Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CCDC65Q8IXS2 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC6.46□□□□□ -1.38
CCDC65Q8IXS2 AC117409.1-201ENST00000470499 1310 ntBASIC6.46□□□□□ -1.38
CCDC65Q8IXS2 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
CCDC65Q8IXS2 MFSD8-239ENST00000641590 2479 ntBASIC6.45□□□□□ -1.38
CCDC65Q8IXS2 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.45□□□□□ -1.38
CCDC65Q8IXS2 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
CCDC65Q8IXS2 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CCDC65Q8IXS2 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC6.45□□□□□ -1.38
CCDC65Q8IXS2 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CCDC65Q8IXS2 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CCDC65Q8IXS2 MFSD8-219ENST00000641228 2559 ntBASIC6.45□□□□□ -1.38
CCDC65Q8IXS2 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC6.45□□□□□ -1.38
CCDC65Q8IXS2 RNA5SP273-201ENST00000362484 113 ntBASIC6.45□□□□□ -1.38
CCDC65Q8IXS2 RNA5SP477-201ENST00000362639 119 ntBASIC6.45□□□□□ -1.38
CCDC65Q8IXS2 RNA5SP433-201ENST00000364491 114 ntBASIC6.45□□□□□ -1.38
CCDC65Q8IXS2 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
CCDC65Q8IXS2 RN7SKP29-201ENST00000410957 272 ntBASIC6.45□□□□□ -1.38
CCDC65Q8IXS2 AC021876.1-201ENST00000425959 359 ntBASIC6.45□□□□□ -1.38
CCDC65Q8IXS2 VN1R21P-201ENST00000426703 765 ntBASIC6.45□□□□□ -1.38
CCDC65Q8IXS2 AC126120.1-201ENST00000431082 470 ntBASIC6.45□□□□□ -1.38
CCDC65Q8IXS2 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.45□□□□□ -1.38
CCDC65Q8IXS2 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC6.45□□□□□ -1.38
CCDC65Q8IXS2 RN7SL741P-201ENST00000482473 289 ntBASIC6.45□□□□□ -1.38
CCDC65Q8IXS2 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.45□□□□□ -1.38
CCDC65Q8IXS2 PDCL3P4-201ENST00000489621 720 ntBASIC6.45□□□□□ -1.38
CCDC65Q8IXS2 RPS26P24-201ENST00000497656 331 ntBASIC6.45□□□□□ -1.38
CCDC65Q8IXS2 AC105384.2-201ENST00000508433 640 ntBASIC6.45□□□□□ -1.38
CCDC65Q8IXS2 OR5H7P-201ENST00000514084 930 ntBASIC6.45□□□□□ -1.38
CCDC65Q8IXS2 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC6.45□□□□□ -1.38
CCDC65Q8IXS2 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC6.45□□□□□ -1.38
CCDC65Q8IXS2 Y_RNA.667-201ENST00000516212 107 ntBASIC6.45□□□□□ -1.38
CCDC65Q8IXS2 RNA5SP438-201ENST00000516561 112 ntBASIC6.45□□□□□ -1.38
CCDC65Q8IXS2 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC6.45□□□□□ -1.38
CCDC65Q8IXS2 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.45□□□□□ -1.38
CCDC65Q8IXS2 AC107958.1-201ENST00000556576 290 ntBASIC6.45□□□□□ -1.38
CCDC65Q8IXS2 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CCDC65Q8IXS2 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC6.45□□□□□ -1.38
CCDC65Q8IXS2 AC025262.3-201ENST00000623666 360 ntBASIC6.45□□□□□ -1.38
CCDC65Q8IXS2 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.45□□□□□ -1.38
CCDC65Q8IXS2 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC6.45□□□□□ -1.38
CCDC65Q8IXS2 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.45□□□□□ -1.38
CCDC65Q8IXS2 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.45□□□□□ -1.38
CCDC65Q8IXS2 MTCO1P7-201ENST00000419523 1542 ntBASIC6.45□□□□□ -1.38
CCDC65Q8IXS2 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
CCDC65Q8IXS2 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CCDC65Q8IXS2 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CCDC65Q8IXS2 AC068870.3-201ENST00000625077 2536 ntBASIC6.44□□□□□ -1.38
CCDC65Q8IXS2 AC093671.1-201ENST00000624981 2929 ntBASIC6.44□□□□□ -1.38
CCDC65Q8IXS2 AC015799.1-201ENST00000622996 3122 ntBASIC6.44□□□□□ -1.38
CCDC65Q8IXS2 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CCDC65Q8IXS2 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
CCDC65Q8IXS2 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.44□□□□□ -1.38
CCDC65Q8IXS2 SUGT1P2-201ENST00000379452 992 ntBASIC6.44□□□□□ -1.38
CCDC65Q8IXS2 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.44□□□□□ -1.38
CCDC65Q8IXS2 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.44□□□□□ -1.38
CCDC65Q8IXS2 METTL15P3-201ENST00000415522 1221 ntBASIC6.44□□□□□ -1.38
CCDC65Q8IXS2 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC6.44□□□□□ -1.38
CCDC65Q8IXS2 MGAT2P2-201ENST00000427194 797 ntBASIC6.44□□□□□ -1.38
CCDC65Q8IXS2 NDUFS5P5-201ENST00000437256 321 ntBASIC6.44□□□□□ -1.38
CCDC65Q8IXS2 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.44□□□□□ -1.38
CCDC65Q8IXS2 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.44□□□□□ -1.38
CCDC65Q8IXS2 RPL12P39-201ENST00000455456 496 ntBASIC6.44□□□□□ -1.38
CCDC65Q8IXS2 AC093166.4-201ENST00000457867 318 ntBASIC6.44□□□□□ -1.38
CCDC65Q8IXS2 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC6.44□□□□□ -1.38
CCDC65Q8IXS2 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC6.44□□□□□ -1.38
CCDC65Q8IXS2 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC6.44□□□□□ -1.38
CCDC65Q8IXS2 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CCDC65Q8IXS2 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC6.44□□□□□ -1.38
CCDC65Q8IXS2 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC6.44□□□□□ -1.38
CCDC65Q8IXS2 AC126615.2-201ENST00000553003 515 ntBASIC6.44□□□□□ -1.38
CCDC65Q8IXS2 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC6.44□□□□□ -1.38
CCDC65Q8IXS2 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC6.44□□□□□ -1.38
CCDC65Q8IXS2 FAM27E4-201ENST00000605259 342 ntBASIC6.44□□□□□ -1.38
CCDC65Q8IXS2 Six3os1_2.1-201ENST00000616963 217 ntBASIC6.44□□□□□ -1.38
CCDC65Q8IXS2 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC6.44□□□□□ -1.38
CCDC65Q8IXS2 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.44□□□□□ -1.38
CCDC65Q8IXS2 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CCDC65Q8IXS2 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.44□□□□□ -1.38
CCDC65Q8IXS2 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
CCDC65Q8IXS2 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CCDC65Q8IXS2 WDR95P-201ENST00000425638 1542 ntBASIC6.44□□□□□ -1.38
CCDC65Q8IXS2 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC6.44□□□□□ -1.38
CCDC65Q8IXS2 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
CCDC65Q8IXS2 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6.44□□□□□ -1.38
CCDC65Q8IXS2 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.43□□□□□ -1.38
CCDC65Q8IXS2 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC6.43□□□□□ -1.38
CCDC65Q8IXS2 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.43□□□□□ -1.38
CCDC65Q8IXS2 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC65Q8IXS2 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6.43□□□□□ -1.38
CCDC65Q8IXS2 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.43□□□□□ -1.38
CCDC65Q8IXS2 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
CCDC65Q8IXS2 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC6.43□□□□□ -1.38
CCDC65Q8IXS2 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC65Q8IXS2 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC65Q8IXS2 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
CCDC65Q8IXS2 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
CCDC65Q8IXS2 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
CCDC65Q8IXS2 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC6.43□□□□□ -1.38
CCDC65Q8IXS2 VN1R12P-201ENST00000403778 876 ntBASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms