Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 LYARP1-201ENST00000436977 1501 ntBASIC6.06□□□□□ -1.44
PCDH9Q9HC56 AC099654.3-201ENST00000447087 1546 ntBASIC6.06□□□□□ -1.44
PCDH9Q9HC56 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PCDH9Q9HC56 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
PCDH9Q9HC56 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PCDH9Q9HC56 SNRPEP6-201ENST00000407465 277 ntBASIC6.06□□□□□ -1.44
PCDH9Q9HC56 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC6.06□□□□□ -1.44
PCDH9Q9HC56 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC6.06□□□□□ -1.44
PCDH9Q9HC56 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PCDH9Q9HC56 AC069154.1-201ENST00000432914 542 ntBASIC6.06□□□□□ -1.44
PCDH9Q9HC56 AL445928.1-201ENST00000435545 222 ntBASIC6.06□□□□□ -1.44
PCDH9Q9HC56 RPS12P17-201ENST00000438591 377 ntBASIC6.06□□□□□ -1.44
PCDH9Q9HC56 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
PCDH9Q9HC56 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC6.06□□□□□ -1.44
PCDH9Q9HC56 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC6.06□□□□□ -1.44
PCDH9Q9HC56 AC017099.1-201ENST00000448261 1028 ntBASIC6.06□□□□□ -1.44
PCDH9Q9HC56 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC6.06□□□□□ -1.44
PCDH9Q9HC56 Z83838.1-202ENST00000456225 839 ntBASIC6.06□□□□□ -1.44
PCDH9Q9HC56 AP002884.1-201ENST00000479691 655 ntBASIC6.06□□□□□ -1.44
PCDH9Q9HC56 OR52A4P-202ENST00000481634 799 ntBASIC6.06□□□□□ -1.44
PCDH9Q9HC56 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC6.06□□□□□ -1.44
PCDH9Q9HC56 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC6.06□□□□□ -1.44
PCDH9Q9HC56 AC113398.2-201ENST00000507630 558 ntBASIC6.06□□□□□ -1.44
PCDH9Q9HC56 AP003168.1-201ENST00000530091 307 ntBASIC6.06□□□□□ -1.44
PCDH9Q9HC56 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC6.06□□□□□ -1.44
PCDH9Q9HC56 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC6.06□□□□□ -1.44
PCDH9Q9HC56 CYCSP38-201ENST00000559840 322 ntBASIC6.06□□□□□ -1.44
PCDH9Q9HC56 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.06□□□□□ -1.44
PCDH9Q9HC56 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC6.06□□□□□ -1.44
PCDH9Q9HC56 AP005119.1-201ENST00000580956 292 ntBASIC6.06□□□□□ -1.44
PCDH9Q9HC56 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.06□□□□□ -1.44
PCDH9Q9HC56 AC016911.1-201ENST00000613297 452 ntBASIC6.06□□□□□ -1.44
PCDH9Q9HC56 AL354696.1-201ENST00000614652 497 ntBASIC6.06□□□□□ -1.44
PCDH9Q9HC56 AC096708.4-201ENST00000620563 552 ntBASIC6.06□□□□□ -1.44
PCDH9Q9HC56 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC6.06□□□□□ -1.44
PCDH9Q9HC56 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PCDH9Q9HC56 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC6.06□□□□□ -1.44
PCDH9Q9HC56 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
PCDH9Q9HC56 RBPJP7-201ENST00000442803 1447 ntBASIC6.06□□□□□ -1.44
PCDH9Q9HC56 OFD1P8Y-201ENST00000449148 1433 ntBASIC6.06□□□□□ -1.44
PCDH9Q9HC56 RBPJP5-201ENST00000449433 1447 ntBASIC6.06□□□□□ -1.44
PCDH9Q9HC56 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
PCDH9Q9HC56 AC009962.1-201ENST00000567327 3813 ntBASIC6.06□□□□□ -1.44
PCDH9Q9HC56 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PCDH9Q9HC56 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PCDH9Q9HC56 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PCDH9Q9HC56 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PCDH9Q9HC56 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PCDH9Q9HC56 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PCDH9Q9HC56 FBXL21-201ENST00000297158 1305 ntBASIC6.05□□□□□ -1.44
PCDH9Q9HC56 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
PCDH9Q9HC56 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC6.05□□□□□ -1.44
PCDH9Q9HC56 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PCDH9Q9HC56 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PCDH9Q9HC56 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
PCDH9Q9HC56 RN7SKP78-201ENST00000364711 318 ntBASIC6.05□□□□□ -1.44
PCDH9Q9HC56 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
PCDH9Q9HC56 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC6.05□□□□□ -1.44
PCDH9Q9HC56 FGF12-202ENST00000430714 603 ntTSL 2 BASIC6.05□□□□□ -1.44
PCDH9Q9HC56 FTO-202ENST00000431610 707 ntTSL 3 BASIC6.05□□□□□ -1.44
PCDH9Q9HC56 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.05□□□□□ -1.44
PCDH9Q9HC56 AC242426.1-201ENST00000435270 960 ntBASIC6.05□□□□□ -1.44
PCDH9Q9HC56 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
PCDH9Q9HC56 NDUFA5P8-201ENST00000449019 346 ntBASIC6.05□□□□□ -1.44
PCDH9Q9HC56 AC005077.1-201ENST00000449226 375 ntBASIC6.05□□□□□ -1.44
PCDH9Q9HC56 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC6.05□□□□□ -1.44
PCDH9Q9HC56 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC6.05□□□□□ -1.44
PCDH9Q9HC56 AC006539.1-201ENST00000481419 501 ntBASIC6.05□□□□□ -1.44
PCDH9Q9HC56 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC6.05□□□□□ -1.44
PCDH9Q9HC56 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.05□□□□□ -1.44
PCDH9Q9HC56 AC008629.2-201ENST00000503783 483 ntBASIC6.05□□□□□ -1.44
PCDH9Q9HC56 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.05□□□□□ -1.44
PCDH9Q9HC56 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC6.05□□□□□ -1.44
PCDH9Q9HC56 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC6.05□□□□□ -1.44
PCDH9Q9HC56 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.05□□□□□ -1.44
PCDH9Q9HC56 OR8Q1P-201ENST00000526467 655 ntBASIC6.05□□□□□ -1.44
PCDH9Q9HC56 AP003396.4-201ENST00000527574 265 ntBASIC6.05□□□□□ -1.44
PCDH9Q9HC56 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC6.05□□□□□ -1.44
PCDH9Q9HC56 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC6.05□□□□□ -1.44
PCDH9Q9HC56 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC6.05□□□□□ -1.44
PCDH9Q9HC56 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC6.05□□□□□ -1.44
PCDH9Q9HC56 RPA2P1-201ENST00000556557 721 ntBASIC6.05□□□□□ -1.44
PCDH9Q9HC56 MIR4433B-201ENST00000581329 102 ntBASIC6.05□□□□□ -1.44
PCDH9Q9HC56 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC6.05□□□□□ -1.44
PCDH9Q9HC56 AP000919.1-201ENST00000582850 985 ntBASIC6.05□□□□□ -1.44
PCDH9Q9HC56 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC6.05□□□□□ -1.44
PCDH9Q9HC56 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC6.05□□□□□ -1.44
PCDH9Q9HC56 AC245014.3-201ENST00000618589 347 ntBASIC6.05□□□□□ -1.44
PCDH9Q9HC56 OR8A1-204ENST00000642111 1145 ntBASIC6.05□□□□□ -1.44
PCDH9Q9HC56 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PCDH9Q9HC56 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PCDH9Q9HC56 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.05□□□□□ -1.44
PCDH9Q9HC56 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC6.05□□□□□ -1.44
PCDH9Q9HC56 AC012254.3-201ENST00000591183 2117 ntBASIC6.05□□□□□ -1.44
PCDH9Q9HC56 AC239868.2-201ENST00000564237 4527 ntBASIC6.05□□□□□ -1.44
PCDH9Q9HC56 AC087516.1-201ENST00000561236 2428 ntBASIC6.05□□□□□ -1.44
PCDH9Q9HC56 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.05□□□□□ -1.44
PCDH9Q9HC56 QRSL1P1-201ENST00000400977 1540 ntBASIC6.04□□□□□ -1.44
PCDH9Q9HC56 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.04□□□□□ -1.44
PCDH9Q9HC56 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms