBASIC6.08□□□□□ -1.44
SIX2Q9NPC8 LSM5-203ENST00000409782 649 ntTSL 5 BASIC6.08□□□□□ -1.44
SIX2Q9NPC8 RNF10P1-201ENST00000418589 369 ntBASIC6.08□□□□□ -1.44
SIX2Q9NPC8 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC6.08□□□□□ -1.44
SIX2Q9NPC8 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC6.08□□□□□ -1.44
SIX2Q9NPC8 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
SIX2Q9NPC8 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC6.08□□□□□ -1.44
SIX2Q9NPC8 HMGB3P24-201ENST00000433260 622 ntBASIC6.08□□□□□ -1.44
SIX2Q9NPC8 MTND2P40-201ENST00000436718 841 ntBASIC6.08□□□□□ -1.44
SIX2Q9NPC8 DNAJA1P5-201ENST00000440278 943 ntBASIC6.08□□□□□ -1.44
SIX2Q9NPC8 LINC02210-201ENST00000444561 288 ntBASIC6.08□□□□□ -1.44
SIX2Q9NPC8 AL596266.1-201ENST00000448132 400 ntBASIC6.08□□□□□ -1.44
SIX2Q9NPC8 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC6.08□□□□□ -1.44
SIX2Q9NPC8 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC6.08□□□□□ -1.44
SIX2Q9NPC8 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SIX2Q9NPC8 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC6.08□□□□□ -1.44
SIX2Q9NPC8 AC006499.4-201ENST00000510947 694 ntBASIC6.08□□□□□ -1.44
SIX2Q9NPC8 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC6.08□□□□□ -1.44
SIX2Q9NPC8 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC6.08□□□□□ -1.44
SIX2Q9NPC8 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC6.08□□□□□ -1.44
SIX2Q9NPC8 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC6.08□□□□□ -1.44
SIX2Q9NPC8 AC022784.5-201ENST00000522241 437 ntBASIC6.08□□□□□ -1.44
SIX2Q9NPC8 MRPS16P1-201ENST00000523462 412 ntBASIC6.08□□□□□ -1.44
SIX2Q9NPC8 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC6.08□□□□□ -1.44
SIX2Q9NPC8 AC122688.1-201ENST00000541494 223 ntBASIC6.08□□□□□ -1.44
SIX2Q9NPC8 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC6.08□□□□□ -1.44
SIX2Q9NPC8 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC6.08□□□□□ -1.44
SIX2Q9NPC8 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC6.08□□□□□ -1.44
SIX2Q9NPC8 AC025262.3-201ENST00000623666 360 ntBASIC6.08□□□□□ -1.44
SIX2Q9NPC8 AC129915.3-201ENST00000634128 948 ntBASIC6.08□□□□□ -1.44
SIX2Q9NPC8 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SIX2Q9NPC8 MRE11P1-201ENST00000464884 2127 ntBASIC6.08□□□□□ -1.44
SIX2Q9NPC8 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC6.08□□□□□ -1.44
SIX2Q9NPC8 CCAT2-201ENST00000630920 1752 ntBASIC6.08□□□□□ -1.44
SIX2Q9NPC8 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SIX2Q9NPC8 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.08□□□□□ -1.44
SIX2Q9NPC8 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SIX2Q9NPC8 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC6.08□□□□□ -1.44
SIX2Q9NPC8 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC6.07□□□□□ -1.44
SIX2Q9NPC8 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SIX2Q9NPC8 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SIX2Q9NPC8 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SIX2Q9NPC8 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SIX2Q9NPC8 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SIX2Q9NPC8 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC6.07□□□□□ -1.44
SIX2Q9NPC8 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SIX2Q9NPC8 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.07□□□□□ -1.44
SIX2Q9NPC8 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SIX2Q9NPC8 RN7SKP145-201ENST00000363291 303 ntBASIC6.07□□□□□ -1.44
SIX2Q9NPC8 RNA5SP514-201ENST00000363717 111 ntBASIC6.07□□□□□ -1.44
SIX2Q9NPC8 CDC123-202ENST00000378900 933 ntTSL 5 BASIC6.07□□□□□ -1.44
SIX2Q9NPC8 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC6.07□□□□□ -1.44
SIX2Q9NPC8 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC6.07□□□□□ -1.44
SIX2Q9NPC8 TMEM183AP1-205ENST00000432739 290 ntBASIC6.07□□□□□ -1.44
SIX2Q9NPC8 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC6.07□□□□□ -1.44
SIX2Q9NPC8 RN7SL168P-201ENST00000463821 279 ntBASIC6.07□□□□□ -1.44
SIX2Q9NPC8 AC128716.1-201ENST00000475129 166 ntBASIC6.07□□□□□ -1.44
SIX2Q9NPC8 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC6.07□□□□□ -1.44
SIX2Q9NPC8 SEPT10P1-201ENST00000517342 1162 ntBASIC6.07□□□□□ -1.44
SIX2Q9NPC8 AC005363.1-201ENST00000530779 351 ntBASIC6.07□□□□□ -1.44
SIX2Q9NPC8 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC6.07□□□□□ -1.44
SIX2Q9NPC8 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC6.07□□□□□ -1.44
SIX2Q9NPC8 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms