Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
VPS33AQ96AX1 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
VPS33AQ96AX1 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.75□□□□□ -1.49
VPS33AQ96AX1 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.75□□□□□ -1.49
VPS33AQ96AX1 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.75□□□□□ -1.49
VPS33AQ96AX1 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
VPS33AQ96AX1 SMG1P7-201ENST00000565246 2704 ntBASIC5.75□□□□□ -1.49
VPS33AQ96AX1 RN7SKP128-201ENST00000364270 303 ntBASIC5.75□□□□□ -1.49
VPS33AQ96AX1 RNA5SP485-201ENST00000365053 119 ntBASIC5.75□□□□□ -1.49
VPS33AQ96AX1 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
VPS33AQ96AX1 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
VPS33AQ96AX1 AC245096.1-201ENST00000413104 546 ntBASIC5.75□□□□□ -1.49
VPS33AQ96AX1 AL132671.1-201ENST00000415736 308 ntTSL 3 BASIC5.75□□□□□ -1.49
VPS33AQ96AX1 VTI1BP4-201ENST00000427516 527 ntBASIC5.75□□□□□ -1.49
VPS33AQ96AX1 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC5.75□□□□□ -1.49
VPS33AQ96AX1 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.75□□□□□ -1.49
VPS33AQ96AX1 MTCO1P57-201ENST00000432182 261 ntBASIC5.75□□□□□ -1.49
VPS33AQ96AX1 ARMC4P1-201ENST00000438905 707 ntBASIC5.75□□□□□ -1.49
VPS33AQ96AX1 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
VPS33AQ96AX1 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
VPS33AQ96AX1 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.75□□□□□ -1.49
VPS33AQ96AX1 AC022730.1-201ENST00000473114 568 ntBASIC5.75□□□□□ -1.49
VPS33AQ96AX1 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC5.75□□□□□ -1.49
VPS33AQ96AX1 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC5.75□□□□□ -1.49
VPS33AQ96AX1 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC5.75□□□□□ -1.49
VPS33AQ96AX1 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.75□□□□□ -1.49
VPS33AQ96AX1 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
VPS33AQ96AX1 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
VPS33AQ96AX1 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC5.75□□□□□ -1.49
VPS33AQ96AX1 AC027796.1-201ENST00000575593 512 ntBASIC5.75□□□□□ -1.49
VPS33AQ96AX1 AC090774.2-201ENST00000584708 322 ntBASIC5.75□□□□□ -1.49
VPS33AQ96AX1 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.75□□□□□ -1.49
VPS33AQ96AX1 AC119403.2-201ENST00000590960 598 ntBASIC5.75□□□□□ -1.49
VPS33AQ96AX1 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.75□□□□□ -1.49
VPS33AQ96AX1 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.75□□□□□ -1.49
VPS33AQ96AX1 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.75□□□□□ -1.49
VPS33AQ96AX1 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC5.75□□□□□ -1.49
VPS33AQ96AX1 AC007620.3-201ENST00000608131 497 ntBASIC5.75□□□□□ -1.49
VPS33AQ96AX1 MIR6070-201ENST00000613967 103 ntBASIC5.75□□□□□ -1.49
VPS33AQ96AX1 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.75□□□□□ -1.49
VPS33AQ96AX1 RMST_5.1-201ENST00000618704 126 ntBASIC5.75□□□□□ -1.49
VPS33AQ96AX1 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC5.75□□□□□ -1.49
VPS33AQ96AX1 SNX18P12-201ENST00000624821 759 ntBASIC5.75□□□□□ -1.49
VPS33AQ96AX1 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.75□□□□□ -1.49
VPS33AQ96AX1 CLUHP10-201ENST00000631979 980 ntBASIC5.75□□□□□ -1.49
VPS33AQ96AX1 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
VPS33AQ96AX1 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
VPS33AQ96AX1 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC5.75□□□□□ -1.49
VPS33AQ96AX1 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
VPS33AQ96AX1 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
VPS33AQ96AX1 AL022311.1-201ENST00000623726 19416 ntBASIC5.75□□□□□ -1.49
VPS33AQ96AX1 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
VPS33AQ96AX1 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
VPS33AQ96AX1 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
VPS33AQ96AX1 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.74□□□□□ -1.49
VPS33AQ96AX1 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
VPS33AQ96AX1 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
VPS33AQ96AX1 AC004076.2-201ENST00000620532 3323 ntBASIC5.74□□□□□ -1.49
VPS33AQ96AX1 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
VPS33AQ96AX1 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
VPS33AQ96AX1 RPL11P4-201ENST00000332269 436 ntBASIC5.74□□□□□ -1.49
VPS33AQ96AX1 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
VPS33AQ96AX1 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
VPS33AQ96AX1 U3.10-201ENST00000364459 214 ntBASIC5.74□□□□□ -1.49
VPS33AQ96AX1 RNU6-1251P-201ENST00000364502 107 ntBASIC5.74□□□□□ -1.49
VPS33AQ96AX1 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
VPS33AQ96AX1 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC5.74□□□□□ -1.49
VPS33AQ96AX1 MT-RNR1-201ENST00000389680 954 ntBASIC5.74□□□□□ -1.49
VPS33AQ96AX1 NPM1P10-201ENST00000398310 865 ntBASIC5.74□□□□□ -1.49
VPS33AQ96AX1 ST13P16-201ENST00000401760 781 ntBASIC5.74□□□□□ -1.49
VPS33AQ96AX1 RNA5SP231-201ENST00000410496 138 ntBASIC5.74□□□□□ -1.49
VPS33AQ96AX1 SNORA79B-201ENST00000410557 148 ntBASIC5.74□□□□□ -1.49
VPS33AQ96AX1 RPS15AP30-201ENST00000420976 390 ntBASIC5.74□□□□□ -1.49
VPS33AQ96AX1 GLUD1P9-201ENST00000420997 1173 ntBASIC5.74□□□□□ -1.49
VPS33AQ96AX1 KIF4CP-201ENST00000422742 1279 ntBASIC5.74□□□□□ -1.49
VPS33AQ96AX1 Z84478.1-201ENST00000438230 1219 ntBASIC5.74□□□□□ -1.49
VPS33AQ96AX1 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.74□□□□□ -1.49
VPS33AQ96AX1 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC5.74□□□□□ -1.49
VPS33AQ96AX1 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.74□□□□□ -1.49
VPS33AQ96AX1 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.74□□□□□ -1.49
VPS33AQ96AX1 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.74□□□□□ -1.49
VPS33AQ96AX1 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC5.74□□□□□ -1.49
VPS33AQ96AX1 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC5.74□□□□□ -1.49
VPS33AQ96AX1 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC5.74□□□□□ -1.49
VPS33AQ96AX1 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.74□□□□□ -1.49
VPS33AQ96AX1 AC131935.1-201ENST00000524621 333 ntBASIC5.74□□□□□ -1.49
VPS33AQ96AX1 CYCSP25-201ENST00000525280 316 ntBASIC5.74□□□□□ -1.49
VPS33AQ96AX1 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC5.74□□□□□ -1.49
VPS33AQ96AX1 MEG8-217ENST00000556637 924 ntTSL 5 BASIC5.74□□□□□ -1.49
VPS33AQ96AX1 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.74□□□□□ -1.49
VPS33AQ96AX1 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.74□□□□□ -1.49
VPS33AQ96AX1 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.74□□□□□ -1.49
VPS33AQ96AX1 AC025283.1-201ENST00000572039 734 ntBASIC5.74□□□□□ -1.49
VPS33AQ96AX1 FAM106CP-201ENST00000582212 507 ntBASIC5.74□□□□□ -1.49
VPS33AQ96AX1 AC024267.2-201ENST00000582737 417 ntBASIC5.74□□□□□ -1.49
VPS33AQ96AX1 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.74□□□□□ -1.49
VPS33AQ96AX1 AC005229.3-201ENST00000603438 323 ntBASIC5.74□□□□□ -1.49
VPS33AQ96AX1 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC5.74□□□□□ -1.49
VPS33AQ96AX1 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC5.74□□□□□ -1.49
VPS33AQ96AX1 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms