Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
LRRC40Q9H9A6 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
LRRC40Q9H9A6 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
LRRC40Q9H9A6 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
LRRC40Q9H9A6 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
LRRC40Q9H9A6 RNA5SP91-201ENST00000390902 119 ntBASIC5.9□□□□□ -1.46
LRRC40Q9H9A6 AC019205.1-201ENST00000421830 730 ntBASIC5.9□□□□□ -1.46
LRRC40Q9H9A6 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.9□□□□□ -1.46
LRRC40Q9H9A6 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.9□□□□□ -1.46
LRRC40Q9H9A6 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.9□□□□□ -1.46
LRRC40Q9H9A6 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.9□□□□□ -1.46
LRRC40Q9H9A6 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.9□□□□□ -1.46
LRRC40Q9H9A6 AC068491.1-201ENST00000449539 1241 ntBASIC5.9□□□□□ -1.46
LRRC40Q9H9A6 AC104339.1-201ENST00000465478 348 ntBASIC5.9□□□□□ -1.46
LRRC40Q9H9A6 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.9□□□□□ -1.46
LRRC40Q9H9A6 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
LRRC40Q9H9A6 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC5.9□□□□□ -1.46
LRRC40Q9H9A6 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.9□□□□□ -1.46
LRRC40Q9H9A6 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
LRRC40Q9H9A6 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC5.9□□□□□ -1.46
LRRC40Q9H9A6 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
LRRC40Q9H9A6 ZNF322P1-201ENST00000568013 1209 ntBASIC5.9□□□□□ -1.46
LRRC40Q9H9A6 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.9□□□□□ -1.46
LRRC40Q9H9A6 MIR6889-201ENST00000613185 59 ntBASIC5.9□□□□□ -1.46
LRRC40Q9H9A6 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
LRRC40Q9H9A6 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.47
LRRC40Q9H9A6 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
LRRC40Q9H9A6 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
LRRC40Q9H9A6 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.47
LRRC40Q9H9A6 AL355488.2-201ENST00000609909 2850 ntBASIC5.9□□□□□ -1.47
LRRC40Q9H9A6 AC004076.2-201ENST00000620532 3323 ntBASIC5.9□□□□□ -1.47
LRRC40Q9H9A6 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
LRRC40Q9H9A6 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.9□□□□□ -1.47
LRRC40Q9H9A6 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
LRRC40Q9H9A6 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
LRRC40Q9H9A6 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.89□□□□□ -1.47
LRRC40Q9H9A6 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.89□□□□□ -1.47
LRRC40Q9H9A6 AF287957.1-201ENST00000607368 1595 ntBASIC5.89□□□□□ -1.47
LRRC40Q9H9A6 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
LRRC40Q9H9A6 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
LRRC40Q9H9A6 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.89□□□□□ -1.47
LRRC40Q9H9A6 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
LRRC40Q9H9A6 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.89□□□□□ -1.47
LRRC40Q9H9A6 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
LRRC40Q9H9A6 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
LRRC40Q9H9A6 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC5.89□□□□□ -1.47
LRRC40Q9H9A6 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
LRRC40Q9H9A6 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
LRRC40Q9H9A6 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.89□□□□□ -1.47
LRRC40Q9H9A6 BX284632.2-201ENST00000421091 399 ntBASIC5.89□□□□□ -1.47
LRRC40Q9H9A6 AC007679.3-201ENST00000434035 414 ntBASIC5.89□□□□□ -1.47
LRRC40Q9H9A6 EIF5AP4-201ENST00000441206 465 ntBASIC5.89□□□□□ -1.47
LRRC40Q9H9A6 AL512605.1-202ENST00000441919 381 ntBASIC5.89□□□□□ -1.47
LRRC40Q9H9A6 AL359955.2-201ENST00000445380 353 ntBASIC5.89□□□□□ -1.47
LRRC40Q9H9A6 MTND6P5-201ENST00000448266 512 ntBASIC5.89□□□□□ -1.47
LRRC40Q9H9A6 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.89□□□□□ -1.47
LRRC40Q9H9A6 AL122020.1-201ENST00000472287 459 ntBASIC5.89□□□□□ -1.47
LRRC40Q9H9A6 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.89□□□□□ -1.47
LRRC40Q9H9A6 SNRPCP3-201ENST00000474888 476 ntBASIC5.89□□□□□ -1.47
LRRC40Q9H9A6 LSM3P4-201ENST00000502948 309 ntBASIC5.89□□□□□ -1.47
LRRC40Q9H9A6 RNA5SP340-201ENST00000517132 107 ntBASIC5.89□□□□□ -1.47
LRRC40Q9H9A6 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
LRRC40Q9H9A6 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.89□□□□□ -1.47
LRRC40Q9H9A6 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.89□□□□□ -1.47
LRRC40Q9H9A6 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.89□□□□□ -1.47
LRRC40Q9H9A6 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC5.89□□□□□ -1.47
LRRC40Q9H9A6 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.89□□□□□ -1.47
LRRC40Q9H9A6 CYCSP38-201ENST00000559840 322 ntBASIC5.89□□□□□ -1.47
LRRC40Q9H9A6 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.89□□□□□ -1.47
LRRC40Q9H9A6 HIRAP1-201ENST00000605318 787 ntBASIC5.89□□□□□ -1.47
LRRC40Q9H9A6 AC079776.5-201ENST00000641920 211 ntBASIC5.89□□□□□ -1.47
LRRC40Q9H9A6 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
LRRC40Q9H9A6 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
LRRC40Q9H9A6 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
LRRC40Q9H9A6 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
LRRC40Q9H9A6 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.89□□□□□ -1.47
LRRC40Q9H9A6 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
LRRC40Q9H9A6 MFSD8-219ENST00000641228 2559 ntBASIC5.89□□□□□ -1.47
LRRC40Q9H9A6 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
LRRC40Q9H9A6 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
LRRC40Q9H9A6 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
LRRC40Q9H9A6 BCORP1-203ENST00000513194 5093 ntBASIC5.89□□□□□ -1.47
LRRC40Q9H9A6 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
LRRC40Q9H9A6 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
LRRC40Q9H9A6 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
LRRC40Q9H9A6 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.89□□□□□ -1.47
LRRC40Q9H9A6 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
LRRC40Q9H9A6 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
LRRC40Q9H9A6 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.88□□□□□ -1.47
LRRC40Q9H9A6 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.88□□□□□ -1.47
LRRC40Q9H9A6 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.88□□□□□ -1.47
LRRC40Q9H9A6 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
LRRC40Q9H9A6 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
LRRC40Q9H9A6 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
LRRC40Q9H9A6 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
LRRC40Q9H9A6 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
LRRC40Q9H9A6 AL034546.1-201ENST00000623740 3693 ntBASIC5.88□□□□□ -1.47
LRRC40Q9H9A6 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
LRRC40Q9H9A6 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.88□□□□□ -1.47
LRRC40Q9H9A6 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms