Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 OOSP1-201ENST00000398992 1270 ntBASIC5.82□□□□□ -1.48
SNX18Q96RF0 AL590635.1-201ENST00000406314 586 ntBASIC5.82□□□□□ -1.48
SNX18Q96RF0 AL353133.1-201ENST00000407695 401 ntBASIC5.82□□□□□ -1.48
SNX18Q96RF0 SNORA11.5-201ENST00000408163 128 ntBASIC5.82□□□□□ -1.48
SNX18Q96RF0 AC099535.1-201ENST00000408928 371 ntBASIC5.82□□□□□ -1.48
SNX18Q96RF0 RN7SKP146-201ENST00000410242 334 ntBASIC5.82□□□□□ -1.48
SNX18Q96RF0 RN7SKP17-201ENST00000411242 351 ntBASIC5.82□□□□□ -1.48
SNX18Q96RF0 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC5.82□□□□□ -1.48
SNX18Q96RF0 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC5.82□□□□□ -1.48
SNX18Q96RF0 AL354766.1-201ENST00000423396 542 ntBASIC5.82□□□□□ -1.48
SNX18Q96RF0 ZNF736P7Y-201ENST00000425158 820 ntBASIC5.82□□□□□ -1.48
SNX18Q96RF0 AC013262.1-201ENST00000426710 252 ntBASIC5.82□□□□□ -1.48
SNX18Q96RF0 TRBV29OR9-2-201ENST00000427589 333 ntBASIC5.82□□□□□ -1.48
SNX18Q96RF0 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.82□□□□□ -1.48
SNX18Q96RF0 TRBV26OR9-2-201ENST00000432077 293 ntBASIC5.82□□□□□ -1.48
SNX18Q96RF0 CETN4P-201ENST00000432407 469 ntBASIC5.82□□□□□ -1.48
SNX18Q96RF0 CLNS1AP1-201ENST00000435954 682 ntBASIC5.82□□□□□ -1.48
SNX18Q96RF0 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC5.82□□□□□ -1.48
SNX18Q96RF0 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC5.82□□□□□ -1.48
SNX18Q96RF0 GAPDHP33-201ENST00000443168 1013 ntBASIC5.82□□□□□ -1.48
SNX18Q96RF0 ELOCP13-201ENST00000443934 329 ntBASIC5.82□□□□□ -1.48
SNX18Q96RF0 RAB28P3-201ENST00000448325 597 ntBASIC5.82□□□□□ -1.48
SNX18Q96RF0 MTND2P8-201ENST00000450555 1025 ntBASIC5.82□□□□□ -1.48
SNX18Q96RF0 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC5.82□□□□□ -1.48
SNX18Q96RF0 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SNX18Q96RF0 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC5.82□□□□□ -1.48
SNX18Q96RF0 RPS7P11-201ENST00000484240 586 ntBASIC5.82□□□□□ -1.48
SNX18Q96RF0 RN7SL423P-201ENST00000486202 304 ntBASIC5.82□□□□□ -1.48
SNX18Q96RF0 WDR78-207ENST00000488333 613 ntTSL 3 BASIC5.82□□□□□ -1.48
SNX18Q96RF0 RN7SL205P-201ENST00000490174 284 ntBASIC5.82□□□□□ -1.48
SNX18Q96RF0 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC5.82□□□□□ -1.48
SNX18Q96RF0 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC5.82□□□□□ -1.48
SNX18Q96RF0 RNU5A-7P-201ENST00000515979 116 ntBASIC5.82□□□□□ -1.48
SNX18Q96RF0 RNU6-1334P-201ENST00000516032 105 ntBASIC5.82□□□□□ -1.48
SNX18Q96RF0 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC5.82□□□□□ -1.48
SNX18Q96RF0 AC021451.1-201ENST00000523498 1129 ntBASIC5.82□□□□□ -1.48
SNX18Q96RF0 OR56A7P-201ENST00000524865 941 ntBASIC5.82□□□□□ -1.48
SNX18Q96RF0 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC5.82□□□□□ -1.48
SNX18Q96RF0 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
SNX18Q96RF0 LRRC34P1-201ENST00000542742 915 ntBASIC5.82□□□□□ -1.48
SNX18Q96RF0 RN7SL208P-201ENST00000577964 296 ntBASIC5.82□□□□□ -1.48
SNX18Q96RF0 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC5.82□□□□□ -1.48
SNX18Q96RF0 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC5.82□□□□□ -1.48
SNX18Q96RF0 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC5.82□□□□□ -1.48
SNX18Q96RF0 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.82□□□□□ -1.48
SNX18Q96RF0 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC5.82□□□□□ -1.48
SNX18Q96RF0 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.82□□□□□ -1.48
SNX18Q96RF0 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC5.82□□□□□ -1.48
SNX18Q96RF0 AC002069.2-201ENST00000603580 883 ntBASIC5.82□□□□□ -1.48
SNX18Q96RF0 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC5.82□□□□□ -1.48
SNX18Q96RF0 AL137000.1-201ENST00000610528 1244 ntBASIC5.82□□□□□ -1.48
SNX18Q96RF0 AC004241.3-201ENST00000611728 517 ntBASIC5.82□□□□□ -1.48
SNX18Q96RF0 AC015819.1-201ENST00000613588 663 ntBASIC5.82□□□□□ -1.48
SNX18Q96RF0 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC5.82□□□□□ -1.48
SNX18Q96RF0 AC007275.1-201ENST00000621243 671 ntBASIC5.82□□□□□ -1.48
SNX18Q96RF0 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SNX18Q96RF0 AC009039.2-201ENST00000624524 529 ntBASIC5.82□□□□□ -1.48
SNX18Q96RF0 CU459211.1-201ENST00000635667 749 ntBASIC5.82□□□□□ -1.48
SNX18Q96RF0 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SNX18Q96RF0 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SNX18Q96RF0 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
SNX18Q96RF0 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SNX18Q96RF0 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.82□□□□□ -1.48
SNX18Q96RF0 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SNX18Q96RF0 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.82□□□□□ -1.48
SNX18Q96RF0 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SNX18Q96RF0 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SNX18Q96RF0 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC5.81□□□□□ -1.48
SNX18Q96RF0 AC005261.6-201ENST00000623072 1387 ntBASIC5.81□□□□□ -1.48
SNX18Q96RF0 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SNX18Q96RF0 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
SNX18Q96RF0 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.81□□□□□ -1.48
SNX18Q96RF0 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
SNX18Q96RF0 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.81□□□□□ -1.48
SNX18Q96RF0 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC5.81□□□□□ -1.48
SNX18Q96RF0 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
SNX18Q96RF0 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SNX18Q96RF0 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
SNX18Q96RF0 SNORA7A-201ENST00000384765 139 ntBASIC5.81□□□□□ -1.48
SNX18Q96RF0 RPL5P20-201ENST00000403848 896 ntBASIC5.81□□□□□ -1.48
SNX18Q96RF0 Z86062.1-201ENST00000406773 777 ntBASIC5.81□□□□□ -1.48
SNX18Q96RF0 RNA5SP155-201ENST00000411154 129 ntBASIC5.81□□□□□ -1.48
SNX18Q96RF0 RANP4-201ENST00000413361 655 ntBASIC5.81□□□□□ -1.48
SNX18Q96RF0 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC5.81□□□□□ -1.48
SNX18Q96RF0 VPS26BP1-201ENST00000417155 755 ntBASIC5.81□□□□□ -1.48
SNX18Q96RF0 VTI1BP4-201ENST00000427516 527 ntBASIC5.81□□□□□ -1.48
SNX18Q96RF0 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC5.81□□□□□ -1.48
SNX18Q96RF0 AC245517.2-201ENST00000442890 346 ntBASIC5.81□□□□□ -1.48
SNX18Q96RF0 AL031681.1-201ENST00000443304 400 ntBASIC5.81□□□□□ -1.48
SNX18Q96RF0 AC099063.2-201ENST00000446360 662 ntBASIC5.81□□□□□ -1.48
SNX18Q96RF0 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC5.81□□□□□ -1.48
SNX18Q96RF0 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC5.81□□□□□ -1.48
SNX18Q96RF0 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC5.81□□□□□ -1.48
SNX18Q96RF0 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC5.81□□□□□ -1.48
SNX18Q96RF0 AC004890.1-201ENST00000461005 181 ntBASIC5.81□□□□□ -1.48
SNX18Q96RF0 RPL32P14-201ENST00000463196 378 ntBASIC5.81□□□□□ -1.48
SNX18Q96RF0 NPM1P29-201ENST00000483112 803 ntBASIC5.81□□□□□ -1.48
SNX18Q96RF0 RN7SL649P-201ENST00000496974 275 ntBASIC5.81□□□□□ -1.48
SNX18Q96RF0 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC5.81□□□□□ -1.48
SNX18Q96RF0 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms