Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC8.4□□□□□ -1.07
CDC42BPAQ5VT25 AP004607.3-201ENST00000530354 3915 ntBASIC8.4□□□□□ -1.07
CDC42BPAQ5VT25 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
CDC42BPAQ5VT25 WBP11P1-201ENST00000562560 1931 ntBASIC8.4□□□□□ -1.07
CDC42BPAQ5VT25 C14orf166-201ENST00000261700 7075 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
CDC42BPAQ5VT25 AC114947.2-201ENST00000565748 2125 ntBASIC8.4□□□□□ -1.07
CDC42BPAQ5VT25 CC2D2A-204ENST00000503292 5175 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
CDC42BPAQ5VT25 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
CDC42BPAQ5VT25 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
CDC42BPAQ5VT25 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC8.39□□□□□ -1.07
CDC42BPAQ5VT25 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
CDC42BPAQ5VT25 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC8.39□□□□□ -1.07
CDC42BPAQ5VT25 RNU1-146P-201ENST00000364015 165 ntBASIC8.39□□□□□ -1.07
CDC42BPAQ5VT25 RNU1-43P-201ENST00000365052 165 ntBASIC8.39□□□□□ -1.07
CDC42BPAQ5VT25 AL645733.1-201ENST00000402250 217 ntBASIC8.39□□□□□ -1.07
CDC42BPAQ5VT25 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC8.39□□□□□ -1.07
CDC42BPAQ5VT25 AC108161.1-201ENST00000461060 402 ntBASIC8.39□□□□□ -1.07
CDC42BPAQ5VT25 RPL37AP8-201ENST00000494116 276 ntBASIC8.39□□□□□ -1.07
CDC42BPAQ5VT25 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC8.39□□□□□ -1.07
CDC42BPAQ5VT25 HMGB1P40-201ENST00000525121 540 ntBASIC8.39□□□□□ -1.07
CDC42BPAQ5VT25 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC8.39□□□□□ -1.07
CDC42BPAQ5VT25 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC8.39□□□□□ -1.07
CDC42BPAQ5VT25 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC8.39□□□□□ -1.07
CDC42BPAQ5VT25 WWOX-217ENST00000620008 450 ntTSL 2 BASIC8.39□□□□□ -1.07
CDC42BPAQ5VT25 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
CDC42BPAQ5VT25 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
CDC42BPAQ5VT25 PLEKHM3-202ENST00000427836 9807 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
CDC42BPAQ5VT25 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC8.39□□□□□ -1.07
CDC42BPAQ5VT25 AC011493.1-201ENST00000596753 1632 ntBASIC8.39□□□□□ -1.07
CDC42BPAQ5VT25 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
CDC42BPAQ5VT25 ONECUT2-202ENST00000491143 16121 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
CDC42BPAQ5VT25 ODF2L-203ENST00000359242 7560 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
CDC42BPAQ5VT25 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
CDC42BPAQ5VT25 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC8.38□□□□□ -1.07
CDC42BPAQ5VT25 PCBP1-AS1-230ENST00000439670 2180 ntTSL 2 BASIC8.38□□□□□ -1.07
CDC42BPAQ5VT25 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
CDC42BPAQ5VT25 LIG3-202ENST00000378526 8400 ntAPPRIS P4 TSL 1 (best) BASIC8.38□□□□□ -1.07
CDC42BPAQ5VT25 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
CDC42BPAQ5VT25 RNU4-4P-201ENST00000364588 130 ntBASIC8.38□□□□□ -1.07
CDC42BPAQ5VT25 RNVU1-6-201ENST00000364688 164 ntBASIC8.38□□□□□ -1.07
CDC42BPAQ5VT25 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
CDC42BPAQ5VT25 RNU6ATAC7P-201ENST00000408111 127 ntBASIC8.38□□□□□ -1.07
CDC42BPAQ5VT25 RN7SKP253-201ENST00000516424 309 ntBASIC8.38□□□□□ -1.07
CDC42BPAQ5VT25 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC8.38□□□□□ -1.07
CDC42BPAQ5VT25 MIR4646-201ENST00000580775 63 ntBASIC8.38□□□□□ -1.07
CDC42BPAQ5VT25 AP000769.2-201ENST00000602344 396 ntBASIC8.38□□□□□ -1.07
CDC42BPAQ5VT25 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC8.38□□□□□ -1.07
CDC42BPAQ5VT25 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
CDC42BPAQ5VT25 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
CDC42BPAQ5VT25 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC8.38□□□□□ -1.07
CDC42BPAQ5VT25 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
CDC42BPAQ5VT25 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
CDC42BPAQ5VT25 PRICKLE2-201ENST00000295902 7918 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
CDC42BPAQ5VT25 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
CDC42BPAQ5VT25 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC8.37□□□□□ -1.07
CDC42BPAQ5VT25 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC8.37□□□□□ -1.07
CDC42BPAQ5VT25 DBIP1-201ENST00000401435 260 ntBASIC8.37□□□□□ -1.07
CDC42BPAQ5VT25 RNA5SP487-201ENST00000410186 122 ntBASIC8.37□□□□□ -1.07
CDC42BPAQ5VT25 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC8.37□□□□□ -1.07
CDC42BPAQ5VT25 VN1R21P-201ENST00000426703 765 ntBASIC8.37□□□□□ -1.07
CDC42BPAQ5VT25 RHOT1P3-201ENST00000436571 331 ntBASIC8.37□□□□□ -1.07
CDC42BPAQ5VT25 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC8.37□□□□□ -1.07
CDC42BPAQ5VT25 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC8.37□□□□□ -1.07
CDC42BPAQ5VT25 MEMO1P4-201ENST00000453590 386 ntBASIC8.37□□□□□ -1.07
CDC42BPAQ5VT25 SLC25A51P1-201ENST00000468432 871 ntBASIC8.37□□□□□ -1.07
CDC42BPAQ5VT25 RNA5SP228-201ENST00000516232 133 ntBASIC8.37□□□□□ -1.07
CDC42BPAQ5VT25 RN7SKP66-201ENST00000516681 231 ntBASIC8.37□□□□□ -1.07
CDC42BPAQ5VT25 MAL2-208ENST00000523307 556 ntTSL 4 BASIC8.37□□□□□ -1.07
CDC42BPAQ5VT25 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC8.37□□□□□ -1.07
CDC42BPAQ5VT25 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC8.37□□□□□ -1.07
CDC42BPAQ5VT25 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
CDC42BPAQ5VT25 UTY-214ENST00000617789 6682 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
CDC42BPAQ5VT25 AC009948.3-201ENST00000603415 1798 ntBASIC8.37□□□□□ -1.07
CDC42BPAQ5VT25 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC8.37□□□□□ -1.07
CDC42BPAQ5VT25 FBXO40-201ENST00000338040 5929 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
CDC42BPAQ5VT25 MT-RNR2-201ENST00000387347 1559 ntBASIC8.37□□□□□ -1.07
CDC42BPAQ5VT25 TLN2-209ENST00000561311 11880 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
CDC42BPAQ5VT25 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
CDC42BPAQ5VT25 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
CDC42BPAQ5VT25 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC8.37□□□□□ -1.07
CDC42BPAQ5VT25 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC8.37□□□□□ -1.07
CDC42BPAQ5VT25 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC8.37□□□□□ -1.07
CDC42BPAQ5VT25 ERG-202ENST00000398897 4651 ntTSL 5 BASIC8.37□□□□□ -1.07
CDC42BPAQ5VT25 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC8.37□□□□□ -1.07
CDC42BPAQ5VT25 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC8.37□□□□□ -1.07
CDC42BPAQ5VT25 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
CDC42BPAQ5VT25 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC8.37□□□□□ -1.07
CDC42BPAQ5VT25 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
CDC42BPAQ5VT25 RNU6ATAC21P-201ENST00000408656 126 ntBASIC8.37□□□□□ -1.07
CDC42BPAQ5VT25 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC8.37□□□□□ -1.07
CDC42BPAQ5VT25 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC8.37□□□□□ -1.07
CDC42BPAQ5VT25 TMEM183AP1-205ENST00000432739 290 ntBASIC8.37□□□□□ -1.07
CDC42BPAQ5VT25 GAPDHP25-201ENST00000447061 1001 ntBASIC8.37□□□□□ -1.07
CDC42BPAQ5VT25 RPS3AP41-201ENST00000462701 778 ntBASIC8.37□□□□□ -1.07
CDC42BPAQ5VT25 RPS18P6-201ENST00000476880 458 ntBASIC8.37□□□□□ -1.07
CDC42BPAQ5VT25 AC083982.1-201ENST00000485679 344 ntBASIC8.37□□□□□ -1.07
CDC42BPAQ5VT25 RPL17P2-201ENST00000491913 451 ntBASIC8.37□□□□□ -1.07
CDC42BPAQ5VT25 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC8.37□□□□□ -1.07
CDC42BPAQ5VT25 AC092593.2-201ENST00000513866 913 ntBASIC8.37□□□□□ -1.07
CDC42BPAQ5VT25 AC078899.1-201ENST00000521432 1185 ntBASIC8.37□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms