Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RFX4Q33E94 AL162456.1-201ENST00000634535 2006 ntBASIC5.37□□□□□ -1.55
RFX4Q33E94 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RFX4Q33E94 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC5.37□□□□□ -1.55
RFX4Q33E94 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.37□□□□□ -1.55
RFX4Q33E94 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC5.37□□□□□ -1.55
RFX4Q33E94 AC010740.1-201ENST00000417035 684 ntBASIC5.37□□□□□ -1.55
RFX4Q33E94 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC5.37□□□□□ -1.55
RFX4Q33E94 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RFX4Q33E94 VN1R20P-201ENST00000425215 966 ntBASIC5.37□□□□□ -1.55
RFX4Q33E94 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC5.37□□□□□ -1.55
RFX4Q33E94 AL356121.1-201ENST00000442911 156 ntBASIC5.37□□□□□ -1.55
RFX4Q33E94 TRIM60P16-201ENST00000444048 694 ntBASIC5.37□□□□□ -1.55
RFX4Q33E94 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RFX4Q33E94 AC002553.3-201ENST00000453002 341 ntBASIC5.37□□□□□ -1.55
RFX4Q33E94 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC5.37□□□□□ -1.55
RFX4Q33E94 AC083899.1-201ENST00000454465 3819 ntBASIC5.37□□□□□ -1.55
RFX4Q33E94 AC099670.1-201ENST00000455141 783 ntBASIC5.37□□□□□ -1.55
RFX4Q33E94 AC004890.1-201ENST00000461005 181 ntBASIC5.37□□□□□ -1.55
RFX4Q33E94 RPS7P10-201ENST00000464254 603 ntBASIC5.37□□□□□ -1.55
RFX4Q33E94 PSAT1P4-201ENST00000466500 526 ntBASIC5.37□□□□□ -1.55
RFX4Q33E94 H3F3AP5-201ENST00000475267 429 ntBASIC5.37□□□□□ -1.55
RFX4Q33E94 SNRPCP11-201ENST00000492453 205 ntBASIC5.37□□□□□ -1.55
RFX4Q33E94 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RFX4Q33E94 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.37□□□□□ -1.55
RFX4Q33E94 ZNF519P4-201ENST00000514008 125 ntBASIC5.37□□□□□ -1.55
RFX4Q33E94 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.37□□□□□ -1.55
RFX4Q33E94 AL359219.2-201ENST00000555184 348 ntBASIC5.37□□□□□ -1.55
RFX4Q33E94 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.37□□□□□ -1.55
RFX4Q33E94 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.37□□□□□ -1.55
RFX4Q33E94 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.37□□□□□ -1.55
RFX4Q33E94 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC5.37□□□□□ -1.55
RFX4Q33E94 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
RFX4Q33E94 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
RFX4Q33E94 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.37□□□□□ -1.55
RFX4Q33E94 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC5.37□□□□□ -1.55
RFX4Q33E94 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.37□□□□□ -1.55
RFX4Q33E94 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RFX4Q33E94 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
RFX4Q33E94 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RFX4Q33E94 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RFX4Q33E94 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
RFX4Q33E94 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.37□□□□□ -1.55
RFX4Q33E94 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
RFX4Q33E94 USP40-202ENST00000409945 1946 ntTSL 2 BASIC5.36□□□□□ -1.55
RFX4Q33E94 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
RFX4Q33E94 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RFX4Q33E94 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
RFX4Q33E94 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.36□□□□□ -1.55
RFX4Q33E94 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RFX4Q33E94 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.36□□□□□ -1.55
RFX4Q33E94 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RFX4Q33E94 AL132875.1-201ENST00000403623 949 ntBASIC5.36□□□□□ -1.55
RFX4Q33E94 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC5.36□□□□□ -1.55
RFX4Q33E94 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC5.36□□□□□ -1.55
RFX4Q33E94 GAPDHP75-201ENST00000433910 943 ntBASIC5.36□□□□□ -1.55
RFX4Q33E94 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC5.36□□□□□ -1.55
RFX4Q33E94 AC015983.1-201ENST00000441577 373 ntBASIC5.36□□□□□ -1.55
RFX4Q33E94 FTLP8-201ENST00000446770 267 ntBASIC5.36□□□□□ -1.55
RFX4Q33E94 AC004129.2-201ENST00000457229 287 ntBASIC5.36□□□□□ -1.55
RFX4Q33E94 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC5.36□□□□□ -1.55
RFX4Q33E94 RPS17P5-201ENST00000498293 408 ntBASIC5.36□□□□□ -1.55
RFX4Q33E94 AC105384.2-201ENST00000508433 640 ntBASIC5.36□□□□□ -1.55
RFX4Q33E94 CR383658.1-201ENST00000514609 734 ntBASIC5.36□□□□□ -1.55
RFX4Q33E94 SEPT10P1-201ENST00000517342 1162 ntBASIC5.36□□□□□ -1.55
RFX4Q33E94 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC5.36□□□□□ -1.55
RFX4Q33E94 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RFX4Q33E94 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RFX4Q33E94 AC009852.2-201ENST00000567898 485 ntBASIC5.36□□□□□ -1.55
RFX4Q33E94 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RFX4Q33E94 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.36□□□□□ -1.55
RFX4Q33E94 WBP1LP11-201ENST00000586141 328 ntBASIC5.36□□□□□ -1.55
RFX4Q33E94 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RFX4Q33E94 AL080312.2-201ENST00000613001 630 ntBASIC5.36□□□□□ -1.55
RFX4Q33E94 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.36□□□□□ -1.55
RFX4Q33E94 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RFX4Q33E94 RFPL4AP6-201ENST00000616792 846 ntBASIC5.36□□□□□ -1.55
RFX4Q33E94 AC138965.3-201ENST00000623875 498 ntBASIC5.36□□□□□ -1.55
RFX4Q33E94 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.36□□□□□ -1.55
RFX4Q33E94 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RFX4Q33E94 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.36□□□□□ -1.55
RFX4Q33E94 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.36□□□□□ -1.55
RFX4Q33E94 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
RFX4Q33E94 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RFX4Q33E94 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.36□□□□□ -1.55
RFX4Q33E94 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RFX4Q33E94 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
RFX4Q33E94 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
RFX4Q33E94 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RFX4Q33E94 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RFX4Q33E94 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.35□□□□□ -1.55
RFX4Q33E94 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.35□□□□□ -1.55
RFX4Q33E94 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RFX4Q33E94 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.35□□□□□ -1.55
RFX4Q33E94 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.35□□□□□ -1.55
RFX4Q33E94 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RFX4Q33E94 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RFX4Q33E94 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.35□□□□□ -1.55
RFX4Q33E94 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC5.35□□□□□ -1.55
RFX4Q33E94 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms