Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RFWD3Q6PCD5 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC6.08□□□□□ -1.44
RFWD3Q6PCD5 THAP12P9-201ENST00000503971 2360 ntBASIC6.08□□□□□ -1.44
RFWD3Q6PCD5 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RFWD3Q6PCD5 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.08□□□□□ -1.44
RFWD3Q6PCD5 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
RFWD3Q6PCD5 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RFWD3Q6PCD5 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC6.07□□□□□ -1.44
RFWD3Q6PCD5 AC114876.1-201ENST00000490962 1366 ntBASIC6.07□□□□□ -1.44
RFWD3Q6PCD5 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
RFWD3Q6PCD5 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RFWD3Q6PCD5 RNF19BPY-201ENST00000458209 1550 ntBASIC6.07□□□□□ -1.44
RFWD3Q6PCD5 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RFWD3Q6PCD5 RN7SKP78-201ENST00000364711 318 ntBASIC6.07□□□□□ -1.44
RFWD3Q6PCD5 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RFWD3Q6PCD5 RNA5SP284-201ENST00000384547 118 ntBASIC6.07□□□□□ -1.44
RFWD3Q6PCD5 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
RFWD3Q6PCD5 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC6.07□□□□□ -1.44
RFWD3Q6PCD5 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC6.07□□□□□ -1.44
RFWD3Q6PCD5 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC6.07□□□□□ -1.44
RFWD3Q6PCD5 MRPS21P2-201ENST00000424704 264 ntBASIC6.07□□□□□ -1.44
RFWD3Q6PCD5 RPL5P2-201ENST00000429598 854 ntBASIC6.07□□□□□ -1.44
RFWD3Q6PCD5 RPS3AP38-201ENST00000435889 763 ntBASIC6.07□□□□□ -1.44
RFWD3Q6PCD5 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
RFWD3Q6PCD5 AL157777.1-201ENST00000468100 304 ntBASIC6.07□□□□□ -1.44
RFWD3Q6PCD5 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC6.07□□□□□ -1.44
RFWD3Q6PCD5 PFN1P6-201ENST00000476786 399 ntBASIC6.07□□□□□ -1.44
RFWD3Q6PCD5 AC093719.1-201ENST00000480427 441 ntBASIC6.07□□□□□ -1.44
RFWD3Q6PCD5 RPL38P3-201ENST00000484463 213 ntBASIC6.07□□□□□ -1.44
RFWD3Q6PCD5 CR383656.1-201ENST00000484916 377 ntBASIC6.07□□□□□ -1.44
RFWD3Q6PCD5 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
RFWD3Q6PCD5 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6.07□□□□□ -1.44
RFWD3Q6PCD5 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC6.07□□□□□ -1.44
RFWD3Q6PCD5 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC6.07□□□□□ -1.44
RFWD3Q6PCD5 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC6.07□□□□□ -1.44
RFWD3Q6PCD5 MTATP6P1-201ENST00000514057 681 ntBASIC6.07□□□□□ -1.44
RFWD3Q6PCD5 IGKV1OR22-1-201ENST00000521497 360 ntBASIC6.07□□□□□ -1.44
RFWD3Q6PCD5 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC6.07□□□□□ -1.44
RFWD3Q6PCD5 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.07□□□□□ -1.44
RFWD3Q6PCD5 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC6.07□□□□□ -1.44
RFWD3Q6PCD5 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
RFWD3Q6PCD5 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.07□□□□□ -1.44
RFWD3Q6PCD5 AC145423.1-201ENST00000605712 336 ntBASIC6.07□□□□□ -1.44
RFWD3Q6PCD5 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC6.07□□□□□ -1.44
RFWD3Q6PCD5 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC6.07□□□□□ -1.44
RFWD3Q6PCD5 AC008691.1-209ENST00000642094 814 ntBASIC6.07□□□□□ -1.44
RFWD3Q6PCD5 AL078595.2-201ENST00000605309 1780 ntBASIC6.07□□□□□ -1.44
RFWD3Q6PCD5 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RFWD3Q6PCD5 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.07□□□□□ -1.44
RFWD3Q6PCD5 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
RFWD3Q6PCD5 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RFWD3Q6PCD5 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC6.07□□□□□ -1.44
RFWD3Q6PCD5 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
RFWD3Q6PCD5 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RFWD3Q6PCD5 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
RFWD3Q6PCD5 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
RFWD3Q6PCD5 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RFWD3Q6PCD5 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.06□□□□□ -1.44
RFWD3Q6PCD5 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
RFWD3Q6PCD5 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RFWD3Q6PCD5 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC6.06□□□□□ -1.44
RFWD3Q6PCD5 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.06□□□□□ -1.44
RFWD3Q6PCD5 RN7SKP269-201ENST00000365545 319 ntBASIC6.06□□□□□ -1.44
RFWD3Q6PCD5 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
RFWD3Q6PCD5 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
RFWD3Q6PCD5 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC6.06□□□□□ -1.44
RFWD3Q6PCD5 NAP1L4P2-201ENST00000425958 899 ntBASIC6.06□□□□□ -1.44
RFWD3Q6PCD5 AC104843.2-201ENST00000427666 297 ntBASIC6.06□□□□□ -1.44
RFWD3Q6PCD5 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC6.06□□□□□ -1.44
RFWD3Q6PCD5 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC6.06□□□□□ -1.44
RFWD3Q6PCD5 RPL36AP39-201ENST00000445859 318 ntBASIC6.06□□□□□ -1.44
RFWD3Q6PCD5 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC6.06□□□□□ -1.44
RFWD3Q6PCD5 AL603882.1-201ENST00000463059 681 ntBASIC6.06□□□□□ -1.44
RFWD3Q6PCD5 AC104109.1-201ENST00000498563 436 ntBASIC6.06□□□□□ -1.44
RFWD3Q6PCD5 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
RFWD3Q6PCD5 GAPDHP71-201ENST00000511530 1003 ntBASIC6.06□□□□□ -1.44
RFWD3Q6PCD5 IGLVIV-64-201ENST00000518581 301 ntBASIC6.06□□□□□ -1.44
RFWD3Q6PCD5 IGKV3D-34-201ENST00000522638 302 ntBASIC6.06□□□□□ -1.44
RFWD3Q6PCD5 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC6.06□□□□□ -1.44
RFWD3Q6PCD5 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC6.06□□□□□ -1.44
RFWD3Q6PCD5 AC091078.2-201ENST00000557145 559 ntBASIC6.06□□□□□ -1.44
RFWD3Q6PCD5 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC6.06□□□□□ -1.44
RFWD3Q6PCD5 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
RFWD3Q6PCD5 ADAM3B-201ENST00000569937 840 ntBASIC6.06□□□□□ -1.44
RFWD3Q6PCD5 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC6.06□□□□□ -1.44
RFWD3Q6PCD5 AL583832.1-201ENST00000603227 784 ntBASIC6.06□□□□□ -1.44
RFWD3Q6PCD5 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC6.06□□□□□ -1.44
RFWD3Q6PCD5 AL139099.4-201ENST00000614802 114 ntBASIC6.06□□□□□ -1.44
RFWD3Q6PCD5 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.06□□□□□ -1.44
RFWD3Q6PCD5 AC103703.1-201ENST00000634783 663 ntBASIC6.06□□□□□ -1.44
RFWD3Q6PCD5 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
RFWD3Q6PCD5 AC106872.5-201ENST00000508856 1416 ntBASIC6.06□□□□□ -1.44
RFWD3Q6PCD5 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6.06□□□□□ -1.44
RFWD3Q6PCD5 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC6.06□□□□□ -1.44
RFWD3Q6PCD5 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.06□□□□□ -1.44
RFWD3Q6PCD5 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
RFWD3Q6PCD5 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
RFWD3Q6PCD5 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.05□□□□□ -1.44
RFWD3Q6PCD5 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
RFWD3Q6PCD5 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms