Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC7.35□□□□□ -1.23
CHMP4CQ96CF2 OR51C1P-201ENST00000608504 942 ntBASIC7.35□□□□□ -1.23
CHMP4CQ96CF2 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC7.35□□□□□ -1.23
CHMP4CQ96CF2 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC7.35□□□□□ -1.23
CHMP4CQ96CF2 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC7.35□□□□□ -1.23
CHMP4CQ96CF2 LYARP1-201ENST00000436977 1501 ntBASIC7.35□□□□□ -1.23
CHMP4CQ96CF2 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CHMP4CQ96CF2 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC7.35□□□□□ -1.23
CHMP4CQ96CF2 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CHMP4CQ96CF2 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC7.35□□□□□ -1.23
CHMP4CQ96CF2 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CHMP4CQ96CF2 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CHMP4CQ96CF2 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CHMP4CQ96CF2 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CHMP4CQ96CF2 AP001284.1-201ENST00000528393 2118 ntBASIC7.34□□□□□ -1.23
CHMP4CQ96CF2 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC7.34□□□□□ -1.23
CHMP4CQ96CF2 AL445238.1-204ENST00000400311 463 ntBASIC7.34□□□□□ -1.23
CHMP4CQ96CF2 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC7.34□□□□□ -1.23
CHMP4CQ96CF2 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC7.34□□□□□ -1.23
CHMP4CQ96CF2 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC7.34□□□□□ -1.23
CHMP4CQ96CF2 AC023141.6-201ENST00000429418 337 ntBASIC7.34□□□□□ -1.23
CHMP4CQ96CF2 RPSAP65-201ENST00000429660 595 ntBASIC7.34□□□□□ -1.23
CHMP4CQ96CF2 MTCO1P45-201ENST00000431457 267 ntBASIC7.34□□□□□ -1.23
CHMP4CQ96CF2 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC7.34□□□□□ -1.23
CHMP4CQ96CF2 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC7.34□□□□□ -1.23
CHMP4CQ96CF2 AC016908.1-201ENST00000442571 1219 ntBASIC7.34□□□□□ -1.23
CHMP4CQ96CF2 RPS27AP3-201ENST00000453803 454 ntBASIC7.34□□□□□ -1.23
CHMP4CQ96CF2 EIF4A2P2-201ENST00000455776 1070 ntBASIC7.34□□□□□ -1.23
CHMP4CQ96CF2 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC7.34□□□□□ -1.23
CHMP4CQ96CF2 AL158068.1-201ENST00000506116 616 ntBASIC7.34□□□□□ -1.23
CHMP4CQ96CF2 AC093815.1-201ENST00000508637 280 ntBASIC7.34□□□□□ -1.23
CHMP4CQ96CF2 AC006499.4-201ENST00000510947 694 ntBASIC7.34□□□□□ -1.23
CHMP4CQ96CF2 HMGB1P47-201ENST00000511281 589 ntBASIC7.34□□□□□ -1.23
CHMP4CQ96CF2 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC7.34□□□□□ -1.23
CHMP4CQ96CF2 RN7SKP238-201ENST00000516483 249 ntBASIC7.34□□□□□ -1.23
CHMP4CQ96CF2 TOMM20P1-201ENST00000534518 427 ntBASIC7.34□□□□□ -1.23
CHMP4CQ96CF2 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC7.34□□□□□ -1.23
CHMP4CQ96CF2 AC026826.3-201ENST00000561747 158 ntBASIC7.34□□□□□ -1.23
CHMP4CQ96CF2 AC122134.1-202ENST00000569111 1201 ntBASIC7.34□□□□□ -1.23
CHMP4CQ96CF2 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC7.34□□□□□ -1.23
CHMP4CQ96CF2 PPATP2-201ENST00000605635 508 ntBASIC7.34□□□□□ -1.23
CHMP4CQ96CF2 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC7.34□□□□□ -1.23
CHMP4CQ96CF2 Six3os1_2.1-201ENST00000616963 217 ntBASIC7.34□□□□□ -1.23
CHMP4CQ96CF2 AP001052.1-201ENST00000626421 99 ntBASIC7.34□□□□□ -1.23
CHMP4CQ96CF2 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CHMP4CQ96CF2 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC7.34□□□□□ -1.23
CHMP4CQ96CF2 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC7.34□□□□□ -1.23
CHMP4CQ96CF2 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC7.34□□□□□ -1.23
CHMP4CQ96CF2 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC7.34□□□□□ -1.23
CHMP4CQ96CF2 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CHMP4CQ96CF2 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC7.34□□□□□ -1.23
CHMP4CQ96CF2 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CHMP4CQ96CF2 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC7.33□□□□□ -1.24
CHMP4CQ96CF2 EEF1A1P21-201ENST00000512363 1344 ntBASIC7.33□□□□□ -1.24
CHMP4CQ96CF2 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
CHMP4CQ96CF2 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
CHMP4CQ96CF2 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CHMP4CQ96CF2 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
CHMP4CQ96CF2 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC7.33□□□□□ -1.24
CHMP4CQ96CF2 RNU1-59P-201ENST00000364829 162 ntBASIC7.33□□□□□ -1.24
CHMP4CQ96CF2 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CHMP4CQ96CF2 MIR130B-202ENST00000385018 82 ntBASIC7.33□□□□□ -1.24
CHMP4CQ96CF2 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC7.33□□□□□ -1.24
CHMP4CQ96CF2 AC007068.1-201ENST00000396690 844 ntBASIC7.33□□□□□ -1.24
CHMP4CQ96CF2 RN7SKP121-201ENST00000410842 305 ntBASIC7.33□□□□□ -1.24
CHMP4CQ96CF2 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC7.33□□□□□ -1.24
CHMP4CQ96CF2 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC7.33□□□□□ -1.24
CHMP4CQ96CF2 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CHMP4CQ96CF2 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC7.33□□□□□ -1.24
CHMP4CQ96CF2 RPL5P7-201ENST00000444235 813 ntBASIC7.33□□□□□ -1.24
CHMP4CQ96CF2 AL590004.3-202ENST00000445883 451 ntBASIC7.33□□□□□ -1.24
CHMP4CQ96CF2 RPL23AP60-201ENST00000450011 454 ntBASIC7.33□□□□□ -1.24
CHMP4CQ96CF2 NDUFA5P5-201ENST00000468361 342 ntBASIC7.33□□□□□ -1.24
CHMP4CQ96CF2 PFN2-209ENST00000481275 560 ntTSL 4 BASIC7.33□□□□□ -1.24
CHMP4CQ96CF2 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC7.33□□□□□ -1.24
CHMP4CQ96CF2 PFN1P8-201ENST00000497012 543 ntBASIC7.33□□□□□ -1.24
CHMP4CQ96CF2 AK4P6-201ENST00000505168 528 ntBASIC7.33□□□□□ -1.24
CHMP4CQ96CF2 OR4A6P-201ENST00000534364 970 ntBASIC7.33□□□□□ -1.24
CHMP4CQ96CF2 MED21-206ENST00000546323 575 ntTSL 3 BASIC7.33□□□□□ -1.24
CHMP4CQ96CF2 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC7.33□□□□□ -1.24
CHMP4CQ96CF2 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC7.33□□□□□ -1.24
CHMP4CQ96CF2 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC7.33□□□□□ -1.24
CHMP4CQ96CF2 AC093524.1-201ENST00000564266 1094 ntBASIC7.33□□□□□ -1.24
CHMP4CQ96CF2 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC7.33□□□□□ -1.24
CHMP4CQ96CF2 AC002310.3-201ENST00000569728 723 ntBASIC7.33□□□□□ -1.24
CHMP4CQ96CF2 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC7.33□□□□□ -1.24
CHMP4CQ96CF2 OOSP1P2-201ENST00000579644 351 ntBASIC7.33□□□□□ -1.24
CHMP4CQ96CF2 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC7.33□□□□□ -1.24
CHMP4CQ96CF2 U1.25-201ENST00000614085 162 ntBASIC7.33□□□□□ -1.24
CHMP4CQ96CF2 U1.34-201ENST00000618578 162 ntBASIC7.33□□□□□ -1.24
CHMP4CQ96CF2 U1.31-201ENST00000620022 160 ntBASIC7.33□□□□□ -1.24
CHMP4CQ96CF2 AC005225.5-201ENST00000623547 2225 ntBASIC7.33□□□□□ -1.24
CHMP4CQ96CF2 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CHMP4CQ96CF2 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC7.33□□□□□ -1.24
CHMP4CQ96CF2 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CHMP4CQ96CF2 OFD1P15Y-201ENST00000411536 1392 ntBASIC7.33□□□□□ -1.24
CHMP4CQ96CF2 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CHMP4CQ96CF2 PSG10P-201ENST00000501199 1500 ntBASIC7.32□□□□□ -1.24
CHMP4CQ96CF2 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC7.32□□□□□ -1.24
CHMP4CQ96CF2 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms