Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 snoZ40.1-201ENST00000364540 72 ntBASIC6.94□□□□□ -1.3
SSU72Q9NP77 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC6.94□□□□□ -1.3
SSU72Q9NP77 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC6.94□□□□□ -1.3
SSU72Q9NP77 VAV3-203ENST00000415432 1293 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SSU72Q9NP77 DNAJA1P2-201ENST00000421360 1197 ntBASIC6.94□□□□□ -1.3
SSU72Q9NP77 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC6.94□□□□□ -1.3
SSU72Q9NP77 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC6.94□□□□□ -1.3
SSU72Q9NP77 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC6.94□□□□□ -1.3
SSU72Q9NP77 Z99758.1-201ENST00000432081 368 ntTSL 3 BASIC6.94□□□□□ -1.3
SSU72Q9NP77 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC6.94□□□□□ -1.3
SSU72Q9NP77 EMC3-AS1-205ENST00000438698 534 ntBASIC6.94□□□□□ -1.3
SSU72Q9NP77 AC009263.1-201ENST00000441193 1239 ntBASIC6.94□□□□□ -1.3
SSU72Q9NP77 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC6.94□□□□□ -1.3
SSU72Q9NP77 HMGB1P5-202ENST00000451497 985 ntBASIC6.94□□□□□ -1.3
SSU72Q9NP77 RPL35AP19-201ENST00000469425 329 ntBASIC6.94□□□□□ -1.3
SSU72Q9NP77 RN7SL520P-201ENST00000474110 286 ntBASIC6.94□□□□□ -1.3
SSU72Q9NP77 RN7SL563P-201ENST00000481233 298 ntBASIC6.94□□□□□ -1.3
SSU72Q9NP77 RN7SL561P-201ENST00000488553 281 ntBASIC6.94□□□□□ -1.3
SSU72Q9NP77 AC021006.1-201ENST00000489849 553 ntBASIC6.94□□□□□ -1.3
SSU72Q9NP77 RN7SL306P-201ENST00000492941 296 ntBASIC6.94□□□□□ -1.3
SSU72Q9NP77 H3F3AP3-201ENST00000497682 407 ntBASIC6.94□□□□□ -1.3
SSU72Q9NP77 AC105391.1-201ENST00000503155 1045 ntBASIC6.94□□□□□ -1.3
SSU72Q9NP77 RPL37P25-201ENST00000507308 276 ntBASIC6.94□□□□□ -1.3
SSU72Q9NP77 AC005699.1-203ENST00000515286 688 ntTSL 3 BASIC6.94□□□□□ -1.3
SSU72Q9NP77 LINC01944-201ENST00000517916 416 ntTSL 3 BASIC6.94□□□□□ -1.3
SSU72Q9NP77 TBCA-206ENST00000518338 551 ntTSL 2 BASIC6.94□□□□□ -1.3
SSU72Q9NP77 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC6.94□□□□□ -1.3
SSU72Q9NP77 KCTD9P4-201ENST00000526766 1166 ntBASIC6.94□□□□□ -1.3
SSU72Q9NP77 AC109635.3-201ENST00000529536 185 ntBASIC6.94□□□□□ -1.3
SSU72Q9NP77 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SSU72Q9NP77 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC6.94□□□□□ -1.3
SSU72Q9NP77 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC6.94□□□□□ -1.3
SSU72Q9NP77 CYP4A26P-201ENST00000563017 196 ntBASIC6.94□□□□□ -1.3
SSU72Q9NP77 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC6.94□□□□□ -1.3
SSU72Q9NP77 ROCK1P1-201ENST00000573767 549 ntBASIC6.94□□□□□ -1.3
SSU72Q9NP77 MTND1P15-201ENST00000579262 949 ntBASIC6.94□□□□□ -1.3
SSU72Q9NP77 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC6.94□□□□□ -1.3
SSU72Q9NP77 MIR5192-201ENST00000579892 92 ntBASIC6.94□□□□□ -1.3
SSU72Q9NP77 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC6.94□□□□□ -1.3
SSU72Q9NP77 AC128687.1-201ENST00000605304 619 ntBASIC6.94□□□□□ -1.3
SSU72Q9NP77 AP002360.3-201ENST00000607673 710 ntBASIC6.94□□□□□ -1.3
SSU72Q9NP77 AL451074.6-201ENST00000608512 729 ntBASIC6.94□□□□□ -1.3
SSU72Q9NP77 AC008498.1-201ENST00000613012 531 ntBASIC6.94□□□□□ -1.3
SSU72Q9NP77 AC026468.1-201ENST00000614981 107 ntBASIC6.94□□□□□ -1.3
SSU72Q9NP77 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.94□□□□□ -1.3
SSU72Q9NP77 AC016769.4-201ENST00000616893 535 ntBASIC6.94□□□□□ -1.3
SSU72Q9NP77 AL353898.2-201ENST00000623000 255 ntBASIC6.94□□□□□ -1.3
SSU72Q9NP77 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC6.94□□□□□ -1.3
SSU72Q9NP77 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC6.94□□□□□ -1.3
SSU72Q9NP77 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC6.94□□□□□ -1.3
SSU72Q9NP77 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SSU72Q9NP77 AC093278.2-201ENST00000564956 2485 ntBASIC6.94□□□□□ -1.3
SSU72Q9NP77 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC6.94□□□□□ -1.3
SSU72Q9NP77 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SSU72Q9NP77 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SSU72Q9NP77 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SSU72Q9NP77 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
SSU72Q9NP77 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SSU72Q9NP77 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SSU72Q9NP77 ADA2-203ENST00000399837 4505 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
SSU72Q9NP77 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SSU72Q9NP77 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SSU72Q9NP77 NEPNP-201ENST00000404786 1371 ntBASIC6.94□□□□□ -1.3
SSU72Q9NP77 MTND4P29-201ENST00000503122 1372 ntBASIC6.94□□□□□ -1.3
SSU72Q9NP77 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
SSU72Q9NP77 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SSU72Q9NP77 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SSU72Q9NP77 AL359195.2-201ENST00000623657 4412 ntBASIC6.94□□□□□ -1.3
SSU72Q9NP77 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SSU72Q9NP77 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
SSU72Q9NP77 AC125232.1-201ENST00000452554 1408 ntBASIC6.93□□□□□ -1.3
SSU72Q9NP77 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
SSU72Q9NP77 AL355852.1-201ENST00000454081 1771 ntBASIC6.93□□□□□ -1.3
SSU72Q9NP77 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
SSU72Q9NP77 API5P1-201ENST00000424316 1510 ntBASIC6.93□□□□□ -1.3
SSU72Q9NP77 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC6.93□□□□□ -1.3
SSU72Q9NP77 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC6.93□□□□□ -1.3
SSU72Q9NP77 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SSU72Q9NP77 STAG3L4-201ENST00000352103 530 ntBASIC6.93□□□□□ -1.3
SSU72Q9NP77 AC104699.1-201ENST00000352271 414 ntTSL 3 BASIC6.93□□□□□ -1.3
SSU72Q9NP77 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SSU72Q9NP77 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SSU72Q9NP77 FABP9-201ENST00000379071 497 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
SSU72Q9NP77 IGLJ2-201ENST00000390322 175 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
SSU72Q9NP77 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.93□□□□□ -1.3
SSU72Q9NP77 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SSU72Q9NP77 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC6.93□□□□□ -1.3
SSU72Q9NP77 RPSAP1-201ENST00000421328 880 ntBASIC6.93□□□□□ -1.3
SSU72Q9NP77 HCG25-217ENST00000422366 702 ntTSL 3 BASIC6.93□□□□□ -1.3
SSU72Q9NP77 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC6.93□□□□□ -1.3
SSU72Q9NP77 HNRNPA1P57-201ENST00000431359 530 ntTSL 4 BASIC6.93□□□□□ -1.3
SSU72Q9NP77 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC6.93□□□□□ -1.3
SSU72Q9NP77 LSM3P3-201ENST00000436601 306 ntBASIC6.93□□□□□ -1.3
SSU72Q9NP77 LINC01508-202ENST00000436671 755 ntTSL 3 BASIC6.93□□□□□ -1.3
SSU72Q9NP77 AL137027.1-201ENST00000440358 444 ntTSL 2 BASIC6.93□□□□□ -1.3
SSU72Q9NP77 MTND3P1-201ENST00000441336 220 ntBASIC6.93□□□□□ -1.3
SSU72Q9NP77 CRYGGP-201ENST00000443337 145 ntBASIC6.93□□□□□ -1.3
SSU72Q9NP77 WDR82P2-201ENST00000444540 928 ntBASIC6.93□□□□□ -1.3
SSU72Q9NP77 AL161646.1-201ENST00000447860 1013 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SSU72Q9NP77 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC6.93□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms